CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009972.1-P	Field mustard	nucleus	100.0	100.0
CDX80667	Canola	nucleus	89.03	84.21
CDX76476	Canola	cytosol	7.79	48.04
CDY31307	Canola	cytosol	6.36	43.48
CDY19714	Canola	nucleus	65.34	42.72
CDX99992	Canola	cytosol	60.41	40.38
CDX99361	Canola	cytosol	9.22	39.73
PGSC0003DMT400057888	Potato	cytosol	12.4	39.39
CDY60893	Canola	cytosol	9.22	36.48
CDY60894	Canola	cytosol	9.22	36.48
AT5G27240.1	Thale cress	nucleus	63.59	36.23
PGSC0003DMT400089411	Potato	cytosol	11.76	33.04
CDX76475	Canola	cytosol	10.65	32.52
CDY08035	Canola	cytosol	5.09	32.32
CDY60891	Canola	cytosol, mitochondrion, nucleus	8.9	32.18
CDX74108	Canola	cytosol	10.33	32.18
CDY60010	Canola	cytosol, mitochondrion, nucleus	10.97	31.36
CDX74107	Canola	cytosol	13.2	30.97
CDX88917	Canola	nucleus	16.06	30.42
CDX76474	Canola	cytosol	10.81	28.33
CDX99362	Canola	nucleus	12.72	28.07
CDY09330	Canola	cytosol	10.02	28.0
CDY60890	Canola	cytosol	10.65	27.69
CDY27809	Canola	nucleus	43.4	27.52
CDX76473	Canola	cytosol	10.33	26.86
CDY24701	Canola	nucleus	25.12	26.83
CDX78942	Canola	cytosol	13.04	26.8
CDY08056	Canola	nucleus	26.23	26.27
CDY32121	Canola	nucleus	19.4	26.24
CDY40464	Canola	nucleus	19.87	26.04
GSMUA_Achr11P...	Banana	nucleus	26.71	25.69
CDY13919	Canola	nucleus	19.08	25.42
CDY05255	Canola	nucleus	26.07	24.77
CDX99360	Canola	cytosol	13.04	24.62
CDY27796	Canola	cytosol	20.67	24.57
CDY19683	Canola	cytosol	26.71	24.24
CDY35353	Canola	cytosol	24.01	24.24
CDY49460	Canola	nucleus	24.96	24.08
CDY41935	Canola	cytosol	20.35	24.06
CDY41919	Canola	nucleus, plastid	45.47	24.01
Solyc10g007630.1.1	Tomato	cytosol	18.44	23.87
Solyc08g029220.1.1	Tomato	nucleus	29.89	23.83
CDX92586	Canola	nucleus	13.2	23.71
PGSC0003DMT400054841	Potato	cytosol	18.6	23.68
CDX76994	Canola	nucleus	21.78	23.54
PGSC0003DMT400038431	Potato	nucleus	29.41	23.51
CDY11521	Canola	nucleus	21.94	23.31
PGSC0003DMT400057894	Potato	cytosol	14.31	23.2
GSMUA_Achr2P02410_001	Banana	cytosol	28.46	23.13
CDX76752	Canola	nucleus	22.42	22.78
Solyc01g098310.1.1	Tomato	cytosol	16.22	22.37
GSMUA_Achr5P00460_001	Banana	cytosol	25.76	22.28
CDY34931	Canola	cytosol	7.95	22.22
CDY12569	Canola	cytosol	12.56	22.07
CDY27107	Canola	nucleus	12.56	21.58
CDY29872	Canola	cytosol	15.26	21.52
PGSC0003DMT400057893	Potato	cytosol	16.53	21.49
CDY12382	Canola	nucleus	12.4	21.31
CDY27811	Canola	nucleus	16.22	21.29
EES08665	Sorghum	nucleus	22.73	21.06
CDX92856	Canola	nucleus	15.58	20.85
CDX74082	Canola	cytosol	7.47	20.8
CDX92582	Canola	nucleus	27.82	20.78
CDY51818	Canola	nucleus	12.72	20.2
CDX70843	Canola	extracellular, golgi	16.69	19.41
CDY13918	Canola	nucleus	17.49	19.2
CDX93081	Canola	nucleus	20.99	19.05
CDY15046	Canola	nucleus	20.83	18.99
Zm00001d040846_P001	Maize	cytosol	27.82	18.7
TraesCS6A01G167100.1	Wheat	cytosol	28.93	18.65
TraesCS6B01G194500.1	Wheat	cytosol	28.78	18.55
