Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G493100.1 | Wheat | cytosol | 90.73 | 84.89 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 89.75 | 83.97 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 88.48 | 82.57 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 70.22 | 67.39 |
| Os03t0401200-01 | Rice | cytosol | 66.85 | 63.64 |
| EES07899 | Sorghum | cytosol | 61.8 | 59.86 |
| Zm00001d025584_P001 | Maize | cytosol | 60.53 | 58.8 |
| Zm00001d025585_P001 | Maize | cytosol | 60.25 | 58.53 |
| EES10933 | Sorghum | cytosol | 56.6 | 55.66 |
| Bra020958.1-P | Field mustard | cytosol | 7.72 | 53.92 |
| CDX76476 | Canola | cytosol | 7.72 | 53.92 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 17.98 | 52.89 |
| PGSC0003DMT400039473 | Potato | nucleus | 10.25 | 49.32 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 11.52 | 47.13 |
| Bra031906.1-P | Field mustard | cytosol | 6.04 | 46.74 |
| CDY31307 | Canola | cytosol | 6.04 | 46.74 |
| Solyc03g019630.1.1 | Tomato | nucleus | 10.11 | 46.15 |
| Bra020957.1-P | Field mustard | cytosol | 13.2 | 45.63 |
| CDX99361 | Canola | cytosol | 9.27 | 45.21 |
| CDX76475 | Canola | cytosol | 13.06 | 45.15 |
| Solyc03g007280.2.1 | Tomato | cytosol | 11.94 | 43.59 |
| CDY27107 | Canola | nucleus | 21.21 | 41.26 |
| KRG89459 | Soybean | cytosol | 6.18 | 40.37 |
| Bra038959.1-P | Field mustard | nucleus | 21.63 | 40.0 |
| CDY12382 | Canola | nucleus | 20.51 | 39.89 |
| KRH64496 | Soybean | nucleus | 38.2 | 39.31 |
| KRH53452 | Soybean | cytosol | 38.06 | 39.16 |
| AT5G37380.6 | Thale cress | nucleus | 22.89 | 37.82 |
| CDY09330 | Canola | cytosol | 11.8 | 37.33 |
| Bra003079.1-P | Field mustard | cytosol | 37.08 | 37.24 |
| CDY19683 | Canola | cytosol | 36.24 | 37.23 |
| CDY49460 | Canola | nucleus | 33.99 | 37.12 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 41.99 | 36.6 |
| CDX76473 | Canola | cytosol | 12.36 | 36.36 |
| CDX76474 | Canola | cytosol | 12.22 | 36.25 |
| CDX78942 | Canola | cytosol | 15.45 | 35.95 |
| PGSC0003DMT400023514 | Potato | cytosol | 37.08 | 35.92 |
| CDY60890 | Canola | cytosol | 12.08 | 35.54 |
| KRH16532 | Soybean | cytosol | 38.34 | 35.45 |
| KRH09248 | Soybean | nucleus | 38.62 | 35.3 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 34.83 | 35.13 |
| CDX99362 | Canola | nucleus | 14.04 | 35.09 |
| PGSC0003DMT400059130 | Potato | cytosol | 38.06 | 34.83 |
| AT5G53150.3 | Thale cress | cytosol | 36.66 | 34.57 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 12.22 | 34.52 |
| KRH18160 | Soybean | nucleus | 37.36 | 34.5 |
| Solyc01g044270.2.1 | Tomato | cytosol | 37.5 | 34.32 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 35.39 | 33.92 |
| KRH38748 | Soybean | nucleus | 38.62 | 33.87 |
| Bra034258.1-P | Field mustard | cytosol | 29.35 | 33.76 |
| KRH14137 | Soybean | nucleus | 33.43 | 33.66 |
