Factsheet for Solyc03g019640.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039476	Potato	nucleus	79.33	91.55
Solyc03g019630.1.1	Tomato	nucleus	11.95	71.15
GSMUA_Achr8P00660_001	Banana	cytosol	31.86	49.17
Solyc03g007280.2.1	Tomato	cytosol	9.04	43.08
GSMUA_Achr11P...	Banana	cytosol	21.74	40.24
GSMUA_Achr6P12230_001	Banana	nucleus	25.08	40.17
GSMUA_Achr2P21160_001	Banana	cytosol	23.25	40.15
GSMUA_Achr10P...	Banana	cytosol	26.26	39.8
VIT_17s0000g01150.t01	Wine grape	nucleus	37.89	39.73
Os03t0401200-01	Rice	cytosol	31.43	39.04
KRH54176	Soybean	nucleus	33.05	38.71
TraesCS2D01G283100.2	Wheat	cytosol	29.92	37.93
EES10633	Sorghum	cytosol	29.92	37.82
TraesCS2A01G284200.2	Wheat	cytosol	29.82	37.79
Zm00001d025238_P001	Maize	cytosol	29.82	37.74
Zm00001d025584_P001	Maize	cytosol	29.71	37.65
Zm00001d003948_P001	Maize	cytosol	29.82	37.64
OQU85000	Sorghum	cytosol	29.39	37.5
Os02t0510000-01	Rice	cytosol	29.6	37.47
TraesCS2B01G301100.1	Wheat	cytosol	28.42	37.39
KRH63773	Soybean	nucleus	32.72	37.39
Zm00001d025585_P001	Maize	cytosol	29.49	37.38
TraesCS3B01G607500.1	Wheat	cytosol	29.82	37.33
GSMUA_Achr3P02570_001	Banana	nucleus	20.99	37.28
TraesCS3A01G536400.1	Wheat	cytosol	29.39	36.79
EES07899	Sorghum	cytosol	29.06	36.73
TraesCS3D01G541800.1	Wheat	cytosol	29.39	36.6
TraesCS5A01G493100.1	Wheat	cytosol	29.92	36.53
Solyc01g044270.2.1	Tomato	cytosol	30.57	36.5
Zm00001d050565_P001	Maize	cytosol	25.3	36.49
TraesCS4D01G315600.1	Wheat	cytosol	29.82	36.4
EES10933	Sorghum	cytosol	27.45	35.22
Os04t0388800-01	Rice	nucleus	22.39	34.78
TraesCS3B01G470100.1	Wheat	nucleus	26.59	34.02
TraesCS4B01G319100.1	Wheat	cytosol	25.94	33.85
Os01t0923800-01	Rice	nucleus	26.7	33.33
TraesCS3A01G435100.1	Wheat	nucleus	27.02	31.73
Solyc05g040050.1.1	Tomato	nucleus	26.37	31.29
KXG34016	Sorghum	nucleus	27.66	31.0
Zm00001d011997_P001	Maize	nucleus	27.34	30.9
Solyc01g057670.1.1	Tomato	mitochondrion	4.63	30.71
Solyc07g047690.1.1	Tomato	nucleus	25.83	30.46
Solyc10g007630.1.1	Tomato	cytosol	14.42	27.57
Solyc08g029220.1.1	Tomato	nucleus	21.42	25.22
Solyc01g057650.1.1	Tomato	cytosol	4.41	23.98
Solyc01g067780.1.1	Tomato	cytosol	21.31	21.93
Solyc01g098310.1.1	Tomato	cytosol	10.33	21.05
Solyc01g098250.2.1	Tomato	nucleus	21.74	20.34
Solyc01g057750.1.1	Tomato	cytosol	13.35	20.0
Solyc07g039220.1.1	Tomato	cytosol	7.53	19.83
Solyc08g005300.1.1	Tomato	nucleus	19.05	19.41
Solyc01g065570.2.1	Tomato	cytosol	4.95	19.33
Solyc01g098330.1.1	Tomato	nucleus	7.64	17.32
Solyc01g098340.2.1	Tomato	cytosol	11.41	13.25
Solyc01g067770.1.1	Tomato	extracellular, vacuole	2.69	9.16

Protein Annotations

EnsemblPlants:Solyc03g019640.1.1	EnsemblPlantsGene:Solyc03g019640.1	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PANTHER:PTHR44137:SF5	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI000276870F	UniProt:K4BET6	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3:+:61485874..61492187

Molecular Weight (calculated)

104298.0 Da

IEP (calculated)

9.796

GRAVY (calculated)

-0.522

Length

929 amino acids

Sequence
(BLAST)

001: MECNKDEAIR AKEIAEQKLT MKDITGAQKF ALKAQNLFPG LDGLSQFLEV VNVYVAHEKK TDGEVDFYSV LSVEPSAEEE TIRKHYRRLA LALHPDKNHS
101: VGADGAFKII SEAWNILSDK SKRMIYDSKR ALRNASMQAN QHGFSNFSMS PASARKSTNA NFQPVPVAPQ SSKVEAFWTL CNLCQIRYEY LKIHRNKIIM
201: CPKCHQPFHA REVGAPVKDQ GSTFRWPSRQ QQQGTKSAAN ESSASGVSTA SNSEQTGYSG FGSTVGEKTQ QDRIFKKRDA NGAQAATAKR AAHPGQSAGG
301: ISKRTHAEAA SSAANPAFRK KSNPFLKTDA GFVPDSVYSS SKADRLIKRR RTAELKSKSQ GAGTINDMAA KGGSSQGNIH GNENGVLRAE RVAAVGSNKP
401: RSSAELSNIE IRNMLMKKAR MEIKKKLKEW STTGASRTSS KKEKEVEMKK QIIKNDLRRN KNKAAHDVVV DPKILRKKEN LPVFSAPTDL ESEAKSMTVP
501: DPDFHDFDKD RMEQSFHDKQ VWAAYDNDDG MTRYYALIHK VISRKPFEVQ LSWLNSRNTS EFGPMNWIGS GFLKTCGNFR IGRHEVNKTL NSFSHKVKWA
601: KGVGGVIQIF PQKGDVWALY RYWSPHWNEL TPDDMIHYYD VVEVLGDYTE KEGVTVAPLV KVAGFTSVFR QRLDPKYLLR IPREEMFRFS HQVPSYLLTD
701: QEAPNAPTGC WELDPAALPL EFLRVMTDTE IEARGKVADT SKLERTCGES KEKEKSYVVG DNSVTKGEET PRDSMSIVKQ PMVTYSRKKK EKAEMIELDP
801: IFSCSSPEFS ILGTVRVVMA LQPGSRRNLY FFLASPKYEL QFLFVKMLMF FDPRHEVVRD CGGLLLSKLL LSVKLWDANL KMVIGSSCRD NSCCLSLPLV
901: EVWSELLWIW MLGWASRISN AVPCGLSCS

Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.