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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • endoplasmic reticulum 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES10933 Sorghum cytosol 72.65 73.76
Os03t0401200-01 Rice cytosol 72.79 71.52
TraesCS4D01G315600.1 Wheat cytosol 69.25 66.89
HORVU4Hr1G083260.1 Barley cytosol 69.39 66.84
TraesCS5A01G493100.1 Wheat cytosol 68.98 66.62
TraesCS3A01G536400.1 Wheat cytosol 66.67 66.04
TraesCS3D01G541800.1 Wheat cytosol 66.67 65.68
TraesCS3B01G607500.1 Wheat cytosol 66.12 65.5
HORVU3Hr1G117190.1 Barley cytosol 65.31 62.99
TraesCS4B01G319100.1 Wheat cytosol 59.86 61.8
Bra020958.1-P Field mustard cytosol 7.07 50.98
CDX76476 Canola cytosol 7.07 50.98
VIT_01s0010g03770.t01 Wine grape cytosol 16.6 50.41
VIT_17s0000g01140.t01 Wine grape cytosol 16.87 49.21
PGSC0003DMT400039473 Potato nucleus 9.25 45.95
KRH64496 Soybean nucleus 42.31 44.94
Solyc03g019630.1.1 Tomato nucleus 9.52 44.87
CDY60891 Canola cytosol, mitochondrion, nucleus 10.61 44.83
KRH53452 Soybean cytosol 42.04 44.65
Solyc03g007280.2.1 Tomato cytosol 11.29 42.56
CDX99361 Canola cytosol 8.44 42.47
Bra031906.1-P Field mustard cytosol 5.31 42.39
CDY31307 Canola cytosol 5.31 42.39
Bra020957.1-P Field mustard cytosol 11.84 42.23
CDX76475 Canola cytosol 11.7 41.75
VIT_01s0010g03760.t01 Wine grape cytosol 46.39 41.74
KRG89459 Soybean cytosol 6.12 41.28
CDY49460 Canola nucleus 36.33 40.95
CDY19683 Canola cytosol 38.1 40.4
PGSC0003DMT400023514 Potato cytosol 39.86 39.86
KRH09248 Soybean nucleus 42.18 39.79
Bra003079.1-P Field mustard cytosol 38.37 39.77
VIT_12s0057g00710.t01 Wine grape cytosol 37.14 39.34
CDY27107 Canola nucleus 19.32 38.8
KRH16532 Soybean cytosol 40.41 38.57
VIT_16s0050g02590.t01 Wine grape cytosol 38.91 38.49
KRH38748 Soybean nucleus 42.45 38.42
KRH18160 Soybean nucleus 40.14 38.26
Bra038959.1-P Field mustard nucleus 20.0 38.18
PGSC0003DMT400059130 Potato cytosol 40.41 38.17
EES10633 Sorghum cytosol 38.1 38.1
OQU85000 Sorghum cytosol 37.69 38.05
KRH73997 Soybean nucleus 36.46 38.01
KRH14137 Soybean nucleus 36.19 37.62
CDY12382 Canola nucleus 18.64 37.43
Solyc01g044270.2.1 Tomato cytosol 39.59 37.4
CDX78942 Canola cytosol 15.24 36.6
AT5G53150.3 Thale cress cytosol 37.55 36.56
Bra034258.1-P Field mustard cytosol 30.75 36.51
CDX76994 Canola nucleus 28.71 36.25
CDY35353 Canola cytosol 30.48 35.96
CDY60893 Canola cytosol 7.76 35.85
CDY60894 Canola cytosol 7.76 35.85
CDX99362 Canola nucleus 13.88 35.79
AT5G37380.6 Thale cress nucleus 20.68 35.27
VIT_17s0000g01150.t01 Wine grape nucleus 42.31 35.1
CDX76752 Canola nucleus 29.25 34.73
CDY11521 Canola nucleus 27.48 34.12
AT2G25560.1 Thale cress cytosol 30.34 33.99
Bra007790.1-P Field mustard nucleus 27.35 33.95
CDX99360 Canola cytosol 15.24 33.63
CDX76474 Canola cytosol 10.75 32.92
PGSC0003DMT400039476 Potato nucleus 35.92 32.8
Bra013179.1-P Field mustard nucleus 30.61 32.47
CDX93081 Canola nucleus 30.61 32.47
CDY60890 Canola cytosol 10.61 32.23
OQU79981 Sorghum cytosol 13.88 32.18
CDY15046 Canola nucleus 30.2 32.17
Bra035378.1-P Field mustard cytosol 30.07 32.12
KRH54176 Soybean nucleus 34.56 32.03
CDY09330 Canola cytosol 9.8 32.0
AT5G35753.1 Thale cress cytosol 18.64 31.93
CDY47298 Canola cytosol 25.31 31.85
CDX76473 Canola cytosol 10.48 31.82
AT5G50115.1 Thale cress cytosol 20.95 31.75
AT2G05230.1 Thale cress cytosol 30.48 31.73
AT2G05250.1 Thale cress cytosol 30.48 31.73
KRH63773 Soybean nucleus 34.97 31.61
PGSC0003DMT400085016 Potato cytosol 5.58 31.54
