Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47298 | Canola | cytosol | 96.59 | 97.09 |
| Bra035378.1-P | Field mustard | cytosol | 94.89 | 80.96 |
| CDY15046 | Canola | nucleus | 67.97 | 57.83 |
| CDX93081 | Canola | nucleus | 67.97 | 57.58 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 51.62 | 43.66 |
| KRH73997 | Soybean | nucleus | 49.57 | 41.28 |
| KRH14137 | Soybean | nucleus | 49.23 | 40.88 |
| Solyc07g047690.1.1 | Tomato | nucleus | 48.38 | 36.04 |
| Solyc05g040050.1.1 | Tomato | nucleus | 47.87 | 35.89 |
| PGSC0003DMT400092645 | Potato | cytosol | 6.81 | 31.01 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 31.35 | 30.56 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 26.58 | 29.83 |
| CDX76994 | Canola | nucleus | 29.47 | 29.73 |
| CDX74108 | Canola | cytosol | 10.05 | 29.21 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 21.81 | 29.09 |
| Os04t0388800-01 | Rice | nucleus | 29.47 | 28.93 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 26.41 | 28.81 |
| GSMUA_Achr11P... | Banana | cytosol | 24.19 | 28.29 |
| CDY35353 | Canola | cytosol | 29.81 | 28.09 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 34.75 | 27.83 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 34.75 | 27.83 |
| Os02t0510000-01 | Rice | cytosol | 34.58 | 27.66 |
| OQU85000 | Sorghum | cytosol | 34.24 | 27.61 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 33.05 | 27.48 |
| Zm00001d003948_P001 | Maize | cytosol | 34.41 | 27.45 |
| EES10633 | Sorghum | cytosol | 34.07 | 27.21 |
| CDY49460 | Canola | nucleus | 30.15 | 27.15 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 26.75 | 27.07 |
| Zm00001d025238_P001 | Maize | cytosol | 33.56 | 26.84 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 33.05 | 26.15 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 33.05 | 26.15 |
| Zm00001d050565_P001 | Maize | cytosol | 28.62 | 26.09 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 32.88 | 25.87 |
| GSMUA_Achr10P... | Banana | cytosol | 26.75 | 25.61 |
| EES10933 | Sorghum | cytosol | 31.52 | 25.55 |
| Zm00001d025584_P001 | Maize | cytosol | 31.86 | 25.51 |
| Os03t0401200-01 | Rice | cytosol | 32.37 | 25.4 |
| CDY19683 | Canola | cytosol | 29.98 | 25.4 |
| Zm00001d025585_P001 | Maize | cytosol | 31.69 | 25.38 |
| EES07899 | Sorghum | cytosol | 31.52 | 25.17 |
| CDY11521 | Canola | nucleus | 25.21 | 25.0 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 32.37 | 24.97 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 32.03 | 24.7 |
| CDX76752 | Canola | nucleus | 25.72 | 24.39 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 6.98 | 23.56 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 28.96 | 23.42 |
| CDX88917 | Canola | nucleus | 13.12 | 23.19 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 27.6 | 22.75 |
| Os01t0923800-01 | Rice | nucleus | 28.79 | 22.72 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 28.96 | 21.49 |
| CDY27107 | Canola | nucleus | 13.12 | 21.04 |
| Zm00001d011997_P001 | Maize | nucleus | 29.3 | 20.92 |
| CDX92586 | Canola | nucleus | 12.44 | 20.86 |
| CDY40464 | Canola | nucleus | 17.04 | 20.83 |
| CDY32121 | Canola | nucleus | 16.35 | 20.65 |
| KXG34016 | Sorghum | nucleus | 28.79 | 20.39 |
| CDY08056 | Canola | nucleus | 21.81 | 20.38 |
| CDY24701 | Canola | nucleus | 20.27 | 20.2 |
| CDY51818 | Canola | nucleus | 13.63 | 20.2 |
| CDY12382 | Canola | nucleus | 12.44 | 19.95 |
| CDX76475 | Canola | cytosol | 6.98 | 19.9 |
| CDX76474 | Canola | cytosol | 8.01 | 19.58 |
| CDY05255 | Canola | nucleus | 21.47 | 19.03 |
| CDY60890 | Canola | cytosol | 7.84 | 19.01 |
| CDY12569 | Canola | cytosol | 11.41 | 18.72 |
| CDX92856 | Canola | nucleus | 14.14 | 17.66 |
| CDX99362 | Canola | nucleus | 8.52 | 17.54 |
| CDX86172 | Canola | nucleus | 18.4 | 17.17 |
| CDY41935 | Canola | cytosol | 15.5 | 17.11 |
| CDY29872 | Canola | cytosol | 12.78 | 16.82 |
| CDY27796 | Canola | cytosol | 14.99 | 16.64 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 6.13 | 16.36 |
| CDX78942 | Canola | cytosol | 8.52 | 16.34 |
