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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13918 Canola nucleus 87.85 87.09
Bra006478.1-P Field mustard nucleus 50.18 53.57
Bra006479.1-P Field mustard cytosol 50.18 51.63
AT5G18740.1 Thale cress nucleus 37.85 50.0
PGSC0003DMT400057888 Potato cytosol 16.2 46.46
Bra006476.1-P Field mustard nucleus 43.31 41.84
Bra006473.1-P Field mustard plastid 51.58 41.68
Bra001194.1-P Field mustard cytosol 14.44 40.59
PGSC0003DMT400089411 Potato cytosol 15.85 40.18
Bra039476.1-P Field mustard cytosol 14.44 39.81
Bra002184.1-P Field mustard cytosol 15.14 32.82
PGSC0003DMT400057894 Potato cytosol 16.55 24.23
Bra002182.1-P Field mustard nucleus 44.19 23.13
GSMUA_Achr11P... Banana nucleus 26.41 22.94
PGSC0003DMT400057893 Potato cytosol 19.54 22.93
TraesCS4A01G214500.1 Wheat nucleus 26.76 22.69
Os11t0574200-00 Rice cytosol 12.85 22.32
Bra006477.1-P Field mustard cytosol 53.87 22.25
Solyc10g007630.1.1 Tomato cytosol 19.01 22.22
Solyc01g098340.2.1 Tomato cytosol 30.81 21.88
PGSC0003DMT400054841 Potato cytosol 18.84 21.66
GSMUA_Achr5P00460_001 Banana cytosol 27.29 21.32
Bra024236.1-P Field mustard nucleus 13.73 21.2
GSMUA_Achr2P02410_001 Banana cytosol 28.7 21.06
PGSC0003DMT400057887 Potato cytosol 30.81 20.78
Bra041167.1-P Field mustard cytosol, nucleus, plastid 2.29 20.0
Solyc01g098310.1.1 Tomato cytosol 15.67 19.52
Solyc01g098330.1.1 Tomato nucleus 13.91 19.27
Zm00001d040846_P001 Maize cytosol 30.81 18.7
TraesCS4B01G101500.1 Wheat cytosol 29.23 18.53
Solyc01g098250.2.1 Tomato nucleus 31.51 18.03
Bra020757.1-P Field mustard nucleus 20.6 17.92
Bra039477.1-P Field mustard plastid 16.9 17.84
HORVU2Hr1G084660.1 Barley cytosol 27.29 17.82
EES00793 Sorghum cytosol 30.63 17.81
EER88793 Sorghum cytosol 29.58 17.72
Os01t0375100-01 Rice nucleus 31.34 17.66
HORVU2Hr1G013270.2 Barley cytosol 26.76 17.49
Bra009972.1-P Field mustard nucleus 19.19 17.33
PGSC0003DMT400057904 Potato nucleus 32.75 17.21
TraesCS6A01G167100.1 Wheat cytosol 29.4 17.11
TraesCS6B01G194500.1 Wheat cytosol 29.4 17.11
KRG92798 Soybean cytosol 21.3 17.07
TraesCS2B01G366100.1 Wheat cytosol 27.46 16.98
HORVU6Hr1G033850.1 Barley cytosol 29.05 16.92
TraesCS2D01G077700.1 Wheat cytosol 25.7 16.92
KXG32106 Sorghum cytosol 30.11 16.91
Zm00001d052947_P001 Maize plastid 25.7 16.88
TraesCS2A01G347700.1 Wheat mitochondrion 27.29 16.87
TraesCS3A01G213800.3 Wheat nucleus 30.28 16.81
TraesCS6D01G155600.1 Wheat cytosol 28.87 16.8
TraesCS2B01G095100.1 Wheat cytosol 25.53 16.78
HORVU4Hr1G043860.4 Barley cytosol 27.99 16.75
KRG96896 Soybean cytosol 31.16 16.73
TraesCS3D01G215900.1 Wheat nucleus 30.11 16.7
Bra039461.1-P Field mustard cytosol 15.67 16.7
Zm00001d008412_P001 Maize cytosol 29.93 16.68
Os11t0578100-00 Rice cytosol 30.63 16.52
KRH68628 Soybean cytosol 30.99 16.49
TraesCS3B01G244000.4 Wheat nucleus 29.93 16.44
Os06t0535300-01 Rice nucleus 29.4 16.4
Zm00001d008413_P001 Maize cytosol 29.23 16.31
PGSC0003DMT400038431 Potato nucleus 22.54 16.26
OQU83710 Sorghum cytosol 27.82 16.22
KXG28768 Sorghum nucleus 27.82 16.21