TraesCS6D01G155600.1	Wheat	cytosol	28.78	18.55
TraesCS4B01G101500.1	Wheat	cytosol	26.39	18.53
CDX88918	Canola	cytosol	15.58	18.42
CDX74632	Canola	cytosol	17.17	18.4
HORVU6Hr1G033850.1	Barley	cytosol	28.46	18.36
Solyc01g098250.2.1	Tomato	nucleus	28.93	18.33
Os06t0535300-01	Rice	nucleus	29.57	18.27
Os01t0375100-01	Rice	nucleus	29.09	18.15
CDY47298	Canola	cytosol	16.85	18.15
VIT_14s0030g00640.t01	Wine grape	nucleus	33.7	18.14
HORVU4Hr1G043860.4	Barley	cytosol	27.19	18.02
EES00793	Sorghum	cytosol	27.82	17.91
CDX88920	Canola	nucleus	16.69	17.86
Zm00001d008412_P001	Maize	cytosol	28.46	17.57
KXG32106	Sorghum	cytosol	28.14	17.51
Zm00001d008413_P001	Maize	cytosol	28.3	17.49
CDX70837	Canola	mitochondrion	13.99	17.46
TraesCS3B01G244000.4	Wheat	nucleus	28.46	17.31
TraesCS3A01G213800.3	Wheat	nucleus	28.14	17.3
PGSC0003DMT400057904	Potato	nucleus	29.73	17.3
CDX70840	Canola	nucleus	16.06	17.29
TraesCS3D01G215900.1	Wheat	nucleus	28.14	17.29
Os11t0578100-00	Rice	cytosol	28.93	17.28
EER88793	Sorghum	cytosol	25.91	17.19
KXG28768	Sorghum	nucleus	26.55	17.13
Zm00001d019461_P002	Maize	cytosol	29.73	16.76
Solyc01g098330.1.1	Tomato	nucleus	10.81	16.59
Os11t0573800-00	Rice	nucleus	24.17	16.56
OQU83710	Sorghum	cytosol	25.6	16.53
HORVU7Hr1G050080.1	Barley	nucleus	26.87	16.34
TraesCS2A01G084900.1	Wheat	nucleus	26.87	16.34
CDX78941	Canola	nucleus	14.15	16.12
EER98396	Sorghum	nucleus	28.93	15.95
EES09993	Sorghum	nucleus	27.82	15.87
HORVU3Hr1G051850.2	Barley	nucleus	28.3	15.74
TraesCS2B01G099600.2	Wheat	nucleus	27.03	15.5
TraesCS1D01G042900.1	Wheat	nucleus	29.25	15.44
TraesCS2D01G078000.1	Wheat	cytosol	15.74	15.4
TraesCS2D01G082800.1	Wheat	nucleus	26.87	15.38
TraesCS1B01G054900.1	Wheat	nucleus	29.09	15.35
TraesCS1A01G042500.1	Wheat	nucleus	28.62	15.13
Os11t0574200-00	Rice	cytosol	7.79	14.98
OQU83709	Sorghum	cytosol	27.5	14.89
HORVU1Hr1G008940.2	Barley	nucleus	28.3	14.86
CDX88924	Canola	plastid	16.69	14.85
TraesCS4A01G214500.1	Wheat	nucleus	15.58	14.63
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	9.54	14.39
Solyc01g098340.2.1	Tomato	cytosol	17.81	14.0
CDY41917	Canola	nucleus	20.51	13.49
PGSC0003DMT400057887	Potato	cytosol	17.96	13.42
Zm00001d052947_P001	Maize	plastid	17.17	12.49
CDX70844	Canola	mitochondrion, plasma membrane	16.85	12.41
TraesCS2A01G080400.1	Wheat	cytosol	15.58	12.17
HORVU2Hr1G084660.1	Barley	cytosol	16.53	11.95
HORVU2Hr1G013270.2	Barley	cytosol	15.42	11.16
TraesCS2A01G347700.1	Wheat	mitochondrion	16.22	11.1
TraesCS2D01G077700.1	Wheat	cytosol	15.1	11.01
TraesCS2B01G095100.1	Wheat	cytosol	15.1	11.0
TraesCS2B01G366100.1	Wheat	cytosol	16.06	10.99
OQU83714	Sorghum	cytosol, nucleus, plastid	18.28	10.89
TraesCS2D01G077900.1	Wheat	cytosol	6.52	7.59
CDX70841	Canola	nucleus	16.53	7.19
CDX88919	Canola	cytosol	17.33	6.89
CDX92583	Canola	mitochondrion, plastid	3.66	6.63
CDX92584	Canola	mitochondrion	1.11	2.01

