Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017315.1-P | Field mustard | nucleus | 97.71 | 98.32 |
| CDY32121 | Canola | nucleus | 86.46 | 89.25 |
| CDY51818 | Canola | nucleus | 54.58 | 66.16 |
| AT2G35540.1 | Thale cress | nucleus | 74.17 | 60.34 |
| CDY31307 | Canola | cytosol | 7.08 | 36.96 |
| CDX76476 | Canola | cytosol | 7.71 | 36.27 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 44.58 | 36.21 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 35.83 | 34.26 |
| KRH74334 | Soybean | cytosol, nucleus | 39.58 | 33.87 |
| KRH39596 | Soybean | nucleus | 40.42 | 33.51 |
| CDX99361 | Canola | cytosol | 9.17 | 30.14 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 26.88 | 28.86 |
| TraesCS7A01G033400.1 | Wheat | plastid | 26.88 | 28.6 |
| Os06t0111700-01 | Rice | nucleus | 28.12 | 28.24 |
| Zm00001d045553_P001 | Maize | cytosol | 27.92 | 28.15 |
| EES11310 | Sorghum | cytosol, plastid | 28.33 | 27.64 |
| TraesCS4A01G456000.1 | Wheat | plastid | 25.62 | 27.27 |
| CDY60893 | Canola | cytosol | 8.96 | 27.04 |
| CDY60894 | Canola | cytosol | 8.96 | 27.04 |
| KXG19130 | Sorghum | cytosol | 28.12 | 26.68 |
| CDX76475 | Canola | cytosol | 10.42 | 24.27 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 8.75 | 24.14 |
| CDY08035 | Canola | cytosol | 4.79 | 23.23 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 10.62 | 23.18 |
| PGSC0003DMT400047612 | Potato | nucleus | 41.46 | 21.7 |
| CDX76474 | Canola | cytosol | 10.83 | 21.67 |
| Solyc08g005300.1.1 | Tomato | nucleus | 40.42 | 21.27 |
| CDX88917 | Canola | nucleus | 14.58 | 21.08 |
| CDY60890 | Canola | cytosol | 10.21 | 20.25 |
| CDX74107 | Canola | cytosol | 11.25 | 20.15 |
| CDX86172 | Canola | nucleus | 26.04 | 19.87 |
| CDY27107 | Canola | nucleus | 15.0 | 19.67 |
| CDX99362 | Canola | nucleus | 11.67 | 19.65 |
| CDY09330 | Canola | cytosol | 9.17 | 19.56 |
| CDX76752 | Canola | nucleus | 25.21 | 19.55 |
| CDY11521 | Canola | nucleus | 23.96 | 19.43 |
| CDY35353 | Canola | cytosol | 25.21 | 19.42 |
| CDY12382 | Canola | nucleus | 14.79 | 19.4 |
| CDY19683 | Canola | cytosol | 27.71 | 19.19 |
| CDX76473 | Canola | cytosol | 9.58 | 19.01 |
| CDX78942 | Canola | cytosol | 12.08 | 18.95 |
| CDY49460 | Canola | nucleus | 25.62 | 18.86 |
| CDX74108 | Canola | cytosol | 7.92 | 18.81 |
| CDX80667 | Canola | nucleus | 26.04 | 18.8 |
| CDX76994 | Canola | nucleus | 22.71 | 18.73 |
| CDY24701 | Canola | nucleus | 22.71 | 18.51 |
| CDY08056 | Canola | nucleus | 23.96 | 18.31 |
| CDY15046 | Canola | nucleus | 26.04 | 18.12 |
| CDX93081 | Canola | nucleus | 26.04 | 18.04 |
| CDY13919 | Canola | nucleus | 17.71 | 18.01 |
| CDY05255 | Canola | nucleus | 23.54 | 17.07 |
| CDX74632 | Canola | cytosol | 20.83 | 17.04 |
| CDY47298 | Canola | cytosol | 20.62 | 16.95 |
| CDX99360 | Canola | cytosol | 11.67 | 16.82 |
| CDY12569 | Canola | cytosol | 12.5 | 16.76 |
| CDY34931 | Canola | cytosol | 7.5 | 16.0 |
| CDX74082 | Canola | cytosol | 7.5 | 15.93 |
| CDY27796 | Canola | cytosol | 17.5 | 15.88 |
| CDY41935 | Canola | cytosol | 17.5 | 15.79 |
