Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001216.1-P | Field mustard | cytosol | 98.23 | 98.23 |
| CDY08035 | Canola | cytosol | 39.38 | 89.9 |
| CDY34931 | Canola | cytosol | 88.05 | 88.44 |
| AT3G06778.1 | Thale cress | cytosol | 82.3 | 81.22 |
| KRH02299 | Soybean | cytosol | 46.02 | 38.81 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 42.04 | 38.15 |
| KRH12028 | Soybean | cytosol | 42.48 | 35.56 |
| KRH37055 | Soybean | cytosol | 41.59 | 34.81 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 37.17 | 34.15 |
| Solyc01g065570.2.1 | Tomato | cytosol | 35.84 | 34.03 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 33.63 | 33.04 |
| PGSC0003DMT400003010 | Potato | nucleus | 35.84 | 31.89 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 28.76 | 29.82 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 32.3 | 28.52 |
| CDX76476 | Canola | cytosol | 12.83 | 28.43 |
| CDY31307 | Canola | cytosol | 11.5 | 28.26 |
| Os03t0831000-00 | Rice | plastid | 31.86 | 27.69 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 31.86 | 26.47 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 31.86 | 26.18 |
| KXG37199 | Sorghum | cytosol | 29.2 | 24.09 |
| CDX99361 | Canola | cytosol | 15.49 | 23.97 |
| Zm00001d034749_P001 | Maize | plastid | 29.65 | 23.84 |
| TraesCS5D01G508400.1 | Wheat | plastid | 30.97 | 19.61 |
| CDY60894 | Canola | cytosol | 12.83 | 18.24 |
| CDY60893 | Canola | cytosol | 12.83 | 18.24 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 12.39 | 16.09 |
| CDX76475 | Canola | cytosol | 14.6 | 16.02 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 15.04 | 15.45 |
| CDY09330 | Canola | cytosol | 15.04 | 15.11 |
| CDX74107 | Canola | cytosol | 17.26 | 14.55 |
| CDX76473 | Canola | cytosol | 15.04 | 14.05 |
| CDX76474 | Canola | cytosol | 13.72 | 12.92 |
| CDX78942 | Canola | cytosol | 17.26 | 12.75 |
| CDX99360 | Canola | cytosol | 18.14 | 12.31 |
| CDY60890 | Canola | cytosol | 12.83 | 11.98 |
| CDX99362 | Canola | nucleus | 15.04 | 11.93 |
| CDY12569 | Canola | cytosol | 17.7 | 11.17 |
| CDY27107 | Canola | nucleus | 16.81 | 10.38 |
| CDY12382 | Canola | nucleus | 16.81 | 10.38 |
| CDY13919 | Canola | nucleus | 20.8 | 9.96 |
| CDY24701 | Canola | nucleus | 22.57 | 8.66 |
| CDY11521 | Canola | nucleus | 22.12 | 8.45 |
| CDY05255 | Canola | nucleus | 24.34 | 8.31 |
| CDY08056 | Canola | nucleus | 23.01 | 8.28 |
| CDY32121 | Canola | nucleus | 16.37 | 7.96 |
| CDY35353 | Canola | cytosol | 21.68 | 7.87 |
| CDY19683 | Canola | cytosol | 23.45 | 7.65 |
| CDX76752 | Canola | nucleus | 20.8 | 7.59 |
| CDY15046 | Canola | nucleus | 23.01 | 7.54 |
| CDX93081 | Canola | nucleus | 23.01 | 7.5 |
| CDY40464 | Canola | nucleus | 15.93 | 7.5 |
| CDX86172 | Canola | nucleus | 20.8 | 7.47 |
| CDX76994 | Canola | nucleus | 18.58 | 7.22 |
| CDX80667 | Canola | nucleus | 20.8 | 7.07 |
| CDY49460 | Canola | nucleus | 20.35 | 7.06 |
| CDX92582 | Canola | nucleus | 24.78 | 6.65 |
| CDX78941 | Canola | nucleus | 15.49 | 6.34 |
| CDX74108 | Canola | cytosol | 5.31 | 5.94 |
| CDY27796 | Canola | cytosol | 13.72 | 5.86 |
| CDY41935 | Canola | cytosol | 13.72 | 5.83 |
| CDY27809 | Canola | nucleus | 24.34 | 5.54 |
| CDY19714 | Canola | nucleus | 23.45 | 5.51 |
| CDX99992 | Canola | cytosol | 22.57 | 5.42 |
| CDY47298 | Canola | cytosol | 12.83 | 4.97 |
| CDX74632 | Canola | cytosol | 12.83 | 4.94 |
| CDX92856 | Canola | nucleus | 9.73 | 4.68 |
| CDY41919 | Canola | nucleus, plastid | 24.34 | 4.62 |
| CDX88917 | Canola | nucleus | 6.64 | 4.52 |
| CDY29872 | Canola | cytosol | 7.96 | 4.04 |
| CDY13918 | Canola | nucleus | 10.18 | 4.01 |
| CDX92586 | Canola | nucleus | 5.31 | 3.43 |
| CDX88918 | Canola | cytosol | 7.96 | 3.38 |
| CDX70843 | Canola | extracellular, golgi | 7.52 | 3.14 |
| CDX70837 | Canola | mitochondrion | 6.64 | 2.98 |
| CDX88924 | Canola | plastid | 8.85 | 2.83 |
| CDX70840 | Canola | nucleus | 7.08 | 2.74 |
| CDX88920 | Canola | nucleus | 7.08 | 2.72 |
| CDY27811 | Canola | nucleus | 5.75 | 2.71 |
| CDY51818 | Canola | nucleus | 4.42 | 2.53 |
| CDY41917 | Canola | nucleus | 7.96 | 1.88 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 6.64 | 1.76 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 3.1 | 1.68 |
| CDX70841 | Canola | nucleus | 10.62 | 1.66 |
| CDX88919 | Canola | cytosol | 10.18 | 1.45 |
| CDX92583 | Canola | mitochondrion, plastid | 1.77 | 1.15 |
| CDX92584 | Canola | mitochondrion | 0.88 | 0.57 |
Protein Annotations
| EnsemblPlants:CDX74082 | EnsemblPlantsGene:GSBRNA2T00111832001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR44137 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDX74082 |
| ProteinID:CDX74082.1 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EF09F7 | MapMan:35.2 | : |
Description
BnaA03g29650D
Coordinates
chrLK031800:+:1214119..1215339
Molecular Weight (calculated)
26394.0 Da
IEP (calculated)
10.120
GRAVY (calculated)
-0.648
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIRSGQDP KAALVSEICS LSRSPIACIH INGNSVSCFI DWYLILGIQE DAEVKLIRKR YHKLAMKVHP DKNNHPKADI AFKLIHEAYL CLTDETKRRC
101: FNTDRQKNIC LKCSRLPHKT KENRPDTKPN RFCQALRNIR DKFREENKVI ERCLKTNSAR FMGNLTEETP VFGIPNLNRF SKELPVFNPT DYKLWGYPHV
201: RNRVLDNNLS DWKMFMRSRS TCVHSS
101: FNTDRQKNIC LKCSRLPHKT KENRPDTKPN RFCQALRNIR DKFREENKVI ERCLKTNSAR FMGNLTEETP VFGIPNLNRF SKELPVFNPT DYKLWGYPHV
201: RNRVLDNNLS DWKMFMRSRS TCVHSS
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.