Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27796 | Canola | cytosol | 82.52 | 82.99 |
| Bra039461.1-P | Field mustard | cytosol | 81.02 | 80.86 |
| PGSC0003DMT400057888 | Potato | cytosol | 13.53 | 36.36 |
| CDX74108 | Canola | cytosol | 12.78 | 33.66 |
| CDY29872 | Canola | cytosol | 27.82 | 33.18 |
| CDX92856 | Canola | nucleus | 28.01 | 31.7 |
| PGSC0003DMT400089411 | Potato | cytosol | 12.97 | 30.8 |
| CDX88917 | Canola | nucleus | 15.41 | 24.7 |
| CDY27811 | Canola | nucleus | 20.86 | 23.17 |
| Solyc10g007630.1.1 | Tomato | cytosol | 19.55 | 21.4 |
| PGSC0003DMT400054841 | Potato | cytosol | 19.74 | 21.26 |
| CDX92586 | Canola | nucleus | 13.91 | 21.14 |
| CDY60893 | Canola | cytosol | 6.2 | 20.75 |
| CDY60894 | Canola | cytosol | 6.2 | 20.75 |
| CDX86172 | Canola | nucleus | 24.06 | 20.35 |
| PGSC0003DMT400057894 | Potato | cytosol | 14.47 | 19.85 |
| CDX80667 | Canola | nucleus | 23.87 | 19.1 |
| PGSC0003DMT400057893 | Potato | cytosol | 17.11 | 18.8 |
| CDY24701 | Canola | nucleus | 20.68 | 18.68 |
| CDX76476 | Canola | cytosol | 3.57 | 18.63 |
| CDY41917 | Canola | nucleus | 33.27 | 18.51 |
| CDY32121 | Canola | nucleus | 15.98 | 18.28 |
| Solyc01g098310.1.1 | Tomato | cytosol | 15.41 | 17.98 |
| CDY08056 | Canola | nucleus | 20.86 | 17.68 |
| CDX76994 | Canola | nucleus | 19.17 | 17.53 |
| CDY40464 | Canola | nucleus | 15.79 | 17.5 |
| CDY05255 | Canola | nucleus | 21.62 | 17.37 |
| CDY35353 | Canola | cytosol | 20.3 | 17.34 |
| CDY51818 | Canola | nucleus | 12.59 | 16.92 |
| GSMUA_Achr11P... | Banana | nucleus | 20.68 | 16.82 |
| CDX88918 | Canola | cytosol | 16.73 | 16.73 |
| CDY11521 | Canola | nucleus | 18.61 | 16.72 |
| CDX76752 | Canola | nucleus | 19.17 | 16.48 |
| CDX70843 | Canola | extracellular, golgi | 16.73 | 16.45 |
| CDY13918 | Canola | nucleus | 17.67 | 16.4 |
| PGSC0003DMT400038431 | Potato | nucleus | 24.25 | 16.39 |
| Solyc08g029220.1.1 | Tomato | nucleus | 24.25 | 16.35 |
| CDY49460 | Canola | nucleus | 19.92 | 16.26 |
| CDY19683 | Canola | cytosol | 21.05 | 16.16 |
| KRG92798 | Soybean | cytosol | 21.43 | 16.08 |
| CDX70837 | Canola | mitochondrion | 15.04 | 15.87 |
| CDY15046 | Canola | nucleus | 20.49 | 15.8 |
| CDX93081 | Canola | nucleus | 20.3 | 15.58 |
| CDX74632 | Canola | cytosol | 17.11 | 15.5 |
| CDY47298 | Canola | cytosol | 16.92 | 15.41 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 22.37 | 15.37 |
| Solyc01g098330.1.1 | Tomato | nucleus | 11.84 | 15.37 |
| CDX88920 | Canola | nucleus | 16.92 | 15.31 |
| CDX70840 | Canola | nucleus | 16.73 | 15.24 |
| CDY31307 | Canola | cytosol | 2.63 | 15.22 |
| CDY13919 | Canola | nucleus | 13.16 | 14.83 |
| CDY34931 | Canola | cytosol | 6.2 | 14.67 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 6.02 | 14.55 |
| EES08665 | Sorghum | nucleus | 18.42 | 14.43 |
| CDX99361 | Canola | cytosol | 3.95 | 14.38 |
| CDX99992 | Canola | cytosol | 25.0 | 14.13 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 10.9 | 13.91 |
| CDX92582 | Canola | nucleus | 21.8 | 13.78 |
| Os11t0574200-00 | Rice | cytosol | 8.46 | 13.76 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 18.8 | 13.76 |
