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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88917 Canola nucleus 56.16 93.37
CDX70843 Canola extracellular, golgi 77.72 79.3
Bra006478.1-P Field mustard nucleus 75.0 77.82
Bra002183.1-P Field mustard nucleus 51.63 50.18
PGSC0003DMT400057888 Potato cytosol 16.67 46.46
Bra006473.1-P Field mustard plastid 56.88 44.67
PGSC0003DMT400089411 Potato cytosol 16.12 39.73
Bra006476.1-P Field mustard nucleus 41.85 39.29
Bra001194.1-P Field mustard cytosol 14.31 39.11
Bra039476.1-P Field mustard cytosol 13.95 37.38
CDX70844 Canola mitochondrion, plasma membrane 57.25 37.0
Bra002184.1-P Field mustard cytosol 13.22 27.86
PGSC0003DMT400057894 Potato cytosol 17.21 24.48
Bra006477.1-P Field mustard cytosol 56.52 22.69
PGSC0003DMT400057893 Potato cytosol 19.57 22.31
Bra002182.1-P Field mustard nucleus 42.75 21.75
Os11t0574200-00 Rice cytosol 12.86 21.71
GSMUA_Achr5P00460_001 Banana cytosol 27.9 21.18
GSMUA_Achr11P... Banana nucleus 25.0 21.1
Solyc10g007630.1.1 Tomato cytosol 18.48 20.99
Solyc01g098340.2.1 Tomato cytosol 30.07 20.75
Solyc01g098310.1.1 Tomato cytosol 17.03 20.61
TraesCS4A01G214500.1 Wheat nucleus 25.0 20.6
PGSC0003DMT400054841 Potato cytosol 17.93 20.04
Solyc01g098330.1.1 Tomato nucleus 14.86 20.0
PGSC0003DMT400057887 Potato cytosol 30.43 19.95
GSMUA_Achr2P02410_001 Banana cytosol 27.72 19.77
Bra024236.1-P Field mustard nucleus 13.04 19.57
Solyc01g098250.2.1 Tomato nucleus 31.34 17.42
KRG92798 Soybean cytosol 22.1 17.21
Zm00001d040846_P001 Maize cytosol 29.17 17.2
Bra009972.1-P Field mustard nucleus 19.57 17.17
HORVU2Hr1G084660.1 Barley cytosol 26.63 16.9
HORVU2Hr1G013270.2 Barley cytosol 26.45 16.8
EER88793 Sorghum cytosol 28.8 16.77
TraesCS2B01G095100.1 Wheat cytosol 26.09 16.67
TraesCS4B01G101500.1 Wheat cytosol 26.99 16.63
Bra039477.1-P Field mustard plastid 16.12 16.54
TraesCS2D01G077700.1 Wheat cytosol 25.72 16.45
Zm00001d052947_P001 Maize plastid 25.72 16.42
Bra020757.1-P Field mustard nucleus 19.38 16.39
EES00793 Sorghum cytosol 28.99 16.38
PGSC0003DMT400057904 Potato nucleus 31.88 16.28
Os01t0375100-01 Rice nucleus 29.71 16.27
TraesCS2A01G347700.1 Wheat mitochondrion 26.63 16.0
TraesCS2B01G366100.1 Wheat cytosol 26.63 16.0
TraesCS3A01G213800.3 Wheat nucleus 29.35 15.84
TraesCS3D01G215900.1 Wheat nucleus 29.35 15.82
Os06t0535300-01 Rice nucleus 28.99 15.72
KRH68628 Soybean cytosol 30.25 15.65
HORVU6Hr1G033850.1 Barley cytosol 27.54 15.59
TraesCS6A01G167100.1 Wheat cytosol 27.54 15.57
TraesCS6B01G194500.1 Wheat cytosol 27.54 15.57
TraesCS3B01G244000.4 Wheat nucleus 29.17 15.57
KRG96896 Soybean cytosol 29.71 15.5
KXG32106 Sorghum cytosol 28.26 15.43
Bra039461.1-P Field mustard cytosol 14.86 15.38
Bra041167.1-P Field mustard cytosol, nucleus, plastid 1.81 15.38
TraesCS6D01G155600.1 Wheat cytosol 27.17 15.37
Zm00001d008412_P001 Maize cytosol 28.26 15.31
Os11t0578100-00 Rice cytosol 28.99 15.19
HORVU4Hr1G043860.4 Barley cytosol 26.09 15.17
TraesCS2A01G084900.1 Wheat nucleus 28.08 14.99
OQU83710 Sorghum cytosol 26.45 14.99
KXG28768 Sorghum nucleus 26.45 14.97
