Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 39.45 | 34.54 |
| KRH02299 | Soybean | cytosol | 41.74 | 33.96 |
| KRH37055 | Soybean | cytosol | 41.28 | 33.33 |
| KRH12028 | Soybean | cytosol | 40.83 | 32.96 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 31.19 | 29.57 |
| CDY34931 | Canola | cytosol | 29.82 | 28.89 |
| Bra001216.1-P | Field mustard | cytosol | 29.82 | 28.76 |
| CDX74082 | Canola | cytosol | 29.82 | 28.76 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 8.26 | 27.69 |
| AT3G06778.1 | Thale cress | cytosol | 28.9 | 27.51 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 22.94 | 27.47 |
| Os03t0831000-00 | Rice | plastid | 30.28 | 25.38 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 28.9 | 24.61 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 26.61 | 23.58 |
| KXG37199 | Sorghum | cytosol | 27.52 | 21.9 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 27.52 | 21.82 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 27.06 | 21.69 |
| Solyc01g065570.2.1 | Tomato | cytosol | 22.94 | 21.01 |
| Zm00001d034749_P001 | Maize | plastid | 26.15 | 20.28 |
| CDY08035 | Canola | cytosol | 9.17 | 20.2 |
| PGSC0003DMT400003010 | Potato | nucleus | 22.48 | 19.29 |
| TraesCS5D01G508400.1 | Wheat | plastid | 27.06 | 16.53 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 10.55 | 9.5 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 8.26 | 7.14 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 17.43 | 6.43 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 18.81 | 5.91 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 20.18 | 5.39 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 18.35 | 5.38 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 19.72 | 5.15 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 20.18 | 4.97 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 22.02 | 4.11 |
| VIT_14s0068g01140.t01 | Wine grape | cytosol | 13.76 | 3.99 |
Protein Annotations
| ArrayExpress:VIT_05s0077g01780 | EMBL:FN595246 | EnsemblPlants:VIT_05s0077g01780.t01 | EnsemblPlantsGene:VIT_05s0077g01780 | ProteinID:CCB48015 | ProteinID:CCB48015.1 |
| UniParc:UPI0002109ABC | UniProt:F6H6V8 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:-:1407989..1409339
Molecular Weight (calculated)
25884.5 Da
IEP (calculated)
10.014
GRAVY (calculated)
-0.900
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVGEEQTD FKTQLVLEII SVSSRSIACP HQHSHKRIKS PLVDWYRLLR AYACLSDDVK RRTFDSERWR SFCRDCNRIP YTACNPSANS GSAKLKPLNP
101: TNWSRYYKVF RGLRDIRDRL KEEARVIENC FKTNAASREE FPLFNPSDYQ FQGYPHHRPL FYKKTESLWY LPGSRVTENY LRSNVTSRKE SPLFNPSDYL
201: HQGYPHYRTR SYQKPGIW
101: TNWSRYYKVF RGLRDIRDRL KEEARVIENC FKTNAASREE FPLFNPSDYQ FQGYPHHRPL FYKKTESLWY LPGSRVTENY LRSNVTSRKE SPLFNPSDYL
201: HQGYPHYRTR SYQKPGIW
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.