Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83710 | Sorghum | cytosol | 58.9 | 63.86 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 31.53 | 49.7 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 35.89 | 42.3 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 34.28 | 38.15 |
| KXG28768 | Sorghum | nucleus | 34.09 | 36.92 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.1 | 33.48 |
| EES00793 | Sorghum | cytosol | 30.97 | 33.47 |
| EER88793 | Sorghum | cytosol | 29.83 | 33.23 |
| Bra039476.1-P | Field mustard | cytosol | 6.44 | 33.01 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 8.52 | 32.97 |
| Os11t0573800-00 | Rice | nucleus | 28.12 | 32.35 |
| PGSC0003DMT400057888 | Potato | cytosol | 6.06 | 32.32 |
| OQU83709 | Sorghum | cytosol | 34.75 | 31.58 |
| CDX74108 | Canola | cytosol | 5.97 | 31.19 |
| Bra001194.1-P | Field mustard | cytosol | 5.87 | 30.69 |
| EES09993 | Sorghum | nucleus | 31.06 | 29.74 |
| PGSC0003DMT400094016 | Potato | nucleus | 7.95 | 28.67 |
| PGSC0003DMT400058788 | Potato | nucleus | 13.26 | 28.63 |
| CDX70837 | Canola | mitochondrion | 13.26 | 27.78 |
| CDY13918 | Canola | nucleus | 14.49 | 26.7 |
| OQU79981 | Sorghum | cytosol | 7.95 | 26.5 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.02 | 26.37 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 20.74 | 26.23 |
| Bra002183.1-P | Field mustard | nucleus | 14.02 | 26.06 |
| Bra006478.1-P | Field mustard | nucleus | 12.97 | 25.75 |
| CDX88918 | Canola | cytosol | 12.97 | 25.75 |
| CDX88917 | Canola | nucleus | 8.05 | 25.6 |
| Bra006476.1-P | Field mustard | nucleus | 14.2 | 25.51 |
| CDX88920 | Canola | nucleus | 14.2 | 25.51 |
| CDX70843 | Canola | extracellular, golgi | 12.88 | 25.14 |
| CDX70840 | Canola | nucleus | 13.64 | 24.66 |
| Bra006479.1-P | Field mustard | cytosol | 12.59 | 24.09 |
| CDY13919 | Canola | nucleus | 10.7 | 23.94 |
| PGSC0003DMT400058792 | Potato | nucleus | 20.36 | 23.45 |
| CDX92582 | Canola | nucleus | 18.56 | 23.28 |
| KXG32106 | Sorghum | cytosol | 22.16 | 23.15 |
| PGSC0003DMT400057893 | Potato | cytosol | 10.61 | 23.14 |
| Solyc01g067780.1.1 | Tomato | cytosol | 19.51 | 22.81 |
| CDX92586 | Canola | nucleus | 7.48 | 22.57 |
| KRH50936 | Soybean | nucleus | 20.17 | 22.23 |
| CDX88924 | Canola | plastid | 14.87 | 22.21 |
| Bra006473.1-P | Field mustard | plastid | 14.77 | 22.19 |
| PGSC0003DMT400057894 | Potato | cytosol | 8.14 | 22.16 |
| KRH11282 | Soybean | nucleus | 20.27 | 22.11 |
| KRH21004 | Soybean | nucleus | 20.17 | 22.0 |
| Solyc01g098340.2.1 | Tomato | cytosol | 16.67 | 22.0 |
| EER98396 | Sorghum | nucleus | 23.67 | 21.91 |
| Solyc10g007630.1.1 | Tomato | cytosol | 10.04 | 21.81 |
| PGSC0003DMT400054841 | Potato | cytosol | 10.13 | 21.66 |
| EES08665 | Sorghum | nucleus | 13.64 | 21.21 |
| PGSC0003DMT400057887 | Potato | cytosol | 16.86 | 21.14 |
