Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99361 | Canola | cytosol | 44.56 | 86.99 |
| CDX76476 | Canola | cytosol | 27.37 | 76.47 |
| CDY31307 | Canola | cytosol | 19.65 | 60.87 |
| CDX76475 | Canola | cytosol | 40.35 | 55.83 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 34.04 | 55.75 |
| PGSC0003DMT400039473 | Potato | nucleus | 27.72 | 53.38 |
| Solyc03g019630.1.1 | Tomato | nucleus | 27.37 | 50.0 |
| CDY09330 | Canola | cytosol | 35.79 | 45.33 |
| CDX76473 | Canola | cytosol | 37.19 | 43.8 |
| CDX78941 | Canola | nucleus | 81.05 | 41.85 |
| KRG89459 | Soybean | cytosol | 15.44 | 40.37 |
| CDX76474 | Canola | cytosol | 33.68 | 40.0 |
| CDY60890 | Canola | cytosol | 32.98 | 38.84 |
| CDX78942 | Canola | cytosol | 41.4 | 38.56 |
| CDX99360 | Canola | cytosol | 41.05 | 35.14 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 26.32 | 34.09 |
| CDY60893 | Canola | cytosol | 17.54 | 31.45 |
| CDY60894 | Canola | cytosol | 17.54 | 31.45 |
| CDY12569 | Canola | cytosol | 34.04 | 27.09 |
| CDX74107 | Canola | cytosol | 24.91 | 26.49 |
| CDY08035 | Canola | cytosol | 8.77 | 25.25 |
| CDY27107 | Canola | nucleus | 31.58 | 24.59 |
| CDY12382 | Canola | nucleus | 31.23 | 24.32 |
| CDY19683 | Canola | cytosol | 49.47 | 20.35 |
| CDY49460 | Canola | nucleus | 44.21 | 19.33 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 37.54 | 17.77 |
| GSMUA_Achr10P... | Banana | cytosol | 34.74 | 16.15 |
| CDY34931 | Canola | cytosol | 12.63 | 16.0 |
| CDY35353 | Canola | cytosol | 34.04 | 15.57 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 40.7 | 15.55 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 40.35 | 15.5 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 40.35 | 15.5 |
| CDY11521 | Canola | nucleus | 31.93 | 15.37 |
| CDX74082 | Canola | cytosol | 11.93 | 15.04 |
| CDX76752 | Canola | nucleus | 32.63 | 15.02 |
| GSMUA_Achr11P... | Banana | cytosol | 26.32 | 14.94 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 28.07 | 14.87 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 30.18 | 14.83 |
| Os03t0401200-01 | Rice | cytosol | 38.6 | 14.71 |
| Zm00001d025585_P001 | Maize | cytosol | 37.54 | 14.6 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 38.95 | 14.59 |
| Zm00001d025584_P001 | Maize | cytosol | 37.19 | 14.46 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 38.6 | 14.45 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 35.09 | 14.04 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 25.61 | 13.96 |
| EES07899 | Sorghum | cytosol | 35.79 | 13.88 |
| EES10933 | Sorghum | cytosol | 35.09 | 13.81 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 35.44 | 13.78 |
| CDY13919 | Canola | nucleus | 22.81 | 13.77 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 34.04 | 13.74 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 35.09 | 13.64 |
| CDY08056 | Canola | nucleus | 29.82 | 13.54 |
| Os02t0510000-01 | Rice | cytosol | 34.74 | 13.49 |
| Zm00001d025238_P001 | Maize | cytosol | 34.74 | 13.49 |
| EES10633 | Sorghum | cytosol | 34.74 | 13.47 |
| CDY24701 | Canola | nucleus | 27.72 | 13.41 |
| CDX76994 | Canola | nucleus | 27.37 | 13.4 |
| Zm00001d003948_P001 | Maize | cytosol | 34.39 | 13.32 |
| OQU85000 | Sorghum | cytosol | 33.33 | 13.05 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 32.98 | 12.95 |
| CDX86172 | Canola | nucleus | 28.07 | 12.72 |
| CDX93081 | Canola | nucleus | 30.88 | 12.7 |
| Os01t0923800-01 | Rice | nucleus | 32.98 | 12.63 |
| CDY15046 | Canola | nucleus | 30.53 | 12.61 |
| CDY05255 | Canola | nucleus | 29.12 | 12.54 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 33.33 | 12.01 |
