Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G508500.1 | Wheat | cytosol | 92.28 | 91.27 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 79.41 | 84.38 |
| TraesCS5D01G508400.1 | Wheat | plastid | 95.22 | 72.55 |
| Os03t0831000-00 | Rice | plastid | 65.07 | 68.08 |
| KXG37199 | Sorghum | cytosol | 59.93 | 59.49 |
| Zm00001d034749_P001 | Maize | plastid | 57.72 | 55.87 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 40.44 | 47.83 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 34.93 | 38.62 |
| CDY08035 | Canola | cytosol | 13.97 | 38.38 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 29.78 | 32.53 |
| CDY34931 | Canola | cytosol | 26.47 | 32.0 |
| CDX74082 | Canola | cytosol | 26.47 | 31.86 |
| KRH02299 | Soybean | cytosol | 31.25 | 31.72 |
| KRH12028 | Soybean | cytosol | 30.88 | 31.11 |
| AT3G06778.1 | Thale cress | cytosol | 26.1 | 31.0 |
| Bra001216.1-P | Field mustard | cytosol | 25.74 | 30.97 |
| KRH37055 | Soybean | cytosol | 30.51 | 30.74 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 20.22 | 30.22 |
| Solyc01g065570.2.1 | Tomato | cytosol | 26.1 | 29.83 |
| PGSC0003DMT400003010 | Potato | nucleus | 26.84 | 28.74 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 21.69 | 27.06 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 4.41 | 18.46 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 22.06 | 8.19 |
| TraesCS7A01G033400.1 | Wheat | plastid | 11.76 | 7.1 |
| TraesCS4A01G456000.1 | Wheat | plastid | 11.76 | 7.1 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 19.12 | 6.83 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 18.01 | 6.6 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 18.38 | 6.32 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 21.32 | 5.94 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 21.69 | 5.71 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 21.32 | 5.67 |
| TraesCS3A01G441600.4 | Wheat | cytosol | 13.97 | 5.05 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 21.69 | 4.96 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 8.46 | 2.86 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 8.82 | 2.61 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 5.15 | 2.09 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G365000.1 | EnsemblPlantsGene:TraesCS4A01G365000 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PFAM:PF00226 | PFscan:PS50076 | PFscan:PS51257 |
| PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:638220812..638222324
Molecular Weight (calculated)
30348.5 Da
IEP (calculated)
10.527
GRAVY (calculated)
-0.870
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAAGKAQA AREVCAASAA FSSCPHRRRS PRRAIFVDWY LVLAIGEAAS EDAIKRRYRH LALQLHPDKN RHPKAEVAFK LVSEAHACLT DKARRRNFDA
101: ERATAFCAAC HDRARAATTP CAPTRRRASD RRTPASSEAA SAQQQHNKAR GSVAKQQGGG GRRPPAPTQA LREVQNRLRD ECRVIDGCLR ANAAGARRRQ
201: SFPLFDPSDR QRFPDYPHAR PPPSFAECRP FEEEELRAGQ HHESWCTNGS CESPVYQVRT APEHATRANR PW
101: ERATAFCAAC HDRARAATTP CAPTRRRASD RRTPASSEAA SAQQQHNKAR GSVAKQQGGG GRRPPAPTQA LREVQNRLRD ECRVIDGCLR ANAAGARRRQ
201: SFPLFDPSDR QRFPDYPHAR PPPSFAECRP FEEEELRAGQ HHESWCTNGS CESPVYQVRT APEHATRANR PW
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.