Factsheet for GSMUA_Achr10P05770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P11020_001
GSMUA_Achr4P16510_001
GSMUA_Achr8P34050_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	GSMUA_Achr4P11020_001	AT4G36690.1	21798944
AT2G05230.1	GSMUA_Achr4P16510_001	AT4G36690.1	21798944
AT2G05230.1	GSMUA_Achr8P34050_001	AT5G60340.1	21798944
AT2G05250.1	GSMUA_Achr4P11020_001	AT4G36690.1	21798944
AT2G05250.1	GSMUA_Achr4P16510_001	AT4G36690.1	21798944
AT2G05250.1	GSMUA_Achr8P34050_001	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	58.56	71.51
Bra020958.1-P	Field mustard	cytosol	8.97	53.92
CDX76476	Canola	cytosol	8.97	53.92
GSMUA_Achr8P00660_001	Banana	cytosol	52.53	53.49
PGSC0003DMT400039473	Potato	nucleus	12.89	53.38
VIT_01s0010g03770.t01	Wine grape	cytosol	20.55	52.07
GSMUA_Achr3P02570_001	Banana	nucleus	44.37	52.01
GSMUA_Achr2P21160_001	Banana	cytosol	45.19	51.49
Solyc03g019630.1.1	Tomato	nucleus	12.4	48.72
Bra031906.1-P	Field mustard	cytosol	7.18	47.83
CDY31307	Canola	cytosol	7.18	47.83
Solyc03g007280.2.1	Tomato	cytosol	15.17	47.69
GSMUA_Achr6P12230_001	Banana	nucleus	45.02	47.59
CDY60891	Canola	cytosol, mitochondrion, nucleus	13.21	46.55
CDX99361	Canola	cytosol	10.6	44.52
Bra020957.1-P	Field mustard	cytosol	14.85	44.17
KRG89459	Soybean	cytosol	7.83	44.04
CDX76475	Canola	cytosol	14.68	43.69
VIT_17s0000g01140.t01	Wine grape	cytosol	17.46	42.46
KRH64496	Soybean	nucleus	47.31	41.91
KRH53452	Soybean	cytosol	46.82	41.47
VIT_01s0010g03760.t01	Wine grape	cytosol	50.57	37.94
CDY12382	Canola	nucleus	22.35	37.43
CDY09330	Canola	cytosol	13.7	37.33
CDY27107	Canola	nucleus	22.02	36.89
PGSC0003DMT400023514	Potato	cytosol	44.21	36.87
CDX76474	Canola	cytosol	14.19	36.25
KRH09248	Soybean	nucleus	45.84	36.07
CDX76473	Canola	cytosol	14.19	35.95
Bra038959.1-P	Field mustard	nucleus	22.35	35.58
KRH18160	Soybean	nucleus	44.7	35.54
PGSC0003DMT400059130	Potato	cytosol	45.02	35.48
VIT_16s0050g02590.t01	Wine grape	cytosol	42.9	35.4
KRH38748	Soybean	nucleus	46.66	35.22
KRH16532	Soybean	cytosol	44.05	35.06
Bra034258.1-P	Field mustard	cytosol	35.4	35.06
CDX99362	Canola	nucleus	16.15	34.74
Solyc01g044270.2.1	Tomato	cytosol	44.05	34.7
CDX78942	Canola	cytosol	17.29	34.64
PGSC0003DMT400085016	Potato	cytosol	7.34	34.62
CDY35353	Canola	cytosol	35.07	34.51
VIT_12s0057g00710.t01	Wine grape	cytosol	38.99	34.44
CDY49460	Canola	nucleus	36.54	34.36
AT5G37380.6	Thale cress	nucleus	24.14	34.34
CDX76994	Canola	nucleus	32.46	34.19
CDY19683	Canola	cytosol	38.34	33.91
CDY60890	Canola	cytosol	13.38	33.88
CDX99360	Canola	cytosol	18.27	33.63
CDY60893	Canola	cytosol	8.65	33.33
CDY60894	Canola	cytosol	8.65	33.33
Bra003079.1-P	Field mustard	cytosol	38.17	33.0
KRH73997	Soybean	nucleus	37.52	32.62
KRH14137	Soybean	nucleus	37.52	32.53
AT2G25560.1	Thale cress	cytosol	34.26	32.01
AT5G53150.3	Thale cress	cytosol	39.31	31.92
VIT_17s0000g01150.t01	Wine grape	nucleus	46.0	31.83
Bra020955.1-P	Field mustard	cytosol	14.36	31.21
KRH54176	Soybean	nucleus	40.29	31.15
Bra007790.1-P	Field mustard	nucleus	29.36	30.41
CDY11521	Canola	nucleus	29.36	30.41
KRH63773	Soybean	nucleus	40.29	30.38
CDX76752	Canola	nucleus	30.67	30.37
PGSC0003DMT400039476	Potato	nucleus	39.64	30.19
CDY60010	Canola	cytosol, mitochondrion, nucleus	10.77	30.0
PGSC0003DMT400015678	Potato	nucleus	37.36	29.06
PGSC0003DMT400092645	Potato	cytosol	6.04	28.68
Solyc07g047690.1.1	Tomato	nucleus	36.87	28.68
Bra035378.1-P	Field mustard	cytosol	32.14	28.63
PGSC0003DMT400048481	Potato	cytosol	36.22	28.35
Solyc05g040050.1.1	Tomato	nucleus	36.22	28.35
Bra020956.1-P	Field mustard	nucleus	15.99	28.08
CDY12569	Canola	cytosol	16.31	27.93
AT5G50115.1	Thale cress	cytosol	21.86	27.63
AT4G19580.1	Thale cress	cytosol	14.03	27.56
Bra040300.1-P	Field mustard	cytosol	16.48	27.37
AT2G05230.1	Thale cress	cytosol	31.32	27.2
AT2G05250.1	Thale cress	cytosol	31.32	27.2
Bra013179.1-P	Field mustard	nucleus	30.67	27.13
CDX93081	Canola	nucleus	30.67	27.13
CDY15046	Canola	nucleus	30.51	27.1
CDX74632	Canola	cytosol	25.61	26.75
CDY47298	Canola	cytosol	25.29	26.54
GSMUA_Achr4P05630_001	Banana	cytosol	21.7	26.49
Solyc03g019640.1.1	Tomato	nucleus	39.8	26.26
AT5G35753.1	Thale cress	cytosol	16.8	24.01
PGSC0003DMT400092668	Potato	cytosol	5.71	23.65
Bra013404.1-P	Field mustard	nucleus	17.13	23.54
Bra013403.1-P	Field mustard	nucleus	20.07	22.69
GSMUA_Achr11P...	Banana	nucleus	23.98	22.48
GSMUA_Achr11P...	Banana	cytosol	8.32	22.27
GSMUA_Achr1P24750_001	Banana	cytosol	8.81	21.95
CDX78941	Canola	nucleus	19.74	21.92
AT5G62780.1	Thale cress	cytosol	7.34	21.74
PGSC0003DMT400086295	Potato	mitochondrion	7.67	21.56
GSMUA_Achr2P02410_001	Banana	cytosol	27.08	21.45
GSMUA_Achr3P24140_001	Banana	nucleus	7.99	21.3
AT4G19570.1	Thale cress	nucleus	19.09	20.97
GSMUA_Achr5P00460_001	Banana	cytosol	24.8	20.91
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	7.83	16.84
PGSC0003DMT400096427	Potato	cytosol	14.19	14.15
PGSC0003DMT400080343	Potato	cytosol	14.19	14.1
Solyc01g057750.1.1	Tomato	cytosol	13.87	13.71
Solyc07g039220.1.1	Tomato	cytosol	7.34	12.75
Solyc01g057650.1.1	Tomato	cytosol	2.77	9.94
GSMUA_Achr11P...	Banana	cytosol	0.65	2.42
Bra002184.1-P	Field mustard	cytosol	0.98	2.29