CDX74632 Canola cytosol 25.17 31.52
PGSC0003DMT400015678 Potato nucleus 33.74 31.47
PGSC0003DMT400048481 Potato cytosol 33.47 31.42
Solyc07g047690.1.1 Tomato nucleus 33.61 31.35
Solyc05g040050.1.1 Tomato nucleus 33.2 31.16
CDY60010 Canola cytosol, mitochondrion, nucleus 9.25 30.91
KXG34016 Sorghum nucleus 34.29 30.4
PGSC0003DMT400086295 Potato mitochondrion 8.84 29.82
Solyc03g019640.1.1 Tomato nucleus 36.73 29.06
CDY12569 Canola cytosol 13.74 28.21
EES11310 Sorghum cytosol, plastid 18.78 28.05
Bra020955.1-P Field mustard cytosol 10.75 28.01
Bra040300.1-P Field mustard cytosol 13.74 27.37
Bra020956.1-P Field mustard nucleus 12.79 26.93
AT4G19580.1 Thale cress cytosol 11.02 25.96
EES08665 Sorghum nucleus 23.81 25.77
PGSC0003DMT400092668 Potato cytosol 5.17 25.68
PGSC0003DMT400092645 Potato cytosol 4.49 25.58
KXG19130 Sorghum cytosol 17.41 25.3
Bra013404.1-P Field mustard nucleus 15.1 24.89
PGSC0003DMT400094007 Potato extracellular, plasma membrane 9.39 24.21
Bra013403.1-P Field mustard nucleus 17.55 23.8
CDX78941 Canola nucleus 17.69 23.55
AT5G62780.1 Thale cress cytosol 6.39 22.71
Solyc01g057650.1.1 Tomato cytosol 4.9 21.05
AT4G19570.1 Thale cress nucleus 15.78 20.79
Solyc07g039220.1.1 Tomato cytosol 9.66 20.11
EES00793 Sorghum cytosol 26.67 20.06
EER88793 Sorghum cytosol 24.76 19.2
KXG32106 Sorghum cytosol 26.26 19.09
KXG37199 Sorghum cytosol 6.94 18.61
Solyc01g057750.1.1 Tomato cytosol 14.56 17.26
KXG28768 Sorghum nucleus 22.72 17.13
OQU83710 Sorghum cytosol 22.59 17.04
PGSC0003DMT400080343 Potato cytosol 14.29 17.02
EER98396 Sorghum nucleus 25.85 16.65
PGSC0003DMT400096427 Potato cytosol 13.88 16.59
EES09993 Sorghum nucleus 24.35 16.23
OQU83709 Sorghum cytosol 24.08 15.23
KXG34037 Sorghum cytosol 14.83 14.23
OQU83714 Sorghum cytosol, nucleus, plastid 17.01 11.84
KXG32108 Sorghum cytosol 4.9 5.97
Bra002184.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.110MapMan:35.2EntrezGene:8067625UniProt:C5Y3J5ncoils:CoilInterPro:DUF3444
InterPro:DnaJ_domainEnsemblPlants:EES07899ProteinID:EES07899ProteinID:EES07899.1InterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfPFAM:PF00226PFAM:PF11926PRINTS:PR00625PFscan:PS50076PANTHER:PTHR44137
PANTHER:PTHR44137:SF4SMART:SM00271EnsemblPlantsGene:SORBI_3005G015900SUPFAM:SSF46565UniParc:UPI0001A860F5RefSeq:XP_002448911.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:+:1424252..1430151
Molecular Weight (calculated)
81499.5 Da
IEP (calculated)
8.482
GRAVY (calculated)
-0.666
Length
735 amino acids
Sequence
(BLAST)
001: MECNRDEAQR AKDIAKKKFE ARDLQGARKF AVKAQTLFPD LEGIAQMVAT FDIYLASEVK VAGEKDWYSI LCVATTADDE TIKKRYRKLV LQLHPDKNKE
101: VGAEGAFQMV QEAYTVLTDK TKRAVFDQKR NVRVFQQRTA QSSKASAPPA ASDGFYNFAA NAAAASKPTV NKRTAGPTAP AVRPRPPQPP PPSGPPPAPS
201: SATPAPSANP PTFWTSCNKC KMNYEYLRVY LNNHLRCPSC REPFLAKEAP IPPTASTNRN TQWGPFSRAA GAASATASSA AAAQAANVVH QTYEKVRRER
301: EEAQAAARKE EALRRKYNPL KRHASMSDVF NPGTGDVASG KKLKTMVTDA GVGSSSFIPG PGANCFRVPG VNISFSTNIG AYEFQGVNGG PNWKPRPPIY
401: ISLARATSQV DVRGLLLEKA KSGLRNKLAG NKSKTSQVAA SGKATKKHVV NESGRDNEAL TPDDRTTNKD VHVDPKEIGS NTSSDAENED DDPLSFNVPD
501: PDFHDFDKDR TEECFQIDQI WATYDDSDGM PRYYAFIQKI FSLKPFKLRI SYLESRTNSE FGPLNWVSSG FTKSCGHFRT EKYETCDIVN MFSHQMKWEK
601: GPRGVIKIYP QKGDIWAIYR NWSPDWDEDT PDNVLHAYDV VEVLDNYDED HGISVIPLAK VAGFRTIFER HQDLNGTMKI PKEEMFRFSH QVPFYRMSGE
701: EAPNVPKDSY ELDPAAISKE LLQGTTETVE ANGTS
Best Arabidopsis Sequence Match ( AT5G53150.3 )
(BLAST)
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.