Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27107 | Canola | nucleus | 92.35 | 92.35 |
| AT5G37380.6 | Thale cress | nucleus | 71.86 | 61.02 |
| CDX76476 | Canola | cytosol | 13.93 | 50.0 |
| CDX99361 | Canola | cytosol | 18.31 | 45.89 |
| CDY31307 | Canola | cytosol | 11.48 | 45.65 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 20.49 | 43.1 |
| CDX76475 | Canola | cytosol | 23.5 | 41.75 |
| CDY09330 | Canola | cytosol | 21.58 | 35.11 |
| CDX78942 | Canola | cytosol | 28.42 | 33.99 |
| CDX76473 | Canola | cytosol | 22.4 | 33.88 |
| CDX76474 | Canola | cytosol | 21.58 | 32.92 |
| CDX99360 | Canola | cytosol | 28.69 | 31.53 |
| CDX99362 | Canola | nucleus | 24.32 | 31.23 |
| CDY60890 | Canola | cytosol | 20.22 | 30.58 |
| CDX74107 | Canola | cytosol | 22.13 | 30.22 |
| CDY08035 | Canola | cytosol | 7.65 | 28.28 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 16.12 | 26.82 |
| CDY12569 | Canola | cytosol | 25.14 | 25.7 |
| CDY60893 | Canola | cytosol | 10.66 | 24.53 |
| CDY60894 | Canola | cytosol | 10.66 | 24.53 |
| GSMUA_Achr10P... | Banana | cytosol | 37.43 | 22.35 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 35.52 | 21.59 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 31.42 | 21.38 |
| GSMUA_Achr11P... | Banana | cytosol | 28.96 | 21.12 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 39.89 | 20.51 |
| Os03t0401200-01 | Rice | cytosol | 41.26 | 20.19 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 40.44 | 19.95 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 40.44 | 19.95 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 40.16 | 19.71 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 40.71 | 19.58 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 40.44 | 19.45 |
| CDY11521 | Canola | nucleus | 31.42 | 19.43 |
| Zm00001d025584_P001 | Maize | cytosol | 38.25 | 19.1 |
| Zm00001d025585_P001 | Maize | cytosol | 37.7 | 18.83 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 29.78 | 18.79 |
| EES07899 | Sorghum | cytosol | 37.43 | 18.64 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 26.5 | 18.55 |
| CDY19683 | Canola | cytosol | 34.97 | 18.47 |
| CDX76752 | Canola | nucleus | 31.15 | 18.42 |
| CDX78941 | Canola | nucleus | 27.6 | 18.3 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 34.97 | 18.13 |
| CDY35353 | Canola | cytosol | 30.6 | 17.98 |
| EES10933 | Sorghum | cytosol | 34.97 | 17.68 |
| CDY49460 | Canola | nucleus | 31.42 | 17.64 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 35.25 | 17.6 |
| Os02t0510000-01 | Rice | cytosol | 35.25 | 17.57 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 34.97 | 17.46 |
| CDY34931 | Canola | cytosol | 10.66 | 17.33 |
| Zm00001d025238_P001 | Maize | cytosol | 34.43 | 17.17 |
| EES10633 | Sorghum | cytosol | 34.15 | 17.01 |
| CDX74082 | Canola | cytosol | 10.38 | 16.81 |
| Zm00001d003948_P001 | Maize | cytosol | 33.61 | 16.71 |
| Os01t0923800-01 | Rice | nucleus | 33.33 | 16.4 |
| CDX76994 | Canola | nucleus | 25.96 | 16.32 |
| OQU85000 | Sorghum | cytosol | 31.69 | 15.93 |
| CDY32121 | Canola | nucleus | 19.95 | 15.7 |
| CDY08056 | Canola | nucleus | 26.78 | 15.61 |
| CDY24701 | Canola | nucleus | 24.86 | 15.45 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 30.33 | 15.29 |
| CDY15046 | Canola | nucleus | 28.42 | 15.07 |
| CDX93081 | Canola | nucleus | 28.14 | 14.86 |
| CDY40464 | Canola | nucleus | 19.4 | 14.79 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 30.6 | 14.16 |
| CDY05255 | Canola | nucleus | 25.41 | 14.05 |
