Factsheet for Bra013404.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78942	Canola	cytosol	68.39	99.67
Bra020958.1-P	Field mustard	cytosol	15.92	69.61
Bra031906.1-P	Field mustard	cytosol	12.11	58.7
Bra020957.1-P	Field mustard	cytosol	24.66	53.4
PGSC0003DMT400039473	Potato	nucleus	17.49	52.7
Solyc03g019630.1.1	Tomato	nucleus	16.82	48.08
KRG89459	Soybean	cytosol	10.09	41.28
Bra020955.1-P	Field mustard	cytosol	24.89	39.36
Bra020956.1-P	Field mustard	nucleus	28.25	36.1
Bra040300.1-P	Field mustard	cytosol	22.65	27.37
Bra038959.1-P	Field mustard	nucleus	23.32	27.01
Bra013403.1-P	Field mustard	nucleus	32.06	26.38
Bra003079.1-P	Field mustard	cytosol	33.41	21.02
GSMUA_Achr8P00660_001	Banana	cytosol	23.32	17.28
GSMUA_Achr10P...	Banana	cytosol	23.54	17.13
Bra001216.1-P	Field mustard	cytosol	8.52	16.81
TraesCS3D01G541800.1	Wheat	cytosol	26.68	15.95
TraesCS3A01G536400.1	Wheat	cytosol	26.23	15.77
TraesCS3B01G607500.1	Wheat	cytosol	26.23	15.77
TraesCS4B01G319100.1	Wheat	cytosol	24.89	15.59
GSMUA_Achr11P...	Banana	cytosol	17.04	15.14
EES07899	Sorghum	cytosol	24.89	15.1
Bra034258.1-P	Field mustard	cytosol	20.85	15.02
TraesCS5A01G493100.1	Wheat	cytosol	25.34	14.85
TraesCS4D01G315600.1	Wheat	cytosol	25.34	14.85
GSMUA_Achr6P12230_001	Banana	nucleus	19.06	14.66
Zm00001d025584_P001	Maize	cytosol	23.99	14.6
Os03t0401200-01	Rice	cytosol	24.44	14.57
Zm00001d025585_P001	Maize	cytosol	23.77	14.46
Bra007790.1-P	Field mustard	nucleus	19.06	14.36
GSMUA_Achr2P21160_001	Banana	cytosol	17.04	14.13
EES10933	Sorghum	cytosol	22.87	14.09
Bra020757.1-P	Field mustard	nucleus	20.18	13.78
Bra040290.1-P	Field mustard	cytosol, mitochondrion	5.61	13.74
Bra035378.1-P	Field mustard	cytosol	20.63	13.37
TraesCS2B01G301100.1	Wheat	cytosol	21.08	13.31
Os01t0923800-01	Rice	nucleus	21.75	13.04
Bra009972.1-P	Field mustard	nucleus	18.39	13.04
TraesCS2D01G283100.2	Wheat	cytosol	21.3	12.96
TraesCS2A01G284200.2	Wheat	cytosol	21.3	12.96
TraesCS3B01G470100.1	Wheat	nucleus	21.08	12.95
Os02t0510000-01	Rice	cytosol	21.3	12.94
EES10633	Sorghum	cytosol	21.08	12.79
Bra013179.1-P	Field mustard	nucleus	19.73	12.7
Zm00001d025238_P001	Maize	cytosol	20.85	12.67
Zm00001d003948_P001	Maize	cytosol	20.4	12.36
OQU85000	Sorghum	cytosol	20.18	12.36
TraesCS3A01G435100.1	Wheat	nucleus	21.75	12.26
GSMUA_Achr3P02570_001	Banana	nucleus	14.35	12.24
Bra017315.1-P	Field mustard	nucleus	12.56	11.74
KXG34016	Sorghum	nucleus	21.3	11.46
Zm00001d011997_P001	Maize	nucleus	20.63	11.19
Bra005331.1-P	Field mustard	nucleus	11.66	9.9
Zm00001d050565_P001	Maize	cytosol	13.68	9.47
Bra039461.1-P	Field mustard	cytosol	7.4	6.19
Bra039477.1-P	Field mustard	plastid	5.61	4.65
Os04t0388800-01	Rice	nucleus	5.61	4.18
Bra006473.1-P	Field mustard	plastid	4.04	2.56
Bra002183.1-P	Field mustard	nucleus	2.91	2.29
Bra039474.1-P	Field mustard	nucleus	6.73	1.97
Bra006476.1-P	Field mustard	nucleus	2.47	1.87
Bra006479.1-P	Field mustard	cytosol	2.24	1.81
Bra024236.1-P	Field mustard	nucleus	1.35	1.63
Bra006478.1-P	Field mustard	nucleus	1.79	1.5
Bra006477.1-P	Field mustard	cytosol	4.48	1.45
Bra002182.1-P	Field mustard	nucleus	2.47	1.01
Bra001194.1-P	Field mustard	cytosol	0.0	0.0
Bra002184.1-P	Field mustard	cytosol	0.0	0.0
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	0.0	0.0
Bra039476.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra013404.1	EnsemblPlants:Bra013404.1-P	EnsemblPlantsGene:Bra013404	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002546643	UniProt:M4DA94
MapMan:35.2	:	:	:	:	:

Description

AT4G19590 (E=1e-053) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA01:+:5461583..5463436

Molecular Weight (calculated)

51127.6 Da

IEP (calculated)

10.345

GRAVY (calculated)

-1.522

Length

446 amino acids

Sequence
(BLAST)

001: MECNKDEAIR AMDIAKRKVT ETDYTGAKTF AVKAQNLYPQ LDGLKQVLML IDVYISAGNK INGGEPDWYG VLGVDPLADD GVVKKQYRKL ALLLHPDKNK
101: CEGAEGAFKL ILEAWSLLSD KVKRIAFDQK RRVVLVKEVK PRKGRKQKQE PKEPKQATKR QKQPAKEPKQ PAKKQKQPPK EPKQPKQPAK QQKQPAKQQE
201: QPTNQHEQPP KEQQQAPKET KQEANEQQQP PKQPKQEANG QQEPPKEPKQ EANEQQQPPK QPKQEANEEH QPPKQQPKQE ANEQQQPPMQ PKQEANEQQQ
301: PPKQPKQEAN EKHQPPKQPK QRPNQQKQQP SPQKQQPRQP SSKPSRNGRG RSNTPTSKVS TFWTMCNICE TQHEYIRVFF VNKHVKCRSC LGSFKATEIE
401: KSQQATEERV VVEESEEAAR GIANSDFKVE ERARKKLKTD GSCRVK

Best Arabidopsis Sequence Match ( AT4G19590.2 )
(BLAST)

001: MECNKEEAIR AMDIAKRKVA ENDYNGAKLF ANKAQDLYPK LDGLRQVMML IDVYISAGNT ISGGESDWYG ILGVDPLADE EVVKKQYKRL ALLLHPDKNN
101: CEGAEGAFKL VLAAWCLLSD KVKRIAYDQK RKLNEVKPKR SRKQKQPPKK PPNQPKQQPN QQKQPPDQQK QPPNQPRQPP NQQKQPQNEP KQPPNQPKQP
201: PNQASTNGRA RSKKPTSKVS IFWTMCNKCE TQYEYVRVYY LNKTVLCRNC RGNFKATEIE KTPTEKEKTP TEKEETPQAT NKNTNGASSS CDRDSSLNVN
301: FDSSFRRDSS LSRMSYFNSG NVANQAEERG KREVRESEEE AGRGIANSDL KVEERVFKKL RTDNYAESSS EIKV

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT4G19590]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.