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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88920 Canola nucleus 100.0 100.0
PGSC0003DMT400057888 Potato cytosol 14.63 43.43
Bra002183.1-P Field mustard nucleus 41.84 43.31
Bra006479.1-P Field mustard cytosol 39.29 41.85
Bra006478.1-P Field mustard nucleus 37.59 41.54
Bra002182.1-P Field mustard nucleus 75.34 40.83
Bra039476.1-P Field mustard cytosol 13.95 39.81
Bra001194.1-P Field mustard cytosol 12.93 37.62
PGSC0003DMT400089411 Potato cytosol 13.78 36.16
Bra006473.1-P Field mustard plastid 41.67 34.85
Bra002184.1-P Field mustard cytosol 13.61 30.53
PGSC0003DMT400057894 Potato cytosol 14.8 22.42
TraesCS4A01G214500.1 Wheat nucleus 23.81 20.9
Os11t0574200-00 Rice cytosol 11.56 20.8
Bra024236.1-P Field mustard nucleus 12.93 20.65
GSMUA_Achr5P00460_001 Banana cytosol 24.66 19.95
PGSC0003DMT400057893 Potato cytosol 16.33 19.83
Solyc10g007630.1.1 Tomato cytosol 16.16 19.55
GSMUA_Achr11P... Banana nucleus 21.43 19.27
Solyc01g098340.2.1 Tomato cytosol 26.19 19.25
PGSC0003DMT400054841 Potato cytosol 16.16 19.23
GSMUA_Achr2P02410_001 Banana cytosol 24.66 18.73
Solyc01g098310.1.1 Tomato cytosol 14.29 18.42
PGSC0003DMT400057887 Potato cytosol 25.85 18.05
HORVU2Hr1G084660.1 Barley cytosol 26.19 17.7
Bra039477.1-P Field mustard plastid 15.99 17.47
Solyc01g098250.2.1 Tomato nucleus 29.25 17.32
TraesCS2B01G366100.1 Wheat cytosol 27.04 17.3
TraesCS2A01G347700.1 Wheat mitochondrion 26.87 17.19
Bra006477.1-P Field mustard cytosol 39.8 17.02
TraesCS2D01G077700.1 Wheat cytosol 24.83 16.92
HORVU2Hr1G013270.2 Barley cytosol 25.0 16.92
TraesCS2B01G095100.1 Wheat cytosol 24.83 16.9
Bra009972.1-P Field mustard nucleus 17.86 16.69
Zm00001d040846_P001 Maize cytosol 26.53 16.67
TraesCS4B01G101500.1 Wheat cytosol 25.34 16.63
HORVU6Hr1G033850.1 Barley cytosol 27.55 16.62
TraesCS6A01G167100.1 Wheat cytosol 27.55 16.6
TraesCS6B01G194500.1 Wheat cytosol 27.55 16.6
Zm00001d052947_P001 Maize plastid 24.32 16.53
Bra039461.1-P Field mustard cytosol 14.97 16.51
TraesCS6D01G155600.1 Wheat cytosol 27.38 16.5
Solyc01g098330.1.1 Tomato nucleus 11.39 16.34
Os01t0375100-01 Rice nucleus 27.89 16.27
KXG32106 Sorghum cytosol 27.72 16.12
PGSC0003DMT400057904 Potato nucleus 29.59 16.1
Os06t0535300-01 Rice nucleus 27.72 16.01
KXG28768 Sorghum nucleus 26.36 15.9
EES00793 Sorghum cytosol 26.36 15.86
KRG92798 Soybean cytosol 19.05 15.8
Bra020757.1-P Field mustard nucleus 17.52 15.77
EER88793 Sorghum cytosol 25.34 15.72
OQU83710 Sorghum cytosol 25.85 15.61
HORVU4Hr1G043860.4 Barley cytosol 25.17 15.6
Zm00001d008412_P001 Maize cytosol 26.87 15.51
Zm00001d008413_P001 Maize cytosol 26.53 15.32
Os11t0578100-00 Rice cytosol 27.38 15.29
TraesCS3A01G213800.3 Wheat nucleus 26.53 15.25
KRH68628 Soybean cytosol 27.38 15.09
TraesCS3D01G215900.1 Wheat nucleus 26.19 15.04
TraesCS3B01G244000.4 Wheat nucleus 26.19 14.89
KRG96896 Soybean cytosol 26.53 14.74
TraesCS2A01G084900.1 Wheat nucleus 25.34 14.41
PGSC0003DMT400038431 Potato nucleus 19.22 14.36
Solyc08g029220.1.1 Tomato nucleus 19.22 14.32
EER98396 Sorghum nucleus 27.72 14.29
TraesCS2A01G080400.1 Wheat cytosol 19.56 14.29
OQU83714 Sorghum cytosol, nucleus, plastid 25.51 14.2
Zm00001d019461_P002 Maize cytosol 26.87 14.16
TraesCS2D01G078000.1 Wheat cytosol 15.48 14.15
HORVU7Hr1G050080.1 Barley nucleus 24.83 14.12