| Solyc01g098310.1.1 | Tomato | cytosol | 9.09 | 21.05 |
| Solyc01g098250.2.1 | Tomato | nucleus | 19.51 | 20.75 |
| Bra024236.1-P | Field mustard | nucleus | 7.2 | 20.65 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 19.89 | 20.11 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 22.25 | 20.1 |
| CDY08056 | Canola | nucleus | 11.74 | 19.75 |
| PGSC0003DMT400057904 | Potato | nucleus | 20.08 | 19.61 |
| CDY24701 | Canola | nucleus | 10.8 | 19.35 |
| CDX99992 | Canola | cytosol | 17.23 | 19.34 |
| KRG96896 | Soybean | cytosol | 19.22 | 19.19 |
| CDY19714 | Canola | nucleus | 17.42 | 19.13 |
| KRH68628 | Soybean | cytosol | 19.13 | 18.93 |
| KXG34037 | Sorghum | cytosol | 13.45 | 18.54 |
| CDX92856 | Canola | nucleus | 8.24 | 18.51 |
| KRG92798 | Soybean | cytosol | 12.41 | 18.48 |
| CDY27809 | Canola | nucleus | 17.23 | 18.35 |
| Bra009972.1-P | Field mustard | nucleus | 10.89 | 18.28 |
| CDX86172 | Canola | nucleus | 10.89 | 18.28 |
| Bra020757.1-P | Field mustard | nucleus | 11.27 | 18.22 |
| PGSC0003DMT400038431 | Potato | nucleus | 13.45 | 18.04 |
| Bra039477.1-P | Field mustard | plastid | 9.19 | 18.03 |
| Solyc08g029220.1.1 | Tomato | nucleus | 13.45 | 18.0 |
| CDY05255 | Canola | nucleus | 11.27 | 17.98 |
| KXG32108 | Sorghum | cytosol | 10.23 | 17.91 |
| CDY27796 | Canola | cytosol | 8.9 | 17.77 |
| Bra039461.1-P | Field mustard | cytosol | 8.9 | 17.64 |
| CDX80667 | Canola | nucleus | 11.08 | 17.59 |
| CDY29872 | Canola | cytosol | 7.39 | 17.49 |
| CDY41935 | Canola | cytosol | 8.81 | 17.48 |
| EES07899 | Sorghum | cytosol | 11.84 | 17.01 |
| Solyc01g098330.1.1 | Tomato | nucleus | 6.53 | 16.83 |
| EES10933 | Sorghum | cytosol | 11.17 | 16.3 |
| CDY27811 | Canola | nucleus | 7.2 | 15.87 |
| EES11310 | Sorghum | cytosol, plastid | 7.29 | 15.65 |
| CDY41919 | Canola | nucleus, plastid | 17.42 | 15.45 |
| CDX74107 | Canola | cytosol | 3.88 | 15.3 |
| EES10633 | Sorghum | cytosol | 10.42 | 14.97 |
| OQU85000 | Sorghum | cytosol | 10.23 | 14.84 |
| KXG19130 | Sorghum | cytosol | 6.82 | 14.23 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.59 | 14.15 |
| Bra002182.1-P | Field mustard | nucleus | 14.3 | 13.92 |
| KXG34016 | Sorghum | nucleus | 10.61 | 13.51 |
| KRH34004 | Soybean | cytosol | 3.6 | 11.95 |
| KXG37199 | Sorghum | cytosol | 3.03 | 11.68 |
| Bra006477.1-P | Field mustard | cytosol | 14.96 | 11.49 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 9.09 | 11.24 |
| KRH34003 | Soybean | cytosol | 3.03 | 11.0 |
| Bra039474.1-P | Field mustard | nucleus | 15.72 | 10.88 |
| CDX70841 | Canola | nucleus | 14.87 | 10.85 |
| AT5G37760.1 | Thale cress | cytosol | 2.08 | 10.63 |
| CDX88919 | Canola | cytosol | 14.11 | 9.42 |
| AT4G19590.2 | Thale cress | nucleus | 3.12 | 8.82 |
| CDY41917 | Canola | nucleus | 7.77 | 8.58 |
Protein Annotations