| CDX76473 | Canola | cytosol | 6.64 | 16.12 |
| CDX80667 | Canola | nucleus | 18.23 | 16.09 |
| CDX74107 | Canola | cytosol | 7.33 | 16.04 |
| CDY27811 | Canola | nucleus | 12.95 | 15.87 |
| CDY09330 | Canola | cytosol | 5.96 | 15.56 |
| CDX70837 | Canola | mitochondrion | 12.95 | 15.08 |
| CDY13919 | Canola | nucleus | 12.1 | 15.04 |
| CDX99360 | Canola | cytosol | 8.35 | 14.71 |
| CDY13918 | Canola | nucleus | 14.31 | 14.66 |
| CDX88918 | Canola | cytosol | 13.12 | 14.47 |
| CDX70843 | Canola | extracellular, golgi | 12.78 | 13.86 |
| CDY60893 | Canola | cytosol | 3.75 | 13.84 |
| CDY60894 | Canola | cytosol | 3.75 | 13.84 |
| CDX70840 | Canola | nucleus | 13.63 | 13.7 |
| CDX88920 | Canola | nucleus | 13.63 | 13.61 |
| CDX99992 | Canola | cytosol | 21.64 | 13.5 |
| CDY34931 | Canola | cytosol | 5.11 | 13.33 |
| CDY19714 | Canola | nucleus | 21.81 | 13.31 |
| CDX92582 | Canola | nucleus | 19.08 | 13.3 |
| CDX74082 | Canola | cytosol | 4.94 | 12.83 |
| CDX76476 | Canola | cytosol | 2.21 | 12.75 |
| CDX78941 | Canola | nucleus | 11.58 | 12.32 |
| CDX88924 | Canola | plastid | 14.82 | 12.31 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 8.35 | 11.75 |
| CDY27809 | Canola | nucleus | 19.42 | 11.49 |
| CDX99361 | Canola | cytosol | 2.73 | 10.96 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 14.14 | 9.72 |
| CDY41919 | Canola | nucleus, plastid | 19.59 | 9.66 |
| CDY41917 | Canola | nucleus | 14.82 | 9.1 |
| CDY08035 | Canola | cytosol | 1.19 | 7.07 |
| CDX70841 | Canola | nucleus | 15.16 | 6.15 |
| CDX88919 | Canola | cytosol | 15.67 | 5.82 |
| CDX92583 | Canola | mitochondrion, plastid | 3.41 | 5.76 |
| CDY31307 | Canola | cytosol | 0.34 | 2.17 |
| CDX92584 | Canola | mitochondrion | 0.68 | 1.15 |
Protein Annotations
| EnsemblPlants:CDX74632 | EnsemblPlantsGene:GSBRNA2T00114617001 | InterPro:DUF3444 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF2 | PFAM:PF11926 |
| ProteinID:CDX74632 | ProteinID:CDX74632.1 | SEG:seg | UniParc:UPI0004EEE95B | MapMan:35.2 | : |
Description
BnaA04g07570D
Coordinates
chrLK031801:+:2290963..2293243
Molecular Weight (calculated)
66090.8 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.580
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAYREEALK AKQFAERRFA EKDFTGARSY ALRARSLFPD LEGLSQMLTT YDSRHSTRRW LYCFIPTRTN ASELVGLSRS YPKLGPFSQM ISERLDTFWT
101: VCTSCKVQYE YLRKYVNKRL SCKNCRGAFI AVETGPGPVS ASVQYAPPSH TTSNGYGSHG YDFVSGMPTN STYFLGQYPA HGYEYDWNSY VGTSPGSLES
201: NRMSSVSSGY PSKLANGVVC RGRKNAPRPE KKRNVSLGSS GNGFVENTES KTTKLDGNKE PESKHLGQSH GKSRRWSAPA TGLDTRKLLI SKAKTHIQQR
301: LEMMRLASVA AEAMATEDAA PLDEVKASSK VGDGVFGIGR HVSSGHQSVR KINGPITVPD SDFHDFDSNR SEGCFEARQI WAIYDEDDGM PRLYCVVREV
401: LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVEHVN IFSHLLKDKK TGRGGCVRIF PKTGEIWAVY KNWSPDWNNS TPDEVRHQYE
501: MVEILDEYSE QFGVCIASLV KVEGYKTVYC RREESTKWIP RKEMLRFSHQ VPSWFLKEET SSVPGNCWDL DPAAIPEELL GTGAGTD
101: VCTSCKVQYE YLRKYVNKRL SCKNCRGAFI AVETGPGPVS ASVQYAPPSH TTSNGYGSHG YDFVSGMPTN STYFLGQYPA HGYEYDWNSY VGTSPGSLES
201: NRMSSVSSGY PSKLANGVVC RGRKNAPRPE KKRNVSLGSS GNGFVENTES KTTKLDGNKE PESKHLGQSH GKSRRWSAPA TGLDTRKLLI SKAKTHIQQR
301: LEMMRLASVA AEAMATEDAA PLDEVKASSK VGDGVFGIGR HVSSGHQSVR KINGPITVPD SDFHDFDSNR SEGCFEARQI WAIYDEDDGM PRLYCVVREV
401: LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVEHVN IFSHLLKDKK TGRGGCVRIF PKTGEIWAVY KNWSPDWNNS TPDEVRHQYE
501: MVEILDEYSE QFGVCIASLV KVEGYKTVYC RREESTKWIP RKEMLRFSHQ VPSWFLKEET SSVPGNCWDL DPAAIPEELL GTGAGTD
001: MPTNSTYFLG QYPAHGYEYV TNESYDWSSY VGTSPGNLES NRMSSASNGY PYKLNNGVVL IKASRPEKKR NVGLGSSGNG FVENITKSNP ESKATNLDAK
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
101: MEHDFKHPGK SYGLMRRWSS TTGLDTRKIL IHKAKTDIKQ RLEIMRLASE AAATATEDAT PLDEVSASSK VGDDVSRLGK NVSFGHPPVR KINGPITVPD
201: SDFHDFDKNR LEECFEARQI WAIYDEDDGM PRLYCMVREV LSVQPFKIDI AYLSSKTDIE FGTMKWVQYG FTKSCGHFRI RNTDIVDHVN IFSHLLKGKK
301: TGRGGCVRIF PQTGDIWTVY KNWSPNWNNS TPDEVRHQYK MVEILDEYSE QFGVCIAPLV KVDGYKTVYC RRDKEESKKW IPRREMLRFS HQVPSRFLKE
401: ETCGVPGNCW DLDPSAIPEE LLHNGAGTD
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