Factsheet for GSMUA_Achr8P00660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
extracellular 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P11020_001
GSMUA_Achr4P16510_001
GSMUA_Achr8P34050_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	GSMUA_Achr4P11020_001	AT4G36690.1	21798944
AT2G05230.1	GSMUA_Achr4P16510_001	AT4G36690.1	21798944
AT2G05230.1	GSMUA_Achr8P34050_001	AT5G60340.1	21798944
AT2G05250.1	GSMUA_Achr4P11020_001	AT4G36690.1	21798944
AT2G05250.1	GSMUA_Achr4P16510_001	AT4G36690.1	21798944
AT2G05250.1	GSMUA_Achr8P34050_001	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g01140.t01	Wine grape	cytosol	23.42	55.95
Bra020958.1-P	Field mustard	cytosol	9.14	53.92
CDX76476	Canola	cytosol	9.14	53.92
VIT_01s0010g03770.t01	Wine grape	cytosol	21.43	53.31
PGSC0003DMT400039473	Potato	nucleus	12.96	52.7
GSMUA_Achr10P...	Banana	cytosol	53.49	52.53
GSMUA_Achr11P...	Banana	cytosol	43.69	52.39
Solyc03g019630.1.1	Tomato	nucleus	12.79	49.36
Solyc03g007280.2.1	Tomato	cytosol	15.12	46.67
GSMUA_Achr2P21160_001	Banana	cytosol	41.53	46.47
CDX99361	Canola	cytosol	11.13	45.89
CDY60891	Canola	cytosol, mitochondrion, nucleus	13.12	45.4
GSMUA_Achr6P12230_001	Banana	nucleus	43.69	45.34
GSMUA_Achr3P02570_001	Banana	nucleus	39.37	45.32
KRG89459	Soybean	cytosol	8.14	44.95
KRH53452	Soybean	cytosol	51.16	44.51
KRH64496	Soybean	nucleus	50.83	44.22
VIT_01s0010g03760.t01	Wine grape	cytosol	59.3	43.7
Bra031906.1-P	Field mustard	cytosol	6.64	43.48
CDY31307	Canola	cytosol	6.64	43.48
VIT_16s0050g02590.t01	Wine grape	cytosol	53.16	43.07
Bra020957.1-P	Field mustard	cytosol	14.62	42.72
CDX76475	Canola	cytosol	14.45	42.23
KRH09248	Soybean	nucleus	52.99	40.95
PGSC0003DMT400023514	Potato	cytosol	49.83	40.82
KRH38748	Soybean	nucleus	53.32	39.53
KRH16532	Soybean	cytosol	50.17	39.22
KRH18160	Soybean	nucleus	50.0	39.04
Bra034258.1-P	Field mustard	cytosol	39.87	38.77
PGSC0003DMT400059130	Potato	cytosol	50.0	38.69
CDY49460	Canola	nucleus	41.53	38.34
CDY19683	Canola	cytosol	43.85	38.1
Solyc01g044270.2.1	Tomato	cytosol	49.0	37.92
CDY35353	Canola	cytosol	39.2	37.88
CDX76994	Canola	nucleus	36.54	37.8
CDY09330	Canola	cytosol	14.12	37.78
CDY60893	Canola	cytosol	9.97	37.74
CDY60894	Canola	cytosol	9.97	37.74
CDX99362	Canola	nucleus	17.77	37.54
VIT_12s0057g00710.t01	Wine grape	cytosol	43.19	37.46
AT2G25560.1	Thale cress	cytosol	40.53	37.2
Bra003079.1-P	Field mustard	cytosol	43.19	36.67
PGSC0003DMT400039476	Potato	nucleus	49.0	36.65
CDX76473	Canola	cytosol	14.62	36.36
CDY12382	Canola	nucleus	21.59	35.52
AT5G53150.3	Thale cress	cytosol	44.52	35.5
PGSC0003DMT400085016	Potato	cytosol	7.64	35.38
KRH14137	Soybean	nucleus	41.36	35.22
KRH73997	Soybean	nucleus	41.03	35.04
CDY27107	Canola	nucleus	21.26	34.97
VIT_17s0000g01150.t01	Wine grape	nucleus	51.0	34.65
KRH54176	Soybean	nucleus	44.52	33.8
Bra007790.1-P	Field mustard	nucleus	33.22	33.78
CDY11521	Canola	nucleus	33.22	33.78
CDX76752	Canola	nucleus	34.72	33.76
CDX78942	Canola	cytosol	17.11	33.66
AT5G37380.6	Thale cress	nucleus	24.09	33.64
AT5G50115.1	Thale cress	cytosol	27.08	33.61
Bra038959.1-P	Field mustard	nucleus	21.43	33.51
CDX76474	Canola	cytosol	13.29	33.33
KRH63773	Soybean	nucleus	44.85	33.21
Bra035378.1-P	Field mustard	cytosol	37.87	33.14
CDY60010	Canola	cytosol, mitochondrion, nucleus	11.96	32.73
CDY60890	Canola	cytosol	13.12	32.64
PGSC0003DMT400015678	Potato	nucleus	42.19	32.23
Solyc03g019640.1.1	Tomato	nucleus	49.17	31.86
Solyc07g047690.1.1	Tomato	nucleus	41.69	31.85
CDX99360	Canola	cytosol	17.61	31.83
Solyc05g040050.1.1	Tomato	nucleus	41.2	31.67
Bra013179.1-P	Field mustard	nucleus	36.38	31.6
CDX93081	Canola	nucleus	36.38	31.6
Bra020955.1-P	Field mustard	cytosol	14.78	31.56
PGSC0003DMT400048481	Potato	cytosol	41.03	31.55
CDY47298	Canola	cytosol	30.56	31.51
CDY15046	Canola	nucleus	36.05	31.45
CDX74632	Canola	cytosol	30.56	31.35
GSMUA_Achr4P05630_001	Banana	cytosol	26.08	31.27
AT2G05230.1	Thale cress	cytosol	36.54	31.16
AT2G05250.1	Thale cress	cytosol	36.54	31.16
PGSC0003DMT400086295	Potato	mitochondrion	11.13	30.73
CDY12569	Canola	cytosol	17.44	29.33
AT5G35753.1	Thale cress	cytosol	20.76	29.14
PGSC0003DMT400092645	Potato	cytosol	6.15	28.68
Bra040300.1-P	Field mustard	cytosol	17.44	28.46
PGSC0003DMT400092668	Potato	cytosol	6.64	27.03
Bra020956.1-P	Field mustard	nucleus	15.45	26.65
GSMUA_Achr11P...	Banana	cytosol	10.13	26.64
AT4G19580.1	Thale cress	cytosol	13.62	26.28
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	11.46	24.21
Bra013404.1-P	Field mustard	nucleus	17.28	23.32
Bra013403.1-P	Field mustard	nucleus	20.93	23.25
GSMUA_Achr3P24140_001	Banana	nucleus	8.8	23.04
CDX78941	Canola	nucleus	21.1	23.01
AT5G62780.1	Thale cress	cytosol	7.64	22.22
GSMUA_Achr2P02410_001	Banana	cytosol	28.57	22.22
AT4G19570.1	Thale cress	nucleus	20.43	22.04
GSMUA_Achr11P...	Banana	nucleus	23.09	21.25
Solyc01g057650.1.1	Tomato	cytosol	5.81	20.47
GSMUA_Achr1P24750_001	Banana	cytosol	8.14	19.92
GSMUA_Achr5P00460_001	Banana	cytosol	23.92	19.81
Solyc07g039220.1.1	Tomato	cytosol	10.96	18.7
Solyc01g057750.1.1	Tomato	cytosol	18.27	17.74
PGSC0003DMT400096427	Potato	cytosol	17.44	17.07
PGSC0003DMT400080343	Potato	cytosol	17.44	17.02
Bra002184.1-P	Field mustard	cytosol	0.66	1.53
GSMUA_Achr11P...	Banana	cytosol	0.17	0.61