TraesCS2A01G084900.1 Wheat nucleus 29.23 16.05
Solyc08g029220.1.1 Tomato nucleus 22.01 15.84
HORVU7Hr1G050080.1 Barley nucleus 28.52 15.67
Bra034258.1-P Field mustard cytosol 16.73 15.35
HORVU3Hr1G051850.2 Barley nucleus 30.28 15.21
TraesCS2B01G099600.2 Wheat nucleus 29.23 15.13
TraesCS2D01G082800.1 Wheat nucleus 29.23 15.1
EER98396 Sorghum nucleus 30.28 15.07
Zm00001d019461_P002 Maize cytosol 29.58 15.05
Bra017315.1-P Field mustard nucleus 12.32 14.68
TraesCS2A01G080400.1 Wheat cytosol 20.6 14.53
TraesCS2D01G078000.1 Wheat cytosol 16.37 14.46
EES09993 Sorghum nucleus 27.99 14.42
Bra007790.1-P Field mustard nucleus 14.96 14.36
OQU83714 Sorghum cytosol, nucleus, plastid 26.06 14.02
OQU83709 Sorghum cytosol 28.35 13.86
Bra003079.1-P Field mustard cytosol 17.25 13.82
Bra040290.1-P Field mustard cytosol, mitochondrion 4.4 13.74
Bra005331.1-P Field mustard nucleus 12.68 13.71
Bra013179.1-P Field mustard nucleus 16.37 13.42
EES08665 Sorghum nucleus 16.02 13.4
TraesCS1D01G042900.1 Wheat nucleus 27.99 13.34
TraesCS1B01G054900.1 Wheat nucleus 27.82 13.26
Bra035378.1-P Field mustard cytosol 16.02 13.23
HORVU1Hr1G008940.2 Barley nucleus 27.64 13.11
TraesCS1A01G042500.1 Wheat nucleus 27.11 12.94
Bra001216.1-P Field mustard cytosol 4.4 11.06
Os11t0573800-00 Rice nucleus 17.25 10.68
Bra039474.1-P Field mustard nucleus 26.94 10.03
TraesCS2D01G077900.1 Wheat cytosol 7.39 7.78
Bra031906.1-P Field mustard cytosol 1.23 7.61
Bra020958.1-P Field mustard cytosol 1.23 6.86
Bra040300.1-P Field mustard cytosol 4.05 6.23
Bra013403.1-P Field mustard nucleus 5.11 5.35
KRH34004 Soybean cytosol 2.82 5.03
Bra038959.1-P Field mustard nucleus 3.35 4.94
Bra020957.1-P Field mustard cytosol 1.58 4.37
Bra020956.1-P Field mustard nucleus 2.64 4.3
KRH34003 Soybean cytosol 2.11 4.12
Bra020955.1-P Field mustard cytosol 1.94 3.9
Bra013404.1-P Field mustard nucleus 2.29 2.91
Protein Annotations
EnsemblPlants:Bra002183.1EnsemblPlants:Bra002183.1-PEnsemblPlantsGene:Bra002183InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926
UniParc:UPI000254536EUniProt:M4CDA2MapMan:35.2:::
Description
AT5G18730 (E=3e-154) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA10:-:11042288..11043994
Molecular Weight (calculated)
65093.6 Da
IEP (calculated)
5.632
GRAVY (calculated)
-0.522
Length
568 amino acids
Sequence
(BLAST)
001: MDITVNELSR KGIAAQNHHS RSDSVASIPK IHQEKTQAFS NLSCSAVKVG EKRQRDEFAA ELCNADEQNK RRRSDANIDA ETGEELVQPE ISECSHPKFN
101: VFEKLRAEAT FAVGQTWALY DPADGMPRLY AQIRKVSSPS FGLRITYLEP DPDDEKHIQW CEQDLPVSTG KFRLGKNENT KDISKFSHLI QSHEGSNTGR
201: HFTISPRKGE TWALFKNWDI NWSSEPDSHR SHEYEFVEIL SDYTDEAGVF VSYLHKAKGF ASVFFRIGTG PADIFRIYNL YRFSHMVPSF RLTGTEAKGV
301: PKEAYELDQA ALPKTIQEVM VPSESNSKPK RQEIYFATKG KVFQTGQIWS FCSGYDDLPL YYGKIQKITF TQAFKQEPVF KLHIGRLKAT TPFPKDVVEW
401: RDRGMPVGCG TFYARKALEI ITPSQVSHQV IPQVSLDGNE YTILPKIGEV WAIYRYWSVH IDVEDLEFGL YDIVEVLDDS LEDYKVQMLV QESYLDDDEN
501: YNRYFKGATE YVDNEVEGSE PIFTIPKSER IRFSNKVHAL RVTKEINGEL NDLFCMEFNA VPINIVLH
Best Arabidopsis Sequence Match ( AT5G18730.1 )
(BLAST)
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.