Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039461.1-P | Field mustard | cytosol | 89.6 | 88.93 |
| CDY41935 | Canola | cytosol | 82.99 | 82.52 |
| PGSC0003DMT400057888 | Potato | cytosol | 13.42 | 35.86 |
| CDX74108 | Canola | cytosol | 13.04 | 34.16 |
| CDY29872 | Canola | cytosol | 26.28 | 31.17 |
| CDX92856 | Canola | nucleus | 27.03 | 30.43 |
| PGSC0003DMT400089411 | Potato | cytosol | 12.48 | 29.46 |
| CDX88917 | Canola | nucleus | 14.93 | 23.8 |
| CDY27811 | Canola | nucleus | 21.36 | 23.59 |
| CDX92586 | Canola | nucleus | 14.37 | 21.71 |
| Solyc10g007630.1.1 | Tomato | cytosol | 19.66 | 21.4 |
| CDY60893 | Canola | cytosol | 6.24 | 20.75 |
| CDY60894 | Canola | cytosol | 6.24 | 20.75 |
| CDX86172 | Canola | nucleus | 24.57 | 20.67 |
| PGSC0003DMT400054841 | Potato | cytosol | 19.28 | 20.65 |
| CDX80667 | Canola | nucleus | 24.39 | 19.4 |
| PGSC0003DMT400057894 | Potato | cytosol | 14.18 | 19.33 |
| CDY24701 | Canola | nucleus | 21.17 | 19.02 |
| PGSC0003DMT400057893 | Potato | cytosol | 17.39 | 19.01 |
| CDX76476 | Canola | cytosol | 3.59 | 18.63 |
| CDY08056 | Canola | nucleus | 21.93 | 18.47 |
| CDY41917 | Canola | nucleus | 33.27 | 18.41 |
| CDY32121 | Canola | nucleus | 16.07 | 18.28 |
| Solyc01g098310.1.1 | Tomato | cytosol | 15.5 | 17.98 |
| CDY05255 | Canola | nucleus | 22.31 | 17.82 |
| CDX76994 | Canola | nucleus | 19.28 | 17.53 |
| CDY40464 | Canola | nucleus | 15.88 | 17.5 |
| CDY35353 | Canola | cytosol | 20.23 | 17.18 |
| CDY51818 | Canola | nucleus | 12.85 | 17.17 |
| KRG92798 | Soybean | cytosol | 22.87 | 17.07 |
| CDY49460 | Canola | nucleus | 20.98 | 17.02 |
| PGSC0003DMT400038431 | Potato | nucleus | 25.14 | 16.9 |
| CDY19683 | Canola | cytosol | 21.93 | 16.74 |
| GSMUA_Achr11P... | Banana | nucleus | 20.6 | 16.67 |
| Solyc08g029220.1.1 | Tomato | nucleus | 24.76 | 16.6 |
| CDY31307 | Canola | cytosol | 2.84 | 16.3 |
| CDX88918 | Canola | cytosol | 16.07 | 15.98 |
| CDY11521 | Canola | nucleus | 17.77 | 15.88 |
| CDX76752 | Canola | nucleus | 18.53 | 15.83 |
| CDX70843 | Canola | extracellular, golgi | 16.07 | 15.71 |
| CDY13918 | Canola | nucleus | 17.01 | 15.71 |
| CDY15046 | Canola | nucleus | 20.42 | 15.65 |
| CDX93081 | Canola | nucleus | 20.42 | 15.58 |
| CDX70837 | Canola | mitochondrion | 14.74 | 15.48 |
| Solyc01g098330.1.1 | Tomato | nucleus | 11.91 | 15.37 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 22.31 | 15.25 |
| CDX70840 | Canola | nucleus | 16.82 | 15.24 |
| CDX88920 | Canola | nucleus | 16.82 | 15.14 |
| CDY47298 | Canola | cytosol | 16.64 | 15.07 |
| CDX74632 | Canola | cytosol | 16.64 | 14.99 |
| CDY13919 | Canola | nucleus | 12.85 | 14.41 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 11.34 | 14.39 |
| CDX99361 | Canola | cytosol | 3.97 | 14.38 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 19.66 | 14.31 |
| CDY34931 | Canola | cytosol | 6.05 | 14.22 |
| CDX99992 | Canola | cytosol | 25.14 | 14.13 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 5.86 | 14.09 |
| Os11t0574200-00 | Rice | cytosol | 8.7 | 14.07 |
| EES08665 | Sorghum | nucleus | 17.96 | 13.99 |
| CDX74082 | Canola | cytosol | 5.86 | 13.72 |
| CDY19714 | Canola | nucleus | 24.57 | 13.51 |
| CDX92582 | Canola | nucleus | 21.36 | 13.42 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 22.5 | 13.28 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 16.07 | 13.22 |