Protein Annotations

EnsemblPlants:GSMUA_Achr8P00660_001	EnsemblPlants:GSMUA_Achr8T00660_001	EnsemblPlantsGene:GSMUA_Achr8G00660_001	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI0002961E2C	UniProt:M0TLG8	MapMan:35.2	:	:

Description

Putative dnaJ domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G00660_001]

Coordinates

chr8:-:597719..600279

Molecular Weight (calculated)

68397.7 Da

IEP (calculated)

6.976

GRAVY (calculated)

-0.655

Length

602 amino acids

Sequence
(BLAST)

001: MECNKDEAFR AKEIAERKFM AEDVSGAKKF ATKAQNLFPA LEGISQMIAT LDVYLASESK VFGEMNWYAV LSLNPSADED TLKKQYRKLA LQLHPDKNKS
101: IGAEGAFKLI SEAWAVLSDK SRRMIYDQKI NVKGYCQSNA ARATAHPSSQ LPKSNTFWTS CNRCKMQYEY LRLYLNHKLL CPNCHEPFIA SETVLPTSRP
201: SMRASVFQHG ANLEAQAAAR RAEAFHRKNS AMKRNIIASV KRNAASSDSL PNKRRRGNGD DVGNDNGGVC KEHNGVSGHI THLDIQNMLI EKTKLVIHSK
301: LGEWHSSTTE RKEEKESEKN RQKPSNDDKK NLINEHPGDS DNEINEPMSM DVPDSDFHDF DNDRSEKSFE SDQVWATYDE EDGMPRHYAL IQKIISFTPF
401: KVCMSFLTSK SNSEFGSLNW IASGFAKTCG DFRVGKYEVN ETINIFSHKV RWEKGSRGVI KIVPKKGEIW VLYRNWSPEW NEHTPDDVIY KYDMVEVLED
501: YSEELGVTVT PLVKVAGFKT VFHRHLDPKE VKRIQKEEMF RFSHQVPSYS LTGEEAVNAP KGCHELDPAA TPLELLQAVT EVETDADAKI ALRHTRLELL
601: DC

Best Arabidopsis Sequence Match ( AT5G53150.4 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.