Factsheet for Bra040300.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60010	Canola	cytosol, mitochondrion, nucleus	59.35	99.55
CDY12569	Canola	cytosol	92.95	95.81
Bra020958.1-P	Field mustard	cytosol	18.43	66.67
Bra031906.1-P	Field mustard	cytosol	13.28	53.26
Bra020957.1-P	Field mustard	cytosol	29.27	52.43
PGSC0003DMT400039473	Potato	nucleus	17.89	44.59
Solyc03g019630.1.1	Tomato	nucleus	18.16	42.95
KRG89459	Soybean	cytosol	11.65	39.45
Bra020955.1-P	Field mustard	cytosol	28.18	36.88
AT4G19570.1	Thale cress	nucleus	55.56	36.74
AT4G19580.1	Thale cress	cytosol	26.83	31.73
Bra020956.1-P	Field mustard	nucleus	29.27	30.95
Bra038959.1-P	Field mustard	nucleus	26.29	25.19
Bra013404.1-P	Field mustard	nucleus	27.37	22.65
Bra013403.1-P	Field mustard	nucleus	29.81	20.3
Bra001216.1-P	Field mustard	cytosol	10.84	17.7
GSMUA_Achr8P00660_001	Banana	cytosol	28.46	17.44
Bra003079.1-P	Field mustard	cytosol	33.06	17.21
GSMUA_Achr11P...	Banana	cytosol	23.31	17.13
GSMUA_Achr10P...	Banana	cytosol	27.37	16.48
Bra007790.1-P	Field mustard	nucleus	24.93	15.54
GSMUA_Achr2P21160_001	Banana	cytosol	22.49	15.43
Bra034258.1-P	Field mustard	cytosol	25.47	15.19
TraesCS4B01G319100.1	Wheat	cytosol	29.0	15.03
Bra040290.1-P	Field mustard	cytosol, mitochondrion	7.32	14.84
TraesCS3B01G607500.1	Wheat	cytosol	29.81	14.82
TraesCS3A01G536400.1	Wheat	cytosol	29.54	14.69
Bra035378.1-P	Field mustard	cytosol	27.37	14.68
TraesCS3D01G541800.1	Wheat	cytosol	29.54	14.61
Bra013179.1-P	Field mustard	nucleus	27.1	14.43
EES10633	Sorghum	cytosol	28.46	14.29
TraesCS4D01G315600.1	Wheat	cytosol	29.27	14.19
TraesCS5A01G493100.1	Wheat	cytosol	29.27	14.19
Os03t0401200-01	Rice	cytosol	28.73	14.17
TraesCS2B01G301100.1	Wheat	cytosol	27.1	14.16
Zm00001d025238_P001	Maize	cytosol	27.91	14.03
GSMUA_Achr6P12230_001	Banana	nucleus	21.95	13.97
Os02t0510000-01	Rice	cytosol	27.64	13.9
Zm00001d003948_P001	Maize	cytosol	27.64	13.86
GSMUA_Achr3P02570_001	Banana	nucleus	19.51	13.77
EES07899	Sorghum	cytosol	27.37	13.74
TraesCS2A01G284200.2	Wheat	cytosol	27.1	13.64
TraesCS2D01G283100.2	Wheat	cytosol	27.1	13.64
Zm00001d025585_P001	Maize	cytosol	27.1	13.64
Zm00001d025584_P001	Maize	cytosol	26.83	13.51
OQU85000	Sorghum	cytosol	26.29	13.32
EES10933	Sorghum	cytosol	25.75	13.12
Bra020757.1-P	Field mustard	nucleus	22.76	12.86
Bra017315.1-P	Field mustard	nucleus	16.26	12.58
Bra009972.1-P	Field mustard	nucleus	21.41	12.56
TraesCS3B01G470100.1	Wheat	nucleus	24.39	12.4
Os01t0923800-01	Rice	nucleus	24.66	12.23
TraesCS3A01G435100.1	Wheat	nucleus	24.39	11.38
KXG34016	Sorghum	nucleus	24.66	10.98
Zm00001d011997_P001	Maize	nucleus	24.12	10.83
Zm00001d050565_P001	Maize	cytosol	18.7	10.71
Bra005331.1-P	Field mustard	nucleus	14.09	9.9
Bra039461.1-P	Field mustard	cytosol	10.57	7.32
Os04t0388800-01	Rice	nucleus	11.65	7.19
Bra039477.1-P	Field mustard	plastid	7.86	5.39
Bra039476.1-P	Field mustard	cytosol	2.44	4.37
Bra006479.1-P	Field mustard	cytosol	6.5	4.35
Bra006473.1-P	Field mustard	plastid	7.86	4.13
Bra002183.1-P	Field mustard	nucleus	6.23	4.05
Bra001194.1-P	Field mustard	cytosol	2.17	3.96
Bra006478.1-P	Field mustard	nucleus	5.69	3.95
Bra006476.1-P	Field mustard	nucleus	5.15	3.23
Bra039474.1-P	Field mustard	nucleus	13.28	3.21
Bra024236.1-P	Field mustard	nucleus	2.71	2.72
Bra006477.1-P	Field mustard	cytosol	8.94	2.4
Bra002182.1-P	Field mustard	nucleus	4.61	1.57
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	0.27	1.54
Bra002184.1-P	Field mustard	cytosol	0.54	0.76