PGSC0003DMT400038431 Potato nucleus 21.2 14.87
Zm00001d008413_P001 Maize cytosol 27.36 14.83
Solyc08g029220.1.1 Tomato nucleus 21.2 14.83
EER98396 Sorghum nucleus 30.43 14.72
Bra034258.1-P Field mustard cytosol 16.49 14.7
Zm00001d019461_P002 Maize cytosol 29.17 14.43
HORVU7Hr1G050080.1 Barley nucleus 26.99 14.41
TraesCS2A01G080400.1 Wheat cytosol 20.83 14.29
TraesCS2D01G082800.1 Wheat nucleus 28.26 14.19
HORVU3Hr1G051850.2 Barley nucleus 28.99 14.15
TraesCS2B01G099600.2 Wheat nucleus 28.08 14.13
Bra017315.1-P Field mustard nucleus 12.14 14.05
TraesCS1D01G042900.1 Wheat nucleus 30.25 14.01
EES09993 Sorghum nucleus 27.72 13.87
TraesCS1B01G054900.1 Wheat nucleus 29.71 13.76
HORVU1Hr1G008940.2 Barley nucleus 29.71 13.69
TraesCS2D01G078000.1 Wheat cytosol 15.94 13.69
TraesCS1A01G042500.1 Wheat nucleus 28.99 13.45
Bra007790.1-P Field mustard nucleus 14.31 13.34
EES08665 Sorghum nucleus 16.3 13.25
Bra005331.1-P Field mustard nucleus 12.32 12.95
OQU83709 Sorghum cytosol 27.17 12.91
Bra003079.1-P Field mustard cytosol 16.49 12.84
OQU83714 Sorghum cytosol, nucleus, plastid 24.09 12.59
Bra035378.1-P Field mustard cytosol 15.22 12.21
Bra013179.1-P Field mustard nucleus 15.22 12.12
Bra031906.1-P Field mustard cytosol 1.81 10.87
Os11t0573800-00 Rice nucleus 17.57 10.57
Bra040290.1-P Field mustard cytosol, mitochondrion 3.44 10.44
Bra039474.1-P Field mustard nucleus 24.46 8.85
Bra001216.1-P Field mustard cytosol 3.08 7.52
TraesCS2D01G077900.1 Wheat cytosol 7.07 7.22
Bra040300.1-P Field mustard cytosol 4.35 6.5
Bra020957.1-P Field mustard cytosol 2.36 6.31
Bra020958.1-P Field mustard cytosol 1.09 5.88
Bra020956.1-P Field mustard nucleus 3.44 5.44
Bra038959.1-P Field mustard nucleus 3.62 5.19
Bra013403.1-P Field mustard nucleus 4.71 4.8
KRH34004 Soybean cytosol 2.54 4.4
KRH34003 Soybean cytosol 1.99 3.78
Bra013404.1-P Field mustard nucleus 1.81 2.24
Bra020955.1-P Field mustard cytosol 1.09 2.13
Protein Annotations
EnsemblPlants:Bra006479.1EnsemblPlants:Bra006479.1-PEnsemblPlantsGene:Bra006479InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926
SEG:segUniParc:UPI000253FED2UniProt:M4CQJ0MapMan:35.2::
Description
AT5G18730 (E=1e-109) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA03:+:3692189..3693847
Molecular Weight (calculated)
62450.1 Da
IEP (calculated)
5.945
GRAVY (calculated)
-0.440
Length
552 amino acids
Sequence
(BLAST)
001: MDITSKRKAV AETLMKGTGT AAFYSASDEA VHSPRLSCAV SVGDKRKRNE LGGSNDDGAG LKFNDFEKLR KEVNFLAAQT WAMYDNVDGM PRLYARIRKV
101: AAPSFELRIT NLEPDPDDER EILWFEQDLP VSAGQFRLGK NEDMKDISIF SHVIHCKEGG NTGHITVSPR KGETWALFKN WDINWSSEPD SHRRYEYDIV
201: EILSDHADGT GVSVTFLHKA KGFASVFFRM GTGVADMFRM PTGDADTFRM ETGDADTSQI PPQDIYQFSH MIPSFKMTGF EAKGLPKDAY ELDQAALPEK
301: VEEKDVPSHL IPRPKPEALC FPSKHTGKVF QTGQFWAFGG DYDFTPRFYG RIQKIILTQA FDEAAELKIH VSRLKATSFP ENVIKWKDKR MPVGCGTFSV
401: PKSCSIFYPQ HLTHQIFPQT SMDGNEFTIL PKIGQVWMIY RDWVPHYDLV ALEEHDLDFE VVEVLDDALN YKVLALERAL GTSEEKNYLF RAAKSRPSYC
501: HDEDGPGVIF TIPQSKMLRF SHPLPVSRVT KEVDGEMEVL FEVDKKALPH GA
Best Arabidopsis Sequence Match ( AT5G18730.1 )
(BLAST)
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.