| CDY08035 | Canola | cytosol | 2.46 | 13.13 |
| CDY12382 | Canola | nucleus | 8.7 | 12.57 |
| CDY27107 | Canola | nucleus | 8.7 | 12.57 |
| CDX76474 | Canola | cytosol | 5.67 | 12.5 |
| CDY27809 | Canola | nucleus | 23.44 | 12.5 |
| CDX88924 | Canola | plastid | 16.64 | 12.45 |
| CDY60890 | Canola | cytosol | 5.67 | 12.4 |
| Zm00001d040846_P001 | Maize | cytosol | 21.93 | 12.39 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.53 | 12.25 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 21.93 | 12.22 |
| Solyc01g098250.2.1 | Tomato | nucleus | 22.87 | 12.19 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 15.31 | 12.09 |
| EER88793 | Sorghum | cytosol | 21.55 | 12.03 |
| EES00793 | Sorghum | cytosol | 22.12 | 11.98 |
| CDX74107 | Canola | cytosol | 6.05 | 11.94 |
| CDX99362 | Canola | nucleus | 6.43 | 11.93 |
| Os01t0375100-01 | Rice | nucleus | 22.5 | 11.81 |
| OQU83710 | Sorghum | cytosol | 21.55 | 11.7 |
| Zm00001d008412_P001 | Maize | cytosol | 22.12 | 11.48 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 21.17 | 11.48 |
| KXG32106 | Sorghum | cytosol | 21.93 | 11.47 |
| PGSC0003DMT400057904 | Potato | nucleus | 23.44 | 11.47 |
| Os06t0535300-01 | Rice | nucleus | 21.93 | 11.39 |
| Zm00001d008413_P001 | Maize | cytosol | 21.93 | 11.39 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 20.98 | 11.37 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 20.98 | 11.37 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 21.93 | 11.33 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 22.12 | 11.32 |
| PGSC0003DMT400057887 | Potato | cytosol | 17.96 | 11.28 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 20.79 | 11.28 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 21.74 | 11.24 |
| Os11t0573800-00 | Rice | nucleus | 19.47 | 11.22 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 21.74 | 11.12 |
| KXG28768 | Sorghum | nucleus | 20.42 | 11.08 |
| KRG96896 | Soybean | cytosol | 22.12 | 11.06 |
| KRH68628 | Soybean | cytosol | 22.12 | 10.97 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 21.36 | 10.93 |
| Os11t0578100-00 | Rice | cytosol | 21.55 | 10.83 |
| CDX78942 | Canola | cytosol | 6.24 | 10.78 |
| CDX76475 | Canola | cytosol | 4.16 | 10.68 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 16.07 | 10.56 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 21.93 | 10.55 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 21.74 | 10.48 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 3.4 | 10.34 |
| EER98396 | Sorghum | nucleus | 22.12 | 10.25 |
| CDY41919 | Canola | nucleus, plastid | 23.06 | 10.24 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 23.06 | 10.23 |
| CDY09330 | Canola | cytosol | 4.35 | 10.22 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 22.87 | 10.15 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 22.68 | 10.08 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 21.55 | 10.08 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 16.26 | 10.07 |
| EES09993 | Sorghum | nucleus | 20.98 | 10.06 |
| Zm00001d052947_P001 | Maize | plastid | 16.45 | 10.06 |
| CDY12569 | Canola | cytosol | 6.81 | 10.06 |
| Zm00001d019461_P002 | Maize | cytosol | 21.17 | 10.04 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 22.68 | 10.02 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 16.45 | 10.0 |
| KRH34003 | Soybean | cytosol | 5.48 | 9.97 |