| CDY13919 | Canola | nucleus | 18.03 | 13.98 |
| Zm00001d011997_P001 | Maize | nucleus | 30.05 | 13.38 |
| KXG34016 | Sorghum | nucleus | 30.05 | 13.27 |
| Zm00001d050565_P001 | Maize | cytosol | 22.95 | 13.04 |
| CDY47298 | Canola | cytosol | 19.95 | 12.5 |
| CDX74632 | Canola | cytosol | 19.95 | 12.44 |
| CDX86172 | Canola | nucleus | 21.31 | 12.4 |
| CDX80667 | Canola | nucleus | 21.31 | 11.73 |
| CDX99992 | Canola | cytosol | 26.78 | 10.41 |
| CDY19714 | Canola | nucleus | 27.32 | 10.39 |
| CDY27809 | Canola | nucleus | 27.05 | 9.98 |
| CDX92582 | Canola | nucleus | 21.86 | 9.5 |
| Os04t0388800-01 | Rice | nucleus | 15.03 | 9.2 |
| CDY27796 | Canola | cytosol | 12.57 | 8.7 |
| CDY41935 | Canola | cytosol | 12.57 | 8.65 |
| CDY41919 | Canola | nucleus, plastid | 27.6 | 8.48 |
| CDX88917 | Canola | nucleus | 5.74 | 6.33 |
| CDX92856 | Canola | nucleus | 6.28 | 4.89 |
| CDY51818 | Canola | nucleus | 4.92 | 4.55 |
| CDY29872 | Canola | cytosol | 5.46 | 4.48 |
| CDX88924 | Canola | plastid | 7.92 | 4.1 |
| CDY13918 | Canola | nucleus | 5.74 | 3.66 |
| CDY41917 | Canola | nucleus | 9.56 | 3.66 |
| CDX70843 | Canola | extracellular, golgi | 5.19 | 3.51 |
| CDX92586 | Canola | nucleus | 3.28 | 3.43 |
| CDX88918 | Canola | cytosol | 4.92 | 3.38 |
| CDX70840 | Canola | nucleus | 4.92 | 3.08 |
| CDX88920 | Canola | nucleus | 4.92 | 3.06 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 7.1 | 3.04 |
| CDX74108 | Canola | cytosol | 1.37 | 2.48 |
| CDX70841 | Canola | nucleus | 8.47 | 2.14 |
| CDX88919 | Canola | cytosol | 8.74 | 2.02 |
| Solyc01g057650.1.1 | Tomato | cytosol | 0.82 | 1.75 |
| CDY27811 | Canola | nucleus | 1.91 | 1.46 |
| CDX92583 | Canola | mitochondrion, plastid | 1.37 | 1.44 |
| CDX70837 | Canola | mitochondrion | 1.91 | 1.39 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 1.09 | 0.96 |
| CDX92584 | Canola | mitochondrion | 0.55 | 0.57 |
Protein Annotations
| EnsemblPlants:CDY12382 | EnsemblPlantsGene:GSBRNA2T00061588001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| ProteinID:CDY12382 | ProteinID:CDY12382.1 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EE72FC |
| UniProt:A0A078FHC2 | MapMan:35.2 | : | : | : | : |
Description
BnaC08g08230DBnaC08g08230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHC2]
Coordinates
chrLK032021:+:491608..493538
Molecular Weight (calculated)
41313.4 Da
IEP (calculated)
10.521
GRAVY (calculated)
-0.875
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MECNRDEALR AKEIAESKFK MRDFAGAKKF ALKAQSLFPE MEGLSQMLST FHVFIAAETK VNGEVDWYGI LDANPRDDNE TLKKKYRKLA LMLHPDKNSS
101: LGADGAFKHV SEAWKFLSDK EKRAAYDRKK SLYTMYNKVS PQPPPPPPTQ KKNNPPPTQK SNPQKPAQKT GQSDHHHTTA ADTFWTVCRR CMTQYEYLRT
201: YANCNLLCPN CLQSFSAVQV RKPGMLSHWS RLNSAKPKSA DAAIPGVFNN SKWAFSRTSS AAHAACMVQK VYEKVKKDRE EAEATDKRGR KNAKRKCTTT
301: DSSLKKRKVI GETETGVSGG RKVVYYAVAG ENGRNMGKLH VTRERASPRL KKKISKEAVT REVKSR
101: LGADGAFKHV SEAWKFLSDK EKRAAYDRKK SLYTMYNKVS PQPPPPPPTQ KKNNPPPTQK SNPQKPAQKT GQSDHHHTTA ADTFWTVCRR CMTQYEYLRT
201: YANCNLLCPN CLQSFSAVQV RKPGMLSHWS RLNSAKPKSA DAAIPGVFNN SKWAFSRTSS AAHAACMVQK VYEKVKKDRE EAEATDKRGR KNAKRKCTTT
301: DSSLKKRKVI GETETGVSGG RKVVYYAVAG ENGRNMGKLH VTRERASPRL KKKISKEAVT REVKSR
001: MECNKDEATR AKEIAENKFK MKDIAGAKKF ALKAQNLYPE IEGVSQMLAT LDVYIAAENK VNEDVDWYGI LNASPRDDDE TLKRKYRKLA LMLHPDKNKS
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R
Arabidopsis Description
At5g37380/MNJ8_170 [Source:UniProtKB/TrEMBL;Acc:Q9FHS7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.