| CDX92582 | Canola | nucleus | 25.42 | 14.49 |
| CDX92586 | Canola | nucleus | 10.42 | 14.29 |
| CDX99992 | Canola | cytosol | 26.46 | 13.5 |
| CDY19714 | Canola | nucleus | 26.88 | 13.41 |
| CDX92856 | Canola | nucleus | 13.12 | 13.4 |
| CDX70837 | Canola | mitochondrion | 13.54 | 12.9 |
| CDX88918 | Canola | cytosol | 14.17 | 12.78 |
| CDY13918 | Canola | nucleus | 15.0 | 12.57 |
| CDX70843 | Canola | extracellular, golgi | 13.96 | 12.38 |
| CDY29872 | Canola | cytosol | 11.46 | 12.33 |
| CDX78941 | Canola | nucleus | 13.96 | 12.14 |
| CDY27809 | Canola | nucleus | 25.0 | 12.1 |
| CDY27811 | Canola | nucleus | 11.88 | 11.9 |
| CDX88924 | Canola | plastid | 15.83 | 10.75 |
| CDX88920 | Canola | nucleus | 13.12 | 10.71 |
| CDX70840 | Canola | nucleus | 12.71 | 10.45 |
| CDY41919 | Canola | nucleus, plastid | 25.0 | 10.08 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 15.21 | 8.55 |
| CDY41917 | Canola | nucleus | 16.67 | 8.37 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 6.46 | 7.43 |
| CDX70841 | Canola | nucleus | 18.12 | 6.01 |
| CDX88919 | Canola | cytosol | 17.71 | 5.38 |
| CDX92583 | Canola | mitochondrion, plastid | 2.71 | 3.75 |
| CDX92584 | Canola | mitochondrion | 0.42 | 0.57 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | UniProt:A0A078HT60 | EnsemblPlants:CDY40464 | ProteinID:CDY40464 | ProteinID:CDY40464.1 |
| InterPro:DUF3444 | InterPro:DnaJ_domain | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00069685001 |
| InterPro:IPR001623 | InterPro:IPR019734 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF11926 |
| PRINTS:PR00625 | PFscan:PS50005 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 | SUPFAM:SSF46565 |
| InterPro:TPR_repeat | UniParc:UPI0004EE5EC3 | SEG:seg | : | : | : |
Description
BnaA04g20530DBnaA04g20530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT60]
Coordinates
chrLK032470:-:295831..297273
Molecular Weight (calculated)
54512.6 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.596
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPEQDPDT VNEANHHKAL AESSFTSGDL TSALNHARKA LTLSPNTEGL SSMVTAFETI TSAASASGDT PEWYKILKVE PFSHFDAVKQ QYSKLALVLH
101: PDKNPYVGCE EGFRLVNEAF KVLEDRVRRS EYDVKLRIRI QGEIGACDGG CDETASFSTV CTSKIITYSR KRKKRVDEVS ESLRRVREVE AEDEGMMTLA
201: EMQSVLKRNK QKNINREEKM GRETQEISSG DETLVEMSTN KENGKREAVK KKKKKKTNHK ELGEIVEDED FDFDKERMPR SFKKGQVWAI YDDNVPRCYC
301: LVSEVVSVSP FKVWISWLDY ESEKLISWMK NSSCGRFRVS EKALIEHVKL FSHVVNCERV AREVYQVYPR KGSVWAVYSE TDTGQKRRKT KHYEVVVCLT
401: MYSDAYGLSV ACLEKVGDSL FKRRDYGCNA VRWVEKEDVA GLLSHQIPAK KLQEDQCGAG VRESWVLDLA SVPPDLVSAT
101: PDKNPYVGCE EGFRLVNEAF KVLEDRVRRS EYDVKLRIRI QGEIGACDGG CDETASFSTV CTSKIITYSR KRKKRVDEVS ESLRRVREVE AEDEGMMTLA
201: EMQSVLKRNK QKNINREEKM GRETQEISSG DETLVEMSTN KENGKREAVK KKKKKKTNHK ELGEIVEDED FDFDKERMPR SFKKGQVWAI YDDNVPRCYC
301: LVSEVVSVSP FKVWISWLDY ESEKLISWMK NSSCGRFRVS EKALIEHVKL FSHVVNCERV AREVYQVYPR KGSVWAVYSE TDTGQKRRKT KHYEVVVCLT
401: MYSDAYGLSV ACLEKVGDSL FKRRDYGCNA VRWVEKEDVA GLLSHQIPAK KLQEDQCGAG VRESWVLDLA SVPPDLVSAT
001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.