| KRH73997 | Soybean | nucleus | 32.87 | 33.19 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 32.3 | 33.14 |
| CDY35353 | Canola | cytosol | 28.93 | 33.07 |
| CDX99360 | Canola | cytosol | 15.45 | 33.03 |
| CDY60893 | Canola | cytosol | 7.3 | 32.7 |
| CDY60894 | Canola | cytosol | 7.3 | 32.7 |
| CDX76994 | Canola | nucleus | 26.69 | 32.65 |
| Bra020955.1-P | Field mustard | cytosol | 12.78 | 32.27 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 32.72 | 32.09 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.69 | 31.36 |
| Bra007790.1-P | Field mustard | nucleus | 25.42 | 30.57 |
| CDY11521 | Canola | nucleus | 25.42 | 30.57 |
| CDX76752 | Canola | nucleus | 26.54 | 30.53 |
| AT2G25560.1 | Thale cress | cytosol | 27.81 | 30.18 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 37.36 | 30.02 |
| Bra020956.1-P | Field mustard | nucleus | 14.61 | 29.8 |
| PGSC0003DMT400039476 | Potato | nucleus | 33.43 | 29.57 |
| CDY12569 | Canola | cytosol | 14.61 | 29.05 |
| Bra040300.1-P | Field mustard | cytosol | 15.03 | 29.0 |
| Bra013179.1-P | Field mustard | nucleus | 28.09 | 28.86 |
| CDX93081 | Canola | nucleus | 28.09 | 28.86 |
| CDY15046 | Canola | nucleus | 27.95 | 28.84 |
| AT2G05230.1 | Thale cress | cytosol | 28.51 | 28.75 |
| AT2G05250.1 | Thale cress | cytosol | 28.51 | 28.75 |
| Bra035378.1-P | Field mustard | cytosol | 27.67 | 28.63 |
| PGSC0003DMT400048481 | Potato | cytosol | 31.18 | 28.35 |
| Solyc05g040050.1.1 | Tomato | nucleus | 31.04 | 28.22 |
| PGSC0003DMT400015678 | Potato | nucleus | 30.76 | 27.79 |
| KRH54176 | Soybean | nucleus | 30.9 | 27.74 |
| CDY47298 | Canola | cytosol | 22.75 | 27.74 |
| CDX74632 | Canola | cytosol | 22.75 | 27.6 |
| AT4G19580.1 | Thale cress | cytosol | 12.08 | 27.56 |
| KRH63773 | Soybean | nucleus | 31.46 | 27.55 |
| Solyc07g047690.1.1 | Tomato | nucleus | 30.2 | 27.28 |
| AT5G50115.1 | Thale cress | cytosol | 18.26 | 26.8 |
| Solyc03g019640.1.1 | Tomato | nucleus | 33.85 | 25.94 |
| AT5G35753.1 | Thale cress | cytosol | 15.45 | 25.64 |
| Bra013404.1-P | Field mustard | nucleus | 15.59 | 24.89 |
| Bra013403.1-P | Field mustard | nucleus | 18.26 | 23.99 |
| CDX78941 | Canola | nucleus | 17.98 | 23.19 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.34 | 22.22 |
| AT5G62780.1 | Thale cress | cytosol | 6.18 | 21.26 |
| AT4G19570.1 | Thale cress | nucleus | 16.01 | 20.43 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 5.9 | 19.27 |
| PGSC0003DMT400092645 | Potato | cytosol | 3.09 | 17.05 |
| PGSC0003DMT400085016 | Potato | cytosol | 3.09 | 16.92 |
| PGSC0003DMT400092668 | Potato | cytosol | 3.51 | 16.89 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 22.61 | 16.5 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 6.32 | 16.36 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 20.08 | 15.96 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 22.33 | 15.38 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 6.04 | 15.09 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 23.74 | 14.18 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 20.79 | 13.49 |