| CDX76473 | Canola | cytosol | 4.54 | 9.92 |
| CDX99360 | Canola | cytosol | 6.24 | 9.91 |
| KRH34004 | Soybean | cytosol | 5.86 | 9.75 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 15.88 | 9.73 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 15.88 | 9.72 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 15.88 | 9.67 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 16.45 | 9.47 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 16.07 | 9.25 |
| OQU83709 | Sorghum | cytosol | 19.66 | 8.95 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 17.77 | 8.9 |
| CDX78941 | Canola | nucleus | 8.32 | 7.97 |
| CDX92583 | Canola | mitochondrion, plastid | 4.91 | 7.49 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 6.99 | 6.85 |
| CDX88919 | Canola | cytosol | 17.77 | 5.95 |
| CDX70841 | Canola | nucleus | 16.07 | 5.87 |
| CDX92584 | Canola | mitochondrion | 0.95 | 1.43 |
Protein Annotations
| EnsemblPlants:CDY27796 | EnsemblPlantsGene:GSBRNA2T00038602001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDY27796 | ProteinID:CDY27796.1 | SEG:seg | UniParc:UPI0004EEB6FA | UniProt:A0A078GQU6 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g32050DBnaA05g32050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQU6]
Coordinates
chrLK032209:+:484234..486181
Molecular Weight (calculated)
61011.9 Da
IEP (calculated)
5.975
GRAVY (calculated)
-0.871
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MEADSSNLSR EVTPEQDPVT ERDEHQTRKR IRGSDSMVTE GASSGGLHQL LDQLQVITSP VLQFTDKWRE IHEEYATLQS SLKKQAVRLD LKEKSLMERV
101: VELEKKEEML KDVEEREMKI GLLEKSLEEK AKDNDVKQYL KGKKVDEDKS RELEKAVKEI EAREKKLRLL DEAMKEKVIE LEKKQKAFEG EQLVKAEEME
201: LKRREMLAEL EKKEKSFEVE LKAKAEEMEL KCKEKTAALE KKEKSFEMEL KAKAEDMKVK EKQLEEKEKE LELKQRELED KLKEREKETN SACLASASAS
301: SPQQRDKACE EEEPERIKIV DSEFHDFKNT MSSFSVDKIW ALYDPQDEMP RLYAKIKRIN KSRLSLDVTW LDPKDDESVP IACGRFTHGR RETVSYLTFS
401: HELKPIIHGR NISVNPKKGE TWALFKNLGQ QHKPPYRYDL VEVVVGFKDR QGVGVAYLGK VEGFVSVFKH SAKDRVVKRV IAPDEMQRFS HRVPSVRLSG
501: DEKEGVPAGS FELDPAAVPS YILLGGEGA
101: VELEKKEEML KDVEEREMKI GLLEKSLEEK AKDNDVKQYL KGKKVDEDKS RELEKAVKEI EAREKKLRLL DEAMKEKVIE LEKKQKAFEG EQLVKAEEME
201: LKRREMLAEL EKKEKSFEVE LKAKAEEMEL KCKEKTAALE KKEKSFEMEL KAKAEDMKVK EKQLEEKEKE LELKQRELED KLKEREKETN SACLASASAS
301: SPQQRDKACE EEEPERIKIV DSEFHDFKNT MSSFSVDKIW ALYDPQDEMP RLYAKIKRIN KSRLSLDVTW LDPKDDESVP IACGRFTHGR RETVSYLTFS
401: HELKPIIHGR NISVNPKKGE TWALFKNLGQ QHKPPYRYDL VEVVVGFKDR QGVGVAYLGK VEGFVSVFKH SAKDRVVKRV IAPDEMQRFS HRVPSVRLSG
501: DEKEGVPAGS FELDPAAVPS YILLGGEGA
001: MLSTERTKFR SMEPATSSPL PRDTSEQDPA LAQSEDQSQG RLRVSAYDLM VVDSDLEGLD QRKEEMRNIF DDIQDKASLI LQFSLKWEEI DDRFGFLKQR
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
101: AMEKEVSVRN QILELEKKEE RLRLVEERER KIEASFSTLQ EKGNESDLIL LMEANVMRLV LQMQFEQVVV AQLNAQENFL GSLHDSMMKK HEELMTELEA
201: RKNEVALISK TIDAKTCDLD MKVKDFDLKQ TTESERMRKE TELMETSLKQ LEARENELRL LNETIQGKSM ELEKKEVNFQ LKHEAAARET EVKNKFLELK
301: EKKLEEREQH LELKQRKKEK PAIRAETRKR SRLEYESPLS AEKGRYAETL IRPGKKQVQK REAHEIIYID EDEPFNCPDP DFHDFNNTMS SFAVGQVWAL
401: YDPVDDMPRY YAEIRKVLQP QLSLRVTWLE SLQTTEEPIP ACGRFEHGKS ETSSHLMFSH EMYHTIRGQY VTINPRKGET WALFGDWTKT WKSHSEQQKT
501: PYSYDFVEVV TEFDSDRGIG VAYLGRVEGF TSVYERAAQN GLVEIMISCD EMLRFSHRVP SFKMTGDEKE GVPAGSFELD PAAVPRVYLK DAKVKEEKME
601: PIVLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.