Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27811 Canola nucleus 96.12 41.34
PGSC0003DMT400057888 Potato cytosol 36.41 37.88
Bra001194.1-P Field mustard cytosol 31.07 31.68
PGSC0003DMT400089411 Potato cytosol 33.5 30.8
Bra039477.1-P Field mustard plastid 69.42 26.58
Bra024236.1-P Field mustard nucleus 42.72 23.91
AT3G04960.3 Thale cress cytosol 65.53 22.31
Bra039461.1-P Field mustard cytosol 52.91 20.45
CDY41917 Canola nucleus 91.26 19.67
PGSC0003DMT400057894 Potato cytosol 32.52 17.27
Solyc10g007630.1.1 Tomato cytosol 37.86 16.05
PGSC0003DMT400054841 Potato cytosol 37.38 15.59
Bra041167.1-P Field mustard cytosol, nucleus, plastid 4.85 15.38
Bra009972.1-P Field mustard nucleus 46.6 15.26
PGSC0003DMT400057893 Potato cytosol 35.44 15.08
Bra006478.1-P Field mustard nucleus 38.35 14.85
Solyc01g098310.1.1 Tomato cytosol 32.04 14.47
Bra002183.1-P Field mustard nucleus 39.81 14.44
Bra006479.1-P Field mustard cytosol 37.38 13.95
Bra006476.1-P Field mustard nucleus 39.81 13.95
Solyc01g098330.1.1 Tomato nucleus 27.18 13.66
Os11t0574200-00 Rice cytosol 20.87 13.15
Bra020757.1-P Field mustard nucleus 38.35 12.1
Bra034258.1-P Field mustard cytosol 35.92 11.95
TraesCS2D01G078000.1 Wheat cytosol 36.41 11.66
KRG92798 Soybean cytosol 39.32 11.42
Bra017315.1-P Field mustard nucleus 25.73 11.11
Bra006473.1-P Field mustard plastid 37.38 10.95
Solyc08g029220.1.1 Tomato nucleus 41.75 10.9
PGSC0003DMT400038431 Potato nucleus 41.26 10.8
GSMUA_Achr11P... Banana nucleus 33.98 10.7
Bra007790.1-P Field mustard nucleus 30.58 10.64
TraesCS4A01G214500.1 Wheat nucleus 33.98 10.45
Bra003079.1-P Field mustard cytosol 35.92 10.44
Solyc01g098340.2.1 Tomato cytosol 40.29 10.38
GSMUA_Achr2P02410_001 Banana cytosol 38.84 10.34
Bra005331.1-P Field mustard nucleus 26.21 10.29
GSMUA_Achr5P00460_001 Banana cytosol 35.44 10.04
Bra035378.1-P Field mustard cytosol 33.01 9.88
PGSC0003DMT400057887 Potato cytosol 40.29 9.86
Bra013179.1-P Field mustard nucleus 33.01 9.81
Zm00001d052947_P001 Maize plastid 37.86 9.02
TraesCS2A01G080400.1 Wheat cytosol 34.47 8.82
HORVU2Hr1G084660.1 Barley cytosol 36.89 8.74
Solyc01g098250.2.1 Tomato nucleus 41.26 8.56
HORVU2Hr1G013270.2 Barley cytosol 35.44 8.4
EES08665 Sorghum nucleus 27.67 8.39
TraesCS2A01G347700.1 Wheat mitochondrion 37.38 8.38
TraesCS4B01G101500.1 Wheat cytosol 36.41 8.37
TraesCS2B01G366100.1 Wheat cytosol 36.89 8.27
Bra040290.1-P Field mustard cytosol, mitochondrion 7.28 8.24
TraesCS2D01G077700.1 Wheat cytosol 34.47 8.23
TraesCS2B01G095100.1 Wheat cytosol 33.98 8.1
EER88793 Sorghum cytosol 36.89 8.02
Zm00001d040846_P001 Maize cytosol 35.92 7.91
Os06t0535300-01 Rice nucleus 38.84 7.86
Os11t0573800-00 Rice nucleus 34.95 7.84
TraesCS2A01G084900.1 Wheat nucleus 39.32 7.83
TraesCS6B01G194500.1 Wheat cytosol 36.89 7.79
Os01t0375100-01 Rice nucleus 37.86 7.74
HORVU7Hr1G050080.1 Barley nucleus 38.84 7.74
HORVU4Hr1G043860.4 Barley cytosol 35.44 7.69
HORVU6Hr1G033850.1 Barley cytosol 36.41 7.69
TraesCS6A01G167100.1 Wheat cytosol 36.41 7.68
PGSC0003DMT400057904 Potato nucleus 40.29 7.68
TraesCS6D01G155600.1 Wheat cytosol 35.92 7.58
EES00793 Sorghum cytosol 35.92 7.57
KRG96896 Soybean cytosol 38.84 7.56
KXG32106 Sorghum cytosol 36.89 7.52
Os11t0578100-00 Rice cytosol 38.35 7.5
KRH68628 Soybean cytosol 38.84 7.5
KXG28768 Sorghum nucleus 35.44 7.49