| EnsemblPlants:OQU83714 | EnsemblPlantsGene:SORBI_3005G163400 | InterPro:DUF3444 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF27 | PFAM:PF11926 |
| ProteinID:OQU83714 | ProteinID:OQU83714.1 | ProteinID:OQU83715.1 | SEG:seg | UniParc:UPI000B4260D4 | UniProt:A0A1Z5RJ02 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:63869805..63874675
Molecular Weight (calculated)
118999.0 Da
IEP (calculated)
5.415
GRAVY (calculated)
-0.619
Length
1056 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSCNNKWQR IYDSVSKAKS SDDTVCNENA ASAQNQSSDH CPRKFDNPEE GNTAHEDCQQ IYRKHTSDIS TQRSAGNSMI ACACTEIFNF ETHREADRFA
0101: VGQIWALYDN FDLMPRFYAR IMHFDAHNEK IHLTWLEHDA TNKEEEKWTD KKLPVACGSF RLQPTVDTSQ DRFMFSHTVA WTKGMKGNSY DIYPNKGEVW
0201: ALYKGWSMQW SSDTDNHRSY EYEVVEVLST MSTDDGATVI PLVKIKGFVS LFARSKGMSS FFIPSSEVLR FSHSISLYRT NGNEKTGVPR GFLELDTACL
0301: PADLDEAFSS VTLVSYMFLG NMTGCVFADF TTESVDNKMD CGDEPTAQKE NPLEQNVCHS ISTDDTDDIS SEQNTSKQKK ASDANEFGRE DTSTLPNAAG
0401: SCDLHMLGKR KHDDCADSGR RRDSCINKRQ SKDNSLSDTN STADKMYNDD VAVAKAAKHV PDTMDSQGEG NATHEDCQQK YKEGATDIGN QTHGNPGIAY
0501: ECTGSIRSRD SRNNEKQRKD NSLADTNSTD DNVCSDNVAG GKNQAAEPVP STLDSQDSGN VTQGGSQQKY KKDGMDIANN MHCNPVITYK CSDFFDFRTL
0601: REVNRIAANQ IWAIYDDHDS MPRNYAQIND VDASNNIVQL TWLEHNTTNS QETRWNRKEL PVACGNFCLG ETCVLHDPPM YFSHKVSWVT GKNRNSFEIR
0701: PKRGEIWALY KESSLLQSRD TDNHQSVDYD VVEVCDDSMS VGIIVFPLVR IEGFVSLFAE SKDKSHILIP SSELLRFSHS IPCYRTNGSE KVGVGGLLEL
0801: DTAALPCGLA TVFPSVTLDS FIDLNKKKVT EFVGVTYPDS EFYNFDEDRS CEKFERGQIW ALYSSTDTFP NLYGWINKVE KEPFNVHLTW LKACSHGVDK
0901: HWLEQDIPVS CGNFVTRNST TEHCETCAFS HLVVSRCEIG PRQQVKIFPK VGEVWAIYKN WAPDWVPSSK DRPANYAIGW IKMCTEATTL FAFLTKVNGH
1001: LSVFKHDVLK RPLEIPRKEN LRFSHRIPSF RLTKDNGGKL CGFYELDPAA VPDVLL
0101: VGQIWALYDN FDLMPRFYAR IMHFDAHNEK IHLTWLEHDA TNKEEEKWTD KKLPVACGSF RLQPTVDTSQ DRFMFSHTVA WTKGMKGNSY DIYPNKGEVW
0201: ALYKGWSMQW SSDTDNHRSY EYEVVEVLST MSTDDGATVI PLVKIKGFVS LFARSKGMSS FFIPSSEVLR FSHSISLYRT NGNEKTGVPR GFLELDTACL
0301: PADLDEAFSS VTLVSYMFLG NMTGCVFADF TTESVDNKMD CGDEPTAQKE NPLEQNVCHS ISTDDTDDIS SEQNTSKQKK ASDANEFGRE DTSTLPNAAG
0401: SCDLHMLGKR KHDDCADSGR RRDSCINKRQ SKDNSLSDTN STADKMYNDD VAVAKAAKHV PDTMDSQGEG NATHEDCQQK YKEGATDIGN QTHGNPGIAY
0501: ECTGSIRSRD SRNNEKQRKD NSLADTNSTD DNVCSDNVAG GKNQAAEPVP STLDSQDSGN VTQGGSQQKY KKDGMDIANN MHCNPVITYK CSDFFDFRTL
0601: REVNRIAANQ IWAIYDDHDS MPRNYAQIND VDASNNIVQL TWLEHNTTNS QETRWNRKEL PVACGNFCLG ETCVLHDPPM YFSHKVSWVT GKNRNSFEIR
0701: PKRGEIWALY KESSLLQSRD TDNHQSVDYD VVEVCDDSMS VGIIVFPLVR IEGFVSLFAE SKDKSHILIP SSELLRFSHS IPCYRTNGSE KVGVGGLLEL
0801: DTAALPCGLA TVFPSVTLDS FIDLNKKKVT EFVGVTYPDS EFYNFDEDRS CEKFERGQIW ALYSSTDTFP NLYGWINKVE KEPFNVHLTW LKACSHGVDK
0901: HWLEQDIPVS CGNFVTRNST TEHCETCAFS HLVVSRCEIG PRQQVKIFPK VGEVWAIYKN WAPDWVPSSK DRPANYAIGW IKMCTEATTL FAFLTKVNGH
1001: LSVFKHDVLK RPLEIPRKEN LRFSHRIPSF RLTKDNGGKL CGFYELDPAA VPDVLL
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.