Protein Annotations

EnsemblPlants:CDX86172	EnsemblPlantsGene:GSBRNA2T00144237001	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45089	PFAM:PF00226	PFAM:PF11926	PFscan:PS50076
PRINTS:PR00625	ProteinID:CDX86172	ProteinID:CDX86172.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000253F516	MapMan:35.2	:	:	:	:

Description

BnaA06g28890D

Coordinates

chrLK031845:-:168396..170431

Molecular Weight (calculated)

69940.2 Da

IEP (calculated)

7.855

GRAVY (calculated)

-0.769

Length

629 amino acids

Sequence
(BLAST)

001: MECNKEEATR AKKMAEDSMR KGDYPKAHNL VTKAQNLFSG LDGLPQMLAV CDVHCSAEKK LNGLENWYGI LQAMHFCDDA TIKKQYRKLA LLLHPDKNQF
101: PGAEAAFKLI GEASRLLSDK EKRTQYDIRH RIYSRVVSRQ VDANSGLQCG SANRNVGSTG TQQGSVATEV DKKVPSNKNG GGGENQNAEV RKPKLEEEPM
201: KNCGAEGKMN NSAELKPQPA VAEPEQSASK PVHDESVSRS SQAPSVSKDK RKRGKIVEEP LESTNVTFSD VLEDKSNPKD NIRRKSPRRS QQASCREKGR
301: SGDAISPATK RSRSCDKTSK AHEARGEGMD SPDQDFNDFE LTIGCFAVNQ VWSLYDPTDG MPRYYARITK VIDSDSEFKL GITWLDSLQD YNDNSIPIAC
401: GIFQESESQE VDDYFIFSCE MLHMRRDNNI AIYPRAGEVW AVFRGWDVSW SGGSSESRKG TYEYDFVEVL CEFEDENGLG VAYLGKVEGF VSLFRRDAKC
501: GVLQFQIPAN EMLRFSHKVP SFKMTGRESE GVPPGCFELD IAALPKDMFE VANQEMESVK KVKKSVKAVD GLKLRKSPRL VSETNKQAAS RVGQEKAEKK
601: SAKRGASCGQ PNGSRLSDET KETCKSHCG

Best Arabidopsis Sequence Match ( AT5G27240.3 )
(BLAST)

0001: MDWNKEEACR AKTLAEDKMK EGDFVGAQKL LLKAQSLFSG LESLPQMLAV CDVHNSAEKK INCLENWYGI LQVMHFADDA TIKKQVRKLA LLLHPDKNQF
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.