| PGSC0003DMT400096427 | Potato | cytosol | 10.96 | 12.68 |
| PGSC0003DMT400080343 | Potato | cytosol | 10.96 | 12.64 |
| TraesCS3B01G475500.1 | Wheat | cytosol | 13.2 | 12.48 |
| Solyc01g057750.1.1 | Tomato | cytosol | 10.67 | 12.26 |
| Solyc07g039220.1.1 | Tomato | cytosol | 6.04 | 12.18 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 12.22 | 10.07 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 12.64 | 9.79 |
| Bra002184.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G319100.1 | EnsemblPlantsGene:TraesCS4B01G319100 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| TIGR:cd06257 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:609496367..609498836
Molecular Weight (calculated)
77376.3 Da
IEP (calculated)
9.406
GRAVY (calculated)
-0.641
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKDEALR AKEIAERKFQ SRDLQGAKKF ALKAKALFPD LEGIVQMITT LDVYLTSEVK IAGGKDWYSI LSVDMSADDE TLKKQYRKLV LQLHPDKNKS
101: VGAEGAFQMV QEAWTVLSDK TKRALFDQKM KLIAMQQRTS QSNKTSAANG FEHFAAKAPA SKASANKEKT GSATSXXXXX XXXXXXXXXX XXXPPPPPQR
201: PLPRHQAAAP APPPAAQPTF WTSCNRCKMN FEYLREYLNR NLLCPSCREP FIAKEVPMPP PEVVQAVRDS NIRGATEDAS TGRKFQWGLF SRTAGPASAT
301: ASSAAGVQAA NMVQQTYEKV KREREEAQAA ARREEALQRK HNPLKRKGNV SENVNHGMGD VASGKKMKTV GNDAGVGSSS ILSGPWANYV GTQGGTIPFS
401: TNSGAFEFQG ANGVIPNWRP RPSTRISITR TFSKKDIRSI LIDKMKSDLM ENLKEIRSKP LQVTVNGKAS EKHVVNEHVE GNETLASDDS TANKDVCADP
501: EEKGSANSAD AENEDDNTFS YTVPDPDFHD FDKDRTEESF QSDQIWASYD DEDGMPRYYA YIQKVISLTP FKVKISYLAS RTNSEFGPLN WASSGFIKTC
601: GDFRIGKYET VDIINMFSHQ IKWEKGPRGV VKIYPRKGDI WALYRNWSPD WNGDTPDNVL HVYDLVEFSS IIRTGMSSRG FQKERCFGFH IRFPFTGCQG
701: KKLQMSPKVA MR
101: VGAEGAFQMV QEAWTVLSDK TKRALFDQKM KLIAMQQRTS QSNKTSAANG FEHFAAKAPA SKASANKEKT GSATSXXXXX XXXXXXXXXX XXXPPPPPQR
201: PLPRHQAAAP APPPAAQPTF WTSCNRCKMN FEYLREYLNR NLLCPSCREP FIAKEVPMPP PEVVQAVRDS NIRGATEDAS TGRKFQWGLF SRTAGPASAT
301: ASSAAGVQAA NMVQQTYEKV KREREEAQAA ARREEALQRK HNPLKRKGNV SENVNHGMGD VASGKKMKTV GNDAGVGSSS ILSGPWANYV GTQGGTIPFS
401: TNSGAFEFQG ANGVIPNWRP RPSTRISITR TFSKKDIRSI LIDKMKSDLM ENLKEIRSKP LQVTVNGKAS EKHVVNEHVE GNETLASDDS TANKDVCADP
501: EEKGSANSAD AENEDDNTFS YTVPDPDFHD FDKDRTEESF QSDQIWASYD DEDGMPRYYA YIQKVISLTP FKVKISYLAS RTNSEFGPLN WASSGFIKTC
601: GDFRIGKYET VDIINMFSHQ IKWEKGPRGV VKIYPRKGDI WALYRNWSPD WNGDTPDNVL HVYDLVEFSS IIRTGMSSRG FQKERCFGFH IRFPFTGCQG
701: KKLQMSPKVA MR
001: MECNKDEATR AKEIAENKFK MKDIAGAKKF ALKAQNLYPE IEGVSQMLAT LDVYIAAENK VNEDVDWYGI LNASPRDDDE TLKRKYRKLA LMLHPDKNKS
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R
Arabidopsis Description
At5g37380/MNJ8_170 [Source:UniProtKB/TrEMBL;Acc:Q9FHS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.