Bra034258.1-P Field mustard cytosol 14.29 13.57
TraesCS2D01G082800.1 Wheat nucleus 25.34 13.56
EES09993 Sorghum nucleus 25.17 13.42
TraesCS2B01G099600.2 Wheat nucleus 25.0 13.4
HORVU3Hr1G051850.2 Barley nucleus 25.68 13.35
Bra017315.1-P Field mustard nucleus 10.71 13.21
HORVU1Hr1G008940.2 Barley nucleus 26.53 13.02
TraesCS1B01G054900.1 Wheat nucleus 26.19 12.92
TraesCS1D01G042900.1 Wheat nucleus 26.02 12.84
Bra003079.1-P Field mustard cytosol 15.48 12.84
TraesCS1A01G042500.1 Wheat nucleus 25.68 12.69
OQU83709 Sorghum cytosol 25.0 12.65
Bra005331.1-P Field mustard nucleus 11.05 12.38
Bra007790.1-P Field mustard nucleus 12.24 12.16
Bra035378.1-P Field mustard cytosol 14.12 12.06
EES08665 Sorghum nucleus 13.78 11.93
Bra041167.1-P Field mustard cytosol, nucleus, plastid 1.19 10.77
Bra013179.1-P Field mustard nucleus 12.59 10.68
Os11t0573800-00 Rice nucleus 16.16 10.35
Bra039474.1-P Field mustard nucleus 24.49 9.44
Bra040290.1-P Field mustard cytosol, mitochondrion 2.89 9.34
TraesCS2D01G077900.1 Wheat cytosol 7.65 8.33
Bra001216.1-P Field mustard cytosol 2.72 7.08
Bra013403.1-P Field mustard nucleus 4.76 5.17
Bra040300.1-P Field mustard cytosol 3.23 5.15
Bra038959.1-P Field mustard nucleus 3.06 4.68
Bra031906.1-P Field mustard cytosol 0.68 4.35
Bra020956.1-P Field mustard nucleus 2.38 4.01
Bra020958.1-P Field mustard cytosol 0.68 3.92
Bra020957.1-P Field mustard cytosol 1.36 3.88
KRH34004 Soybean cytosol 1.53 2.83
KRH34003 Soybean cytosol 1.36 2.75
Bra013404.1-P Field mustard nucleus 1.87 2.47
Bra020955.1-P Field mustard cytosol 1.02 2.13
Protein Annotations
EnsemblPlants:Bra006476.1EnsemblPlants:Bra006476.1-PEnsemblPlantsGene:Bra006476InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926
SEG:segUniParc:UPI000253FECFUniProt:M4CQI7MapMan:35.2::
Description
AT5G18730 (E=2e-110) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA03:+:3674969..3676735
Molecular Weight (calculated)
66421.6 Da
IEP (calculated)
5.080
GRAVY (calculated)
-0.598
Length
588 amino acids
Sequence
(BLAST)
001: MEETNRDGDG DGDGELYPSG VEQMPRHHGE KRKREGLVSG EREAEEVILV GDTKAIKKFG FDGGEQSSQS QMSLFSKRQA FEVQNNMNLK GSLVKEESGE
101: EPARAKQDYS TFNDFDRLRE VRNFAVGQTW ALYDDKVDGM PRLYAQITKV SAPGSCLSVT WLEPDPDDKE ELQSYEKDLP VSVGWFKLGK SEDIKDHRRF
201: SHLVHCNEGS SSAGRRFSVY PREGETWAIF KGRYKHSWSY RDIDWSADPD SHRKYNYAFV EIVPEEDAHI SADAPVGFLH KAKGFTSVFC RFAKEVAKSY
301: IRSGYTEQFS HRVPSFKMTG VEAEGVPPRG AYELDPAALP ENIKEIDVPL HLLEEPTVSN SEEDNTHSQC VYFASKGITF QTGQVWSFCS GDDNFPRFYG
401: KIQKITFVQA FEQDPVVKLN IGRLKARPIK GVIQWIDKEM PIGCGNFRAR KVLEIFTDLD LFSRLVSQDS SGDGDDYSIM PKAGDVWAIY RNWSDGIKVA
501: DLQSQSYDLV EVLDDKMDYK VLLLAPDGGF ESVDSKGCGS VYVAAAEHWM DGEDVRFTIP KCELLRFSHQ VPTSKVTKEM HGSFARSL
Best Arabidopsis Sequence Match ( AT5G18720.1 )
(BLAST)
001: MSMNLSRFCQ ITLMKLVYML HTCIKQKDLL VCSFEWEEVM KVYFVFYLRV CIGSPIGFLP LTGIEGKGVP KDAYELDKAA LPETIEEFIV PLDSESNIKS
101: KRQDIYFASK GNVFLTGQIW SFYCGDDSLP LYYGRIQKIT FTQAFMQDPV CKLHIGRLKA TRFPADVIDW ENKGTPVGCG TFYARKALEI ITPSEVSLQI
201: TPQTSIDGIE YTILPKIGEV WVIYKYWSRD MDAEDFSFAS YNIVEILDDT LEYKVQLLKH DPFYKDHKKE NTLLRAVKKN ESWEMEGSGS YIPTYTIPKR
301: ERIRFSNKVP ASRVTIEMYG ELVDLISVDS RALPSHLIAS DH
Arabidopsis Description
DNAJ heat shock amino-terminal domain protein, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:Q3E9E2]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.