| CDX74082 | Canola | cytosol | 5.83 | 13.72 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 22.93 | 13.62 |
| CDY19714 | Canola | nucleus | 24.44 | 13.51 |
| CDY27107 | Canola | nucleus | 9.21 | 13.39 |
| CDX76474 | Canola | cytosol | 6.02 | 13.33 |
| CDX99362 | Canola | nucleus | 7.14 | 13.33 |
| CDY08035 | Canola | cytosol | 2.44 | 13.13 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 15.79 | 13.06 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 22.93 | 12.86 |
| CDY60890 | Canola | cytosol | 5.83 | 12.81 |
| CDX88924 | Canola | plastid | 16.92 | 12.73 |
| CDY12382 | Canola | nucleus | 8.65 | 12.57 |
| CDY27809 | Canola | nucleus | 23.12 | 12.4 |
| Zm00001d040846_P001 | Maize | cytosol | 21.8 | 12.39 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 15.6 | 12.39 |
| CDX74107 | Canola | cytosol | 6.2 | 12.31 |
| EER88793 | Sorghum | cytosol | 21.62 | 12.13 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.23 | 12.12 |
| Solyc01g098250.2.1 | Tomato | nucleus | 22.56 | 12.08 |
| CDY12569 | Canola | cytosol | 8.08 | 12.01 |
| EES00793 | Sorghum | cytosol | 21.99 | 11.98 |
| Os01t0375100-01 | Rice | nucleus | 22.37 | 11.81 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 22.56 | 11.61 |
| Os06t0535300-01 | Rice | nucleus | 22.18 | 11.59 |
| Zm00001d008412_P001 | Maize | cytosol | 22.18 | 11.58 |
| Zm00001d008413_P001 | Maize | cytosol | 21.99 | 11.49 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 21.05 | 11.48 |
| KXG32106 | Sorghum | cytosol | 21.8 | 11.47 |
| OQU83710 | Sorghum | cytosol | 20.86 | 11.4 |
| KXG28768 | Sorghum | nucleus | 20.86 | 11.38 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 20.86 | 11.37 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 20.86 | 11.37 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 21.8 | 11.33 |
| PGSC0003DMT400057904 | Potato | nucleus | 22.93 | 11.29 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 21.62 | 11.24 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 21.8 | 11.22 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 20.49 | 11.18 |
| PGSC0003DMT400057887 | Potato | cytosol | 17.67 | 11.16 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 21.62 | 11.12 |
| CDX78942 | Canola | cytosol | 6.39 | 11.11 |
| Os11t0573800-00 | Rice | nucleus | 19.17 | 11.11 |
| Os11t0578100-00 | Rice | cytosol | 21.99 | 11.11 |
| KRG96896 | Soybean | cytosol | 21.8 | 10.96 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 3.57 | 10.92 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 22.56 | 10.92 |
| KRH68628 | Soybean | cytosol | 21.8 | 10.87 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 22.37 | 10.85 |
| CDX76475 | Canola | cytosol | 4.14 | 10.68 |
| CDY09330 | Canola | cytosol | 4.51 | 10.67 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 17.11 | 10.66 |
| CDX99360 | Canola | cytosol | 6.58 | 10.51 |
| EES09993 | Sorghum | nucleus | 21.43 | 10.34 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 23.12 | 10.32 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 23.12 | 10.27 |