Protein Annotations

EnsemblPlants:Bra040300.1	EnsemblPlants:Bra040300.1-P	EnsemblPlantsGene:Bra040300	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000253EC19	UniProt:M4FGS2	MapMan:35.2	:

Description

AT4G19570 (E=4e-050) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrScaffold000196:-:865..1974

Molecular Weight (calculated)

42175.1 Da

IEP (calculated)

9.800

GRAVY (calculated)

-0.746

Length

369 amino acids

Sequence
(BLAST)

001: MERNEEEARR AMGIAEKRLL ENDYHGAKTF VNQARSLYPN LDGLQQALIM IDVYISASTR RGREADWYEI LGVDSLADDE TVKKQYKKLA LLLHPDKNKF
101: SGAEGAFKLV LEAWSQLSDH QGKHKKSGMQ KPPKPHEAAS SNRPNPKPRE PAPSNKPKPK PRHEPELTPK IEPTFWTVCS RCKTYCEFLR ADYLNKTLSC
201: PNCCRRFIAV EVIPEIINGR PVIRLSPSQE TFSSTWAYDS RKSTSQTHKR LKRWFEPKLE SDFVPREEKV RNFTFWTVCN RCKTYCRFAR SSYVNKILPC
301: PNCREDFVAN EIIPEVVNGS PVIKLTPHFR PTCKSTSGAS SFTRASASSS SAKAANRGQE SMKYWFGES

Best Arabidopsis Sequence Match ( AT4G19570.1 )
(BLAST)

001: MESNKEEAKR ALDIAEKKLS KNDYNRAKRY AKKAHRMYPN LVGLEQVLIM IDVYISATNK INGEADWYRV LGVDPLADDE AVKKRYRKLA LLLHPDKNRF
101: TGAEGAFKLI LEAWDLLSDK SQRSSYDQKR KSNQVKQRTS GMQKPKRSST PKPTESDKPA SSYGPTPPPE PRPKRRPRPN IPEPDIPMPM PTRHKPKSKP
201: DISLTTVKVG TFWTVCNRCK TYCEFMRASC LNKTVPCPNC GKYFIATVIP SELVNGRLVI RLSPCNQSTW KKASDDTSST SAMAKTVPER VKRWFDPMPE
301: MDSSTQKIGT FWTVCSRCKT HCKLVRANHL NKTFPCPNCS QEFVAAEMII EVINGGPVIK LSPSVQSNSK RTRDASSTTS ASDKAQRTAY QKEEVLKREK
401: IDPDVASAAT GENVKVAETL FKEPMTTGNE NSTTEEGIVK ESETLCKEPM TTGNENSTTE EGNVKEAETF FEEPMTTGNV KEVETLFEEP MTTDNENSTP
501: EAERLFKKPM STGDENSTHE AQRLFKKPMT TGNANSNLEA QRCFLRIWQR EMQSLLLK

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TH2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.