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	ncoils:Coil	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
EnsemblPlantsGene:GSMUA_Achr10G05770_001	EnsemblPlants:GSMUA_Achr10P05770_001	EnsemblPlants:GSMUA_Achr10T05770_001	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M0RFQ4	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44137	PANTHER:PTHR44137:SF4	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000294B4B6	SEG:seg

Description

Putative dnaJ domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G05770_001]

Coordinates

chr10:+:16238531..16245008

Molecular Weight (calculated)

69801.9 Da

IEP (calculated)

5.383

GRAVY (calculated)

-0.615

Length

613 amino acids

Sequence
(BLAST)

001: MDCNKDEAVR AKEIAERKFS ERDLEGARKF AMKAQNLFPA LEGIGQMIAT LDVHVASEEK VYGEKDWYAI LSVSASADED TVKKQYRKLA LQLHPDKNKS
101: VGAEGAFQLI SEAWSVLSDK SRRTLYDQKR CIKNSTNVTP AVAHSSPEPP IPETFWTSCN KCKMQYEYLR VYLNHNLLCP NCHEPFLAKE TKSSANGFSM
201: GSSGIQNGAN LGSLNNQNFQ WGPFSRSAGV ASATASSAAA AQAANVVHQT YEKVRKEREE AQAAARREEA LHRKNKQFGA FETNRTSGVN GDFCKFRTGV
301: RHNNLGREFP HIDIRSMLIE MTKLAIHKKL EDWKSAATEK IDAKENSMSD TEQFATEKNS SNVQSSDSDN ECNEPVSIVV PDPDFHDFDN DRSEQSFESD
401: QIWATYDDED GMPRWEKGPR GVIKIVPRKG ETWALYRNWS PEWNEHTADD IIYKYDMVEV LEDYSEEQGV SIIPLVKVSG FRTIFCRHLD PMKLKRIPKE
501: EMFRFSHQVP SYLLTGEEAE NAPKGFFELD PAATPLELLQ INENKTEVAA EAVEQARLIL FTKLLLLFRL ENWCPLILLE LNFRTEERFN EYTHCLQTAD
601: NASFRDLVQW NLI

Best Arabidopsis Sequence Match ( AT5G53150.4 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.