| CDY41919 | Canola | nucleus, plastid | 22.93 | 10.24 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 22.93 | 10.23 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 15.41 | 10.19 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 22.74 | 10.17 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 21.43 | 10.08 |
| EER98396 | Sorghum | nucleus | 21.62 | 10.08 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 16.35 | 10.0 |
| CDX76473 | Canola | cytosol | 4.51 | 9.92 |
| Zm00001d019461_P002 | Maize | cytosol | 20.68 | 9.86 |
| Zm00001d052947_P001 | Maize | plastid | 15.98 | 9.83 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 15.79 | 9.67 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 16.54 | 9.58 |
| KRH34004 | Soybean | cytosol | 5.64 | 9.43 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 15.23 | 9.38 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 16.17 | 9.36 |
| KRH34003 | Soybean | cytosol | 5.08 | 9.28 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 15.04 | 9.27 |
| OQU83709 | Sorghum | cytosol | 20.11 | 9.21 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 17.48 | 8.81 |
| CDX78941 | Canola | nucleus | 9.02 | 8.7 |
| CDX92583 | Canola | mitochondrion, plastid | 5.08 | 7.78 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 6.77 | 6.67 |
| CDX70841 | Canola | nucleus | 16.35 | 6.01 |
| CDX88919 | Canola | cytosol | 17.67 | 5.95 |
| CDX92584 | Canola | mitochondrion | 0.94 | 1.43 |
Protein Annotations
| EnsemblPlants:CDY41935 | EnsemblPlantsGene:GSBRNA2T00073920001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDY41935 | ProteinID:CDY41935.1 | SEG:seg | UniParc:UPI0004EF2E21 | UniProt:A0A078HTQ2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC05g46690DBnaC05g46690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTQ2]
Coordinates
chrLK032510:-:236933..238854
Molecular Weight (calculated)
61165.6 Da
IEP (calculated)
5.320
GRAVY (calculated)
-0.845
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEADSSNLP REVTPEQDPA PATERDEHQT RKRSRGSDSM LTEGASSGLH QLLDQLQVIS SPVLRFTDKW REIHEEYAAL QSSLKKQAVR LDLKEKSLME
101: RVVELEKKED TLKDVEERER KIGLLEKSLE EKAKENDVKQ YLVSSLLRRL ECETASEAAN VLEEKEKEVE RLSKWNDERS RELEKAVEEF EAREKKLRLL
201: DEAIKEKVSE LEKKHETFDA EQILKAEEME LKRREMLAEV DKKEKSFEME LKAKAEEMEV KEKQLEEREK ELDLKQRELE KVMEKLKERE LQERAGTSGS
301: TSASSPQQRD KACEEETERI KIVDSEFHDF KNTMSSFSVD KIWALYDPQD EMPRLYAKIK RINKSRLSLD VTWLDPKEDE SVPVACGRFT RGRGGTVSYL
401: AFSHELKPII HGRNISVNPQ KGETWALFKN LGQQHKPPYR YDLVEVVVGS KDHQGVGVAY LGKVEGFVSV FKHAAQGRVV KLVIRPDEMQ RFSHRVPSVR
501: LSGDEKEGVP AGSFELDPAA VPSYILLGGE GA
101: RVVELEKKED TLKDVEERER KIGLLEKSLE EKAKENDVKQ YLVSSLLRRL ECETASEAAN VLEEKEKEVE RLSKWNDERS RELEKAVEEF EAREKKLRLL
201: DEAIKEKVSE LEKKHETFDA EQILKAEEME LKRREMLAEV DKKEKSFEME LKAKAEEMEV KEKQLEEREK ELDLKQRELE KVMEKLKERE LQERAGTSGS
301: TSASSPQQRD KACEEETERI KIVDSEFHDF KNTMSSFSVD KIWALYDPQD EMPRLYAKIK RINKSRLSLD VTWLDPKEDE SVPVACGRFT RGRGGTVSYL
401: AFSHELKPII HGRNISVNPQ KGETWALFKN LGQQHKPPYR YDLVEVVVGS KDHQGVGVAY LGKVEGFVSV FKHAAQGRVV KLVIRPDEMQ RFSHRVPSVR
501: LSGDEKEGVP AGSFELDPAA VPSYILLGGE GA
001: MLSTERTKFR SMEPATSSPL PRDTSEQDPA LAQSEDQSQG RLRVSAYDLM VVDSDLEGLD QRKEEMRNIF DDIQDKASLI LQFSLKWEEI DDRFGFLKQR
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.