Factsheet for Bra001216.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 2
cytosol 2
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74082	Canola	cytosol	98.23	98.23
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	26.11	90.77
CDY08035	Canola	cytosol	38.5	87.88
AT3G06778.1	Thale cress	cytosol	81.42	80.35
Bra040290.1-P	Field mustard	cytosol, mitochondrion	63.72	79.12
KRH02299	Soybean	cytosol	45.58	38.43
KRH50796	Soybean	cytosol, nucleus, peroxisome	41.59	37.75
KRH12028	Soybean	cytosol	42.04	35.19
KRH37055	Soybean	cytosol	41.15	34.44
GSMUA_Achr1P24750_001	Banana	cytosol	36.73	33.74
Solyc01g065570.2.1	Tomato	cytosol	35.4	33.61
GSMUA_Achr3P24140_001	Banana	nucleus	32.74	32.17
PGSC0003DMT400003010	Potato	nucleus	35.4	31.5
VIT_05s0077g01780.t01	Wine grape	nucleus	28.76	29.82
HORVU5Hr1G116070.3	Barley	cytosol	31.42	27.73
Bra020958.1-P	Field mustard	cytosol	12.39	27.45
Bra031906.1-P	Field mustard	cytosol	11.06	27.17
Os03t0831000-00	Rice	plastid	30.97	26.92
TraesCS4A01G365000.1	Wheat	cytosol	30.97	25.74
TraesCS5B01G508500.1	Wheat	cytosol	30.97	25.45
KXG37199	Sorghum	cytosol	28.32	23.36
Zm00001d034749_P001	Maize	plastid	28.76	23.13
TraesCS5D01G508400.1	Wheat	plastid	30.09	19.05
Bra020957.1-P	Field mustard	cytosol	14.16	15.53
Bra020955.1-P	Field mustard	cytosol	14.6	11.7
Bra040300.1-P	Field mustard	cytosol	17.7	10.84
Bra020956.1-P	Field mustard	nucleus	16.37	10.6
Bra038959.1-P	Field mustard	nucleus	16.81	9.87
Bra013404.1-P	Field mustard	nucleus	16.81	8.52
Bra007790.1-P	Field mustard	nucleus	22.12	8.45
Bra020757.1-P	Field mustard	nucleus	22.57	7.81
Bra034258.1-P	Field mustard	cytosol	21.24	7.75
Bra013179.1-P	Field mustard	nucleus	22.57	7.36
Bra017315.1-P	Field mustard	nucleus	15.49	7.34
Bra003079.1-P	Field mustard	cytosol	23.01	7.33
Bra009972.1-P	Field mustard	nucleus	20.35	7.31
Bra035378.1-P	Field mustard	cytosol	21.68	7.12
Bra005331.1-P	Field mustard	nucleus	15.49	6.67
Bra001194.1-P	Field mustard	cytosol	5.75	6.44
Bra039476.1-P	Field mustard	cytosol	5.75	6.31
Bra013403.1-P	Field mustard	nucleus	15.04	6.27
Bra039461.1-P	Field mustard	cytosol	14.16	6.0
Bra002183.1-P	Field mustard	nucleus	11.06	4.4
Bra024236.1-P	Field mustard	nucleus	6.64	4.08
Bra039477.1-P	Field mustard	plastid	9.29	3.9
Bra006478.1-P	Field mustard	nucleus	7.96	3.38
Bra006473.1-P	Field mustard	plastid	9.73	3.13
Bra006479.1-P	Field mustard	cytosol	7.52	3.08
Bra006476.1-P	Field mustard	nucleus	7.08	2.72
Bra039474.1-P	Field mustard	nucleus	13.27	1.97
Bra006477.1-P	Field mustard	cytosol	11.06	1.82
Bra002182.1-P	Field mustard	nucleus	6.64	1.38
Bra002184.1-P	Field mustard	cytosol	1.33	1.15

Protein Annotations

EnsemblPlants:Bra001216.1	EnsemblPlants:Bra001216.1-P	EnsemblPlantsGene:Bra001216	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00025403FA	UniProt:M4CAI7	MapMan:35.2	:

Description

AT3G06778 (E=3e-104) | heat shock protein binding / unfolded protein binding

Coordinates

chrA03:-:15382099..15383317

Molecular Weight (calculated)

26395.0 Da

IEP (calculated)

10.210

GRAVY (calculated)

-0.653

Length

226 amino acids

Sequence
(BLAST)

001: MGKIRSGQDP KAALVSEICS LSRSPIACIH INGNSVSCFI DWYLILGIQE DAEVKLIRKR YHKLVMKVHP DKNSHPKADI AFKLIHEAYL CLTDETKRRC
101: FNTDRQKNIC LKCSRLPHKT KENRPDTKPN RFCQTLRNIR DKFREENKVI ERCLKTNSAR FMGNLTEETP VFGIPNLNRF SKELPVFNPT DYKLRGYPHV
201: RNRVLDNNLS DWKMFMRSRS TCVHSS

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.