| CDY32121 | Canola | nucleus | 19.3 | 11.83 |
| Zm00001d011997_P001 | Maize | nucleus | 34.04 | 11.8 |
| KXG34016 | Sorghum | nucleus | 34.04 | 11.7 |
| CDY40464 | Canola | nucleus | 19.65 | 11.67 |
| CDX80667 | Canola | nucleus | 26.67 | 11.43 |
| Zm00001d050565_P001 | Maize | cytosol | 24.21 | 10.71 |
| CDX92582 | Canola | nucleus | 30.18 | 10.21 |
| CDX99992 | Canola | cytosol | 31.93 | 9.67 |
| CDY19714 | Canola | nucleus | 31.93 | 9.46 |
| CDY27809 | Canola | nucleus | 31.58 | 9.07 |
| CDY47298 | Canola | cytosol | 17.54 | 8.56 |
| CDX74632 | Canola | cytosol | 17.54 | 8.52 |
| CDY41919 | Canola | nucleus, plastid | 30.53 | 7.3 |
| CDY41935 | Canola | cytosol | 13.33 | 7.14 |
| CDX88917 | Canola | nucleus | 7.72 | 6.63 |
| CDY27796 | Canola | cytosol | 11.93 | 6.43 |
| Os04t0388800-01 | Rice | nucleus | 11.93 | 5.69 |
| CDX74108 | Canola | cytosol | 3.86 | 5.45 |
| CDY13918 | Canola | nucleus | 9.47 | 4.71 |
| CDX92856 | Canola | nucleus | 7.37 | 4.47 |
| CDX92586 | Canola | nucleus | 5.26 | 4.29 |
| CDX70843 | Canola | extracellular, golgi | 7.02 | 3.7 |
| CDX88918 | Canola | cytosol | 6.67 | 3.57 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 10.18 | 3.4 |
| CDX88924 | Canola | plastid | 8.42 | 3.39 |
| CDX88920 | Canola | nucleus | 6.32 | 3.06 |
| CDY51818 | Canola | nucleus | 4.21 | 3.03 |
| CDX70840 | Canola | nucleus | 5.96 | 2.91 |
| CDX92583 | Canola | mitochondrion, plastid | 3.51 | 2.88 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 3.86 | 2.64 |
| CDY29872 | Canola | cytosol | 3.86 | 2.47 |
| CDY41917 | Canola | nucleus | 8.07 | 2.41 |
| CDX70841 | Canola | nucleus | 10.53 | 2.07 |
| CDX88919 | Canola | cytosol | 11.23 | 2.02 |
| CDX70837 | Canola | mitochondrion | 3.16 | 1.79 |
| CDY27811 | Canola | nucleus | 2.46 | 1.46 |
| CDX92584 | Canola | mitochondrion | 1.05 | 0.86 |
Protein Annotations
| EnsemblPlants:CDX99362 | EnsemblPlantsGene:GSBRNA2T00107667001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF5 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | ProteinID:CDX99362 | ProteinID:CDX99362.1 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EEB55B | MapMan:35.2 | : | : | : |
Description
BnaC01g11900D
Coordinates
chrLK031910:-:101901..103841
Molecular Weight (calculated)
31271.1 Da
IEP (calculated)
9.769
GRAVY (calculated)
-0.731
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNKDEAKR AMDIAEKKLS EKDYVGAKKF VTKAQNLYPH LDGLNQVSMM IHVYITAANK IINGGKESDL YGVIGVDPLA DDEALKKQYK KLALLLHPDK
101: NKCKGAEDAF KLVSNAWSLL SDKAKRAAYD QRIRKSNTGM QKPPSPSQHN RPPGSSNMFW TMCNGCKTRS ECRKDLYLNK TMRCQNCGQS SPPSVSATTK
201: TPPGSFVSPG VNHSSSPQQQ QWGGGTYYPS SSGSVHHKCS VSVSSSSGNA ASQAQERCKR GLEVDSQETI AAIESFFKKP RKDVV
101: NKCKGAEDAF KLVSNAWSLL SDKAKRAAYD QRIRKSNTGM QKPPSPSQHN RPPGSSNMFW TMCNGCKTRS ECRKDLYLNK TMRCQNCGQS SPPSVSATTK
201: TPPGSFVSPG VNHSSSPQQQ QWGGGTYYPS SSGSVHHKCS VSVSSSSGNA ASQAQERCKR GLEVDSQETI AAIESFFKKP RKDVV
001: MDSFVTVENK PLPTDMEFTM EEATKIVERK LSEKDYVGAK NFINNAFNLF PSLDARWKTM IDVYISGSNV GESDWYGVLG VDPLSDDETV KKHYKQLALL
101: LHPDKNKCYG AEGAFKLVSE AWCLLSDKLQ RSSYDQRRKK SKQGKSSKPK AADSSKQRKS RTFWTMCRSC KTKGEFLRHW NLNKAILCPN CRQIFIATEI
201: TTKEPNKSTK KSSHQQQQWS VQDKVPIKST KNASSSPSVT FTWNCSSTKA RSNCGSAANQ KLKRGFESQE TVAPAEKIIK KARTYVS
101: LHPDKNKCYG AEGAFKLVSE AWCLLSDKLQ RSSYDQRRKK SKQGKSSKPK AADSSKQRKS RTFWTMCRSC KTKGEFLRHW NLNKAILCPN CRQIFIATEI
201: TTKEPNKSTK KSSHQQQQWS VQDKVPIKST KNASSSPSVT FTWNCSSTKA RSNCGSAANQ KLKRGFESQE TVAPAEKIIK KARTYVS
Arabidopsis Description
At5g37440 [Source:UniProtKB/TrEMBL;Acc:Q9FG44]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.