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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, peroxisome, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g039220.1.1 Tomato cytosol 40.35 19.55
Solyc01g057750.1.1 Tomato cytosol 70.76 19.52
Solyc01g067780.1.1 Tomato cytosol 62.57 11.85
Solyc01g098330.1.1 Tomato nucleus 21.64 9.02
Solyc10g007630.1.1 Tomato cytosol 19.3 6.79
Solyc01g067770.1.1 Tomato extracellular, vacuole 10.53 6.59
Os04t0388800-01 Rice nucleus 21.64 6.19
Solyc01g098250.2.1 Tomato nucleus 34.5 5.94
Solyc01g098340.2.1 Tomato cytosol 27.49 5.88
GSMUA_Achr8P00660_001 Banana cytosol 20.47 5.81
Zm00001d050565_P001 Maize cytosol 21.64 5.75
TraesCS3B01G607500.1 Wheat cytosol 23.98 5.53
TraesCS3A01G536400.1 Wheat cytosol 23.98 5.53
TraesCS3D01G541800.1 Wheat cytosol 23.98 5.5
TraesCS2B01G301100.1 Wheat cytosol 22.22 5.38
TraesCS4B01G319100.1 Wheat cytosol 22.22 5.34
Os03t0401200-01 Rice cytosol 22.81 5.21
TraesCS2A01G284200.2 Wheat cytosol 22.22 5.18
Zm00001d025584_P001 Maize cytosol 22.22 5.18
Zm00001d025585_P001 Maize cytosol 22.22 5.18
TraesCS2D01G283100.2 Wheat cytosol 22.22 5.18
EES10933 Sorghum cytosol 21.64 5.11
Solyc08g029220.1.1 Tomato nucleus 23.39 5.07
Solyc01g098310.1.1 Tomato cytosol 13.45 5.04
Solyc01g044270.2.1 Tomato cytosol 22.81 5.01
TraesCS5A01G493100.1 Wheat cytosol 22.22 4.99
OQU85000 Sorghum cytosol 21.05 4.95
Zm00001d025238_P001 Maize cytosol 21.05 4.9
EES07899 Sorghum cytosol 21.05 4.9
TraesCS3B01G470100.1 Wheat nucleus 20.47 4.82
Os02t0510000-01 Rice cytosol 20.47 4.77
EES10633 Sorghum cytosol 20.47 4.76
Zm00001d003948_P001 Maize cytosol 20.47 4.76
TraesCS4D01G315600.1 Wheat cytosol 21.05 4.73
Solyc07g047690.1.1 Tomato nucleus 21.64 4.7
TraesCS3A01G435100.1 Wheat nucleus 21.05 4.55
Solyc03g019640.1.1 Tomato nucleus 23.98 4.41
Os01t0923800-01 Rice nucleus 18.71 4.3
Solyc01g057670.1.1 Tomato mitochondrion 3.51 4.29
Solyc05g040050.1.1 Tomato nucleus 19.3 4.21
Zm00001d011997_P001 Maize nucleus 19.88 4.14
Solyc08g005300.1.1 Tomato nucleus 20.47 3.84
KXG34016 Sorghum nucleus 18.13 3.74
GSMUA_Achr3P02570_001 Banana nucleus 10.53 3.44
GSMUA_Achr6P12230_001 Banana nucleus 10.53 3.1
GSMUA_Achr11P... Banana cytosol 8.77 2.99
GSMUA_Achr10P... Banana cytosol 9.94 2.77
GSMUA_Achr2P21160_001 Banana cytosol 8.19 2.6
Solyc01g065570.2.1 Tomato cytosol 3.51 2.52
CDY12382 Canola nucleus 1.75 0.82
CDY27107 Canola nucleus 1.75 0.82
Bra038959.1-P Field mustard nucleus 1.75 0.78
AT5G37380.6 Thale cress nucleus 1.75 0.7
Solyc03g019630.1.1 Tomato nucleus 0.0 0.0
Solyc03g007280.2.1 Tomato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc01g057650.1.1EnsemblPlantsGene:Solyc01g057650.1InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926UniParc:UPI0002761D1D
UniProt:K4AVX6MapMan:35.2::::
Description
No Description!
Coordinates
chr1:+:63392015..63392584
Molecular Weight (calculated)
19818.2 Da
IEP (calculated)
5.092
GRAVY (calculated)
-0.595
Length
171 amino acids
Sequence
(BLAST)
001: MQHLSHAATP NGERKKLKDY LSDEERFQNT KIEIEIVNGS VDVGLYTMTD SKSSKYPHTD FSNFDKDKDE SCFKVGHVWV VYDTFDVMPR FYEPEPLNET
101: KWLNEGFIAS CGRFRIGNVE HIDDHIMFSH LVCATNGKSN DPIKIFPLKG ETWALLKDWG SKELNYEFVE V
Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)
001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.