TraesCS2B01G099600.2 Wheat nucleus 38.84 7.29
TraesCS2D01G082800.1 Wheat nucleus 38.84 7.28
TraesCS3A01G213800.3 Wheat nucleus 35.92 7.23
TraesCS3D01G215900.1 Wheat nucleus 35.92 7.23
Zm00001d008413_P001 Maize cytosol 35.44 7.17
Zm00001d008412_P001 Maize cytosol 35.44 7.16
EES09993 Sorghum nucleus 38.35 7.16
Bra002182.1-P Field mustard nucleus 37.38 7.1
OQU83710 Sorghum cytosol 33.5 7.08
TraesCS3B01G244000.4 Wheat nucleus 35.44 7.06
OQU83714 Sorghum cytosol, nucleus, plastid 33.01 6.44
EER98396 Sorghum nucleus 35.44 6.4
OQU83709 Sorghum cytosol 35.92 6.37
HORVU3Hr1G051850.2 Barley nucleus 33.98 6.19
Zm00001d019461_P002 Maize cytosol 33.5 6.18
TraesCS1B01G054900.1 Wheat nucleus 34.95 6.04
TraesCS1D01G042900.1 Wheat nucleus 34.95 6.04
HORVU1Hr1G008940.2 Barley nucleus 34.95 6.01
TraesCS1A01G042500.1 Wheat nucleus 34.47 5.97
Bra001216.1-P Field mustard cytosol 6.31 5.75
Bra006477.1-P Field mustard cytosol 37.38 5.6
Bra039474.1-P Field mustard nucleus 41.26 5.57
TraesCS2D01G077900.1 Wheat cytosol 12.62 4.81
Bra040300.1-P Field mustard cytosol 4.37 2.44
Bra013403.1-P Field mustard nucleus 5.83 2.21
Bra038959.1-P Field mustard nucleus 1.94 1.04
Bra020956.1-P Field mustard nucleus 1.46 0.86
Bra020957.1-P Field mustard cytosol 0.49 0.49
KRH34003 Soybean cytosol 0.49 0.34
Bra002184.1-P Field mustard cytosol 0.0 0.0
Bra013404.1-P Field mustard nucleus 0.0 0.0
Bra020955.1-P Field mustard cytosol 0.0 0.0
Bra020958.1-P Field mustard cytosol 0.0 0.0
Bra031906.1-P Field mustard cytosol 0.0 0.0
KRH34004 Soybean cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Bra039476.1EnsemblPlants:Bra039476.1-PEnsemblPlantsGene:Bra039476GO:GO:0003674GO:GO:0003824GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008237GO:GO:0016787GO:GO:0019538InterPro:DUF3444
PANTHER:PTHR10825PANTHER:PTHR10825:SF4PFAM:PF11926SEG:segUniParc:UPI00025474A4UniProt:M4FEF5
MapMan:35.2:::::
Description
AT3G04960 (E=1e-063) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27980.1); Has 17810 Blast hits to 12112 proteins in 728 species: Archae - 198; Bacteria - 1231; Metazoa - 8565; Fungi - 1136; Plants - 665; Viruses - 38; Other Eukaryotes - 5977 (source: NCBI BLink).
Coordinates
chrA05:-:23505542..23506162
Molecular Weight (calculated)
23550.5 Da
IEP (calculated)
8.938
GRAVY (calculated)
-0.413
Length
206 amino acids
Sequence
(BLAST)
001: MSSFSVGQIW ALYDPLDHMP RLYAKIKKVL ELEMKVEVTW LESKQKSHIP ISCGEFKYGE RTVKSYLTFS HLMDHIGGTG KKKKSIITIN PRKGETWALF
101: RDWKKQQKRP YSYDFVQVVS ELDSGGIGVA YLGRVEGFTS VYKLVEQNGV LQMMVTCDEM LRFSHRVPSF KLTGDEKKGV PAGSFELDPA AIPRDYLEAS
201: EVKQEE
Best Arabidopsis Sequence Match ( AT3G04960.4 )
(BLAST)
001: MLSTERTKFR SMEPATSSPL PRDTSEQDPA LAQSEDQSQG RFGFLKQRAM EKEVSVRNQI LELEKKEERL RLVEERERKI EASFSTLQEK GNESDLILLM
101: EANVMRLVLQ MQFEQVVVAQ LNAQENFLGS LHDSMMKKHE ELMTELEARK NEVALISKTI DAKTCDLDMK VKDFDLKQTT ESERMRKETE LMETSLKQLE
201: ARENELRLLN ETIQGKSMEL EKKEVNFQLK HEAAARETEV KNKFLELKEK KLEEREQHLE LKQRKKEKPA IRAETRKRSR LEYESPLSAE KGRYAETLIR
301: PGKKQVQKRE AHEIIYIDED EPFNCPDPDF HDFNNTMSSF AVGQVWALYD PVDDMPRYYA EIRKVLQPQL SLRVTWLESL QTTEEPIPAC GRFEHGKSET
401: SSHLMFSHEM YHTIRGQYVT INPRKGETWA LFGDWTKTWK SHSEQQKTPY SYDFVEVVTE FDSDRGIGVA YLGRVEGFTS VYERAAQNGL VEIMISCDEM
501: LRFSHRVPSF KMTGDEKEGV PAGSFELDPA AVPRVYLKDA KVKEEKMEPI VLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.