CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045553_P001	Maize	cytosol	81.91	84.66
KXG19130	Sorghum	cytosol	73.98	71.94
TraesCS7A01G033400.1	Wheat	plastid	58.13	63.41
TraesCS4A01G456000.1	Wheat	plastid	58.13	63.41
HORVU7Hr1G005730.1	Barley	cytosol	57.32	63.09
Os06t0111700-01	Rice	nucleus	60.16	61.92
GSMUA_Achr4P05630_001	Banana	cytosol	44.92	44.02
KRH74334	Soybean	cytosol, nucleus	39.43	34.58
KRH39596	Soybean	nucleus	39.63	33.68
VIT_02s0012g02290.t01	Wine grape	nucleus	37.4	31.13
CDY32121	Canola	nucleus	28.05	29.68
Bra017315.1-P	Field mustard	nucleus	28.25	29.14
CDY51818	Canola	nucleus	23.17	28.79
CDY40464	Canola	nucleus	27.64	28.33
Bra005331.1-P	Field mustard	nucleus	29.07	27.24
AT2G35540.1	Thale cress	nucleus	32.52	27.12
OQU79981	Sorghum	cytosol	13.62	21.14
Solyc08g005300.1.1	Tomato	nucleus	37.2	20.07
PGSC0003DMT400047612	Potato	nucleus	36.99	19.85
EES07899	Sorghum	cytosol	28.05	18.78
EES10933	Sorghum	cytosol	27.24	18.51
EES10633	Sorghum	cytosol	27.03	18.1
OQU85000	Sorghum	cytosol	26.63	17.99
KXG34016	Sorghum	nucleus	24.19	14.35
EES08665	Sorghum	nucleus	19.11	13.84
EES00793	Sorghum	cytosol	22.97	11.57
EER88793	Sorghum	cytosol	22.15	11.5
KXG37199	Sorghum	cytosol	6.3	11.31
OQU83710	Sorghum	cytosol	21.34	10.78
KXG34037	Sorghum	cytosol	16.67	10.71
KXG32106	Sorghum	cytosol	21.95	10.68
KXG28768	Sorghum	nucleus	20.93	10.56
EER98396	Sorghum	nucleus	23.58	10.17
EES09993	Sorghum	nucleus	21.75	9.7
OQU83709	Sorghum	cytosol	21.75	9.21
OQU83714	Sorghum	cytosol, nucleus, plastid	15.65	7.29
KXG32108	Sorghum	cytosol	3.05	2.49

Protein Annotations

EnsemblPlants:EES11310	EnsemblPlantsGene:SORBI_3006G189100	EntrezGene:8057677	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF3444	PANTHER:PTHR10825	PANTHER:PTHR10825:SF26	PFAM:PF11926	ProteinID:EES11310	ProteinID:EES11310.1
RefSeq:XP_002446982.1	SEG:seg	UniParc:UPI0001A86D8B	UniProt:C5YEH4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:+:54362715..54364589

Molecular Weight (calculated)

53490.0 Da

IEP (calculated)

5.666

GRAVY (calculated)

-0.434

Length

492 amino acids

Sequence
(BLAST)

001: MAPGEPPAPR AAAAPGPESA AEAEHLLSLA ESELSAGRLR AARRHALRAS RLSPSCPRAS VVATAANVLL ADASSHHAAL LLPEPEDPDV SPLSASELRR
101: HFKSLVKSLR VGPDYAAANP SSAAAAEEAL GRATEAYEAL TAPPPGTFWT ACAGCRLLHE FERKYVGYRL NCPSCRRTFL AVEVPPPPEA KPPALAPAPA
201: LAPRRPPPAK KPNTEKLEMT LAEMQLQLAK KRRGAKAPES SSRDLVVVDE GEEEEEDGEE VEAENTHSDL MAVEDSDFYN FDADRGERCF KRGQLWALYA
301: DADGMPRQYA LVDGVQRGTQ FRVQIRWLDG EDGKPCGQFK VGRAETVDSV NVFSHLLACE RAAREVYQVY PRKASVWALH GGEEGDAART KYDIVVMLSG
401: YDERYGASFG YLKKVEGFRS IFTRRDIGSH AVHFLQKDDL GALSHQIPAR KVPKGEGSAL PPEDCWELDP AALPPELLRI EASNHGNDLV VV

Best Arabidopsis Sequence Match ( AT2G35540.1 )
(BLAST)

001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.