Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74632 | Canola | cytosol | 97.09 | 96.59 |
| Bra035378.1-P | Field mustard | cytosol | 93.66 | 79.51 |
| CDY15046 | Canola | nucleus | 68.15 | 57.68 |
| CDX93081 | Canola | nucleus | 68.15 | 57.43 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 51.54 | 43.37 |
| KRH73997 | Soybean | nucleus | 49.83 | 41.28 |
| KRH14137 | Soybean | nucleus | 49.49 | 40.88 |
| Solyc05g040050.1.1 | Tomato | nucleus | 48.12 | 35.89 |
| Solyc07g047690.1.1 | Tomato | nucleus | 47.95 | 35.53 |
| PGSC0003DMT400092645 | Potato | cytosol | 6.85 | 31.01 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 31.51 | 30.56 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 26.71 | 29.83 |
| CDX76994 | Canola | nucleus | 29.28 | 29.38 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 22.09 | 29.32 |
| CDX74108 | Canola | cytosol | 10.1 | 29.21 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 26.37 | 28.62 |
| Os04t0388800-01 | Rice | nucleus | 29.28 | 28.6 |
| GSMUA_Achr11P... | Banana | cytosol | 24.14 | 28.09 |
| CDY35353 | Canola | cytosol | 29.62 | 27.77 |
| OQU85000 | Sorghum | cytosol | 34.25 | 27.47 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 34.42 | 27.42 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 34.42 | 27.42 |
| Os02t0510000-01 | Rice | cytosol | 34.42 | 27.38 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 26.88 | 27.07 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 32.71 | 27.05 |
| Zm00001d003948_P001 | Maize | cytosol | 34.08 | 27.04 |
| CDY49460 | Canola | nucleus | 29.97 | 26.84 |
| EES10633 | Sorghum | cytosol | 33.73 | 26.8 |
| Zm00001d025238_P001 | Maize | cytosol | 33.22 | 26.43 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 33.39 | 26.28 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 33.39 | 26.28 |
| Zm00001d050565_P001 | Maize | cytosol | 28.94 | 26.24 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 33.22 | 26.01 |
| EES10933 | Sorghum | cytosol | 31.68 | 25.55 |
| Os03t0401200-01 | Rice | cytosol | 32.71 | 25.53 |
| Zm00001d025584_P001 | Maize | cytosol | 32.02 | 25.51 |
| Zm00001d025585_P001 | Maize | cytosol | 31.85 | 25.38 |
| EES07899 | Sorghum | cytosol | 31.85 | 25.31 |
| GSMUA_Achr10P... | Banana | cytosol | 26.54 | 25.29 |
| CDY19683 | Canola | cytosol | 29.97 | 25.25 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 32.71 | 25.1 |
| CDY11521 | Canola | nucleus | 25.34 | 25.0 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 32.19 | 24.7 |
| CDX76752 | Canola | nucleus | 25.86 | 24.39 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 7.02 | 23.56 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 29.11 | 23.42 |
| CDX88917 | Canola | nucleus | 13.18 | 23.19 |
| Os01t0923800-01 | Rice | nucleus | 29.28 | 22.98 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 27.74 | 22.75 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 28.94 | 21.37 |
| CDY27107 | Canola | nucleus | 13.18 | 21.04 |
| Zm00001d011997_P001 | Maize | nucleus | 29.45 | 20.92 |
| CDX92586 | Canola | nucleus | 12.5 | 20.86 |
| CDY40464 | Canola | nucleus | 16.95 | 20.62 |
| CDY32121 | Canola | nucleus | 16.27 | 20.43 |
| CDX76474 | Canola | cytosol | 8.39 | 20.42 |
| KXG34016 | Sorghum | nucleus | 28.94 | 20.39 |
| CDY08056 | Canola | nucleus | 21.75 | 20.22 |
| CDY51818 | Canola | nucleus | 13.7 | 20.2 |
| CDY24701 | Canola | nucleus | 20.21 | 20.03 |
| CDY12382 | Canola | nucleus | 12.5 | 19.95 |
| CDX76475 | Canola | cytosol | 7.02 | 19.9 |
| CDY60890 | Canola | cytosol | 8.22 | 19.83 |
| CDY05255 | Canola | nucleus | 21.58 | 19.03 |
| CDY12569 | Canola | cytosol | 11.3 | 18.44 |
| CDX99362 | Canola | nucleus | 8.56 | 17.54 |
| CDX92856 | Canola | nucleus | 14.04 | 17.45 |
| CDY41935 | Canola | cytosol | 15.41 | 16.92 |
| CDX86172 | Canola | nucleus | 18.15 | 16.85 |
| CDY27796 | Canola | cytosol | 15.07 | 16.64 |
| CDY29872 | Canola | cytosol | 12.67 | 16.59 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 6.16 | 16.36 |
| CDX80667 | Canola | nucleus | 18.32 | 16.09 |
| CDX74107 | Canola | cytosol | 7.36 | 16.04 |
| CDX78942 | Canola | cytosol | 8.39 | 16.01 |
| CDY27811 | Canola | nucleus | 13.01 | 15.87 |
| CDX76473 | Canola | cytosol | 6.51 | 15.7 |
| CDY09330 | Canola | cytosol | 5.82 | 15.11 |
| CDX70837 | Canola | mitochondrion | 13.01 | 15.08 |
| CDY13919 | Canola | nucleus | 12.16 | 15.04 |
| CDX99360 | Canola | cytosol | 8.56 | 15.02 |
| CDY13918 | Canola | nucleus | 14.38 | 14.66 |
| CDX88918 | Canola | cytosol | 13.18 | 14.47 |
| CDX70843 | Canola | extracellular, golgi | 12.84 | 13.86 |
| CDY60893 | Canola | cytosol | 3.77 | 13.84 |
| CDY60894 | Canola | cytosol | 3.77 | 13.84 |
| CDX70840 | Canola | nucleus | 13.7 | 13.7 |
| CDX88920 | Canola | nucleus | 13.7 | 13.61 |
| CDX99992 | Canola | cytosol | 21.58 | 13.39 |
| CDY34931 | Canola | cytosol | 5.14 | 13.33 |
| CDX92582 | Canola | nucleus | 19.18 | 13.3 |
| CDY19714 | Canola | nucleus | 21.75 | 13.2 |
| CDX74082 | Canola | cytosol | 4.97 | 12.83 |
| CDX76476 | Canola | cytosol | 2.23 | 12.75 |
| CDX88924 | Canola | plastid | 14.9 | 12.31 |
| CDX78941 | Canola | nucleus | 11.47 | 12.14 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 8.39 | 11.75 |
| CDY27809 | Canola | nucleus | 19.69 | 11.59 |
| CDX99361 | Canola | cytosol | 2.74 | 10.96 |
| CDY41919 | Canola | nucleus, plastid | 19.86 | 9.74 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 14.21 | 9.72 |
| CDY41917 | Canola | nucleus | 14.9 | 9.1 |
| CDY08035 | Canola | cytosol | 1.2 | 7.07 |
| CDX70841 | Canola | nucleus | 15.24 | 6.15 |
| CDX92583 | Canola | mitochondrion, plastid | 3.6 | 6.05 |
| CDX88919 | Canola | cytosol | 15.75 | 5.82 |
| CDY31307 | Canola | cytosol | 0.34 | 2.17 |
| CDX92584 | Canola | mitochondrion | 0.68 | 1.15 |
Protein Annotations
| EnsemblPlants:CDY47298 | EnsemblPlantsGene:GSBRNA2T00087125001 | InterPro:DUF3444 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF2 | PFAM:PF11926 |
| ProteinID:CDY47298 | ProteinID:CDY47298.1 | SEG:seg | UniParc:UPI0004EE334E | UniProt:A0A078IDM6 | MapMan:35.2 |
Description
BnaC04g29790DBnaC04g29790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDM6]
Coordinates
chrLK032706:-:161395..163452
Molecular Weight (calculated)
65672.4 Da
IEP (calculated)
8.148
GRAVY (calculated)
-0.530
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAYREEALK AKQFAERRFA EKDFTGARSY ALRARSLFPD LEGLSQMLTT YDSRHSTRRW LFCFIPTRTN ALELVGLSRS YPKLGLSSRM ISERLDTFWT
101: VCTSCKVQYE YLRKYVNKRL SCKNCRGAFI AVETGPGPVS ASVQYAPPAH TTSNGYGSHG YDFVSGMPAN PTYFLGQYPA HGYEYDWNSY VGTSPGNLES
201: NRMSSVSSGY PSKLANGVVL TKAPRPEKKR NVSLGSSGNG FVENTESKTT KLDGNKEPES KHVGQSHGKS RRWSAPATGL DTRKLLISKA KTNIQQRLEM
301: MRLASVAAEA MATEDAAPLD EVKASSMVGD GVFGIGSHVS SGHQSVRKIN GPITVPDSDF HDFDSNRSEE CFEARQIWAI YDEDDGMPRL YCVVREVLSV
401: QPFKIDIAYL SSKTDIEFGT MKWVQYGFTK SCGHFRIRNT DIVEHVNIFS HLLKDKKTGR GGCVRIFPKT GEIWAVYKNW SPDWNNSTPD EVRHQYEMVE
501: ILDEYSEQFG VCIASLVKVE GYKTVYCRRE ESTKWIPRKE MLRFSHQVPS WFLKEETSSV PGNCWDLDPA AIPEELLGTG AGTD
101: VCTSCKVQYE YLRKYVNKRL SCKNCRGAFI AVETGPGPVS ASVQYAPPAH TTSNGYGSHG YDFVSGMPAN PTYFLGQYPA HGYEYDWNSY VGTSPGNLES
201: NRMSSVSSGY PSKLANGVVL TKAPRPEKKR NVSLGSSGNG FVENTESKTT KLDGNKEPES KHVGQSHGKS RRWSAPATGL DTRKLLISKA KTNIQQRLEM
301: MRLASVAAEA MATEDAAPLD EVKASSMVGD GVFGIGSHVS SGHQSVRKIN GPITVPDSDF HDFDSNRSEE CFEARQIWAI YDEDDGMPRL YCVVREVLSV
401: QPFKIDIAYL SSKTDIEFGT MKWVQYGFTK SCGHFRIRNT DIVEHVNIFS HLLKDKKTGR GGCVRIFPKT GEIWAVYKNW SPDWNNSTPD EVRHQYEMVE
501: ILDEYSEQFG VCIASLVKVE GYKTVYCRRE ESTKWIPRKE MLRFSHQVPS WFLKEETSSV PGNCWDLDPA AIPEELLGTG AGTD
001: MPTNSTYFLG QYPAHGYEYV TNESYDWSSY VGTSPGNLES NRMSSASNGY PYKLNNGVVL IKASRPEKKR NVGLGSSGNG FVENITKSNP ESKATNLDAK
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G35753]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.