Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003010 | Potato | nucleus | 89.5 | 83.86 |
| CDY08035 | Canola | cytosol | 16.81 | 40.4 |
| AT3G06778.1 | Thale cress | cytosol | 35.71 | 37.12 |
| CDY34931 | Canola | cytosol | 34.87 | 36.89 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 35.29 | 36.52 |
| CDX74082 | Canola | cytosol | 34.03 | 35.84 |
| Bra001216.1-P | Field mustard | cytosol | 33.61 | 35.4 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 34.87 | 33.33 |
| KRH02299 | Soybean | cytosol | 36.13 | 32.09 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 24.37 | 31.87 |
| KRH37055 | Soybean | cytosol | 35.71 | 31.48 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 32.35 | 31.3 |
| KRH12028 | Soybean | cytosol | 35.29 | 31.11 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 31.93 | 29.69 |
| Os03t0831000-00 | Rice | plastid | 30.25 | 27.69 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 31.51 | 27.27 |
| KXG37199 | Sorghum | cytosol | 30.25 | 26.28 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 29.83 | 26.1 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 6.72 | 24.62 |
| Zm00001d034749_P001 | Maize | plastid | 28.99 | 24.56 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 21.01 | 22.94 |
| TraesCS5D01G508400.1 | Wheat | plastid | 30.25 | 20.17 |
| Solyc03g019630.1.1 | Tomato | nucleus | 12.61 | 19.23 |
| Solyc03g007280.2.1 | Tomato | cytosol | 14.29 | 17.44 |
| Solyc07g047690.1.1 | Tomato | nucleus | 21.01 | 6.35 |
| Solyc05g040050.1.1 | Tomato | nucleus | 20.59 | 6.26 |
| Solyc01g044270.2.1 | Tomato | cytosol | 20.17 | 6.17 |
| Solyc08g029220.1.1 | Tomato | nucleus | 19.75 | 5.96 |
| Solyc01g098310.1.1 | Tomato | cytosol | 11.34 | 5.92 |
| Solyc10g007630.1.1 | Tomato | cytosol | 11.34 | 5.56 |
| Solyc08g005300.1.1 | Tomato | nucleus | 21.01 | 5.48 |
| Solyc01g067780.1.1 | Tomato | cytosol | 19.75 | 5.2 |
| Solyc03g019640.1.1 | Tomato | nucleus | 19.33 | 4.95 |
| Solyc01g098250.2.1 | Tomato | nucleus | 19.75 | 4.73 |
| Solyc01g057670.1.1 | Tomato | mitochondrion | 2.1 | 3.57 |
| Solyc01g057650.1.1 | Tomato | cytosol | 2.52 | 3.51 |
| Solyc01g098330.1.1 | Tomato | nucleus | 5.46 | 3.17 |
| Solyc07g039220.1.1 | Tomato | cytosol | 3.78 | 2.55 |
| Solyc01g057750.1.1 | Tomato | cytosol | 5.88 | 2.26 |
| Solyc01g098340.2.1 | Tomato | cytosol | 7.14 | 2.12 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 2.1 | 1.83 |
Protein Annotations
| EnsemblPlants:Solyc01g065570.2.1 | EnsemblPlantsGene:Solyc01g065570.2 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR44137 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000276273B | UniProt:K4AWG1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1:+:71933119..71934592
Molecular Weight (calculated)
27639.8 Da
IEP (calculated)
9.476
GRAVY (calculated)
-0.769
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRNCGNWEL TSEICDLSKG VPSCSHRSMY TTHSEFIDWY LLLDVDESVG VDVIKQRYRK LALQLHPDKN KHPKAHIAFK LLSQAYVCLT DEASREAFET
101: DRRNHICTKC EKTLGHGNVA QVAKTFPPPD KARTVSRSIS RHVKELKARF MEEVAVIKTC SKAKSSTSTY SMNQPQTFTR RNETPIFNPS NYELQGYPHP
201: NNYRKLLHRF QERNTDKHVS SYPVFELRSE KEAYLHRF
101: DRRNHICTKC EKTLGHGNVA QVAKTFPPPD KARTVSRSIS RHVKELKARF MEEVAVIKTC SKAKSSTSTY SMNQPQTFTR RNETPIFNPS NYELQGYPHP
201: NNYRKLLHRF QERNTDKHVS SYPVFELRSE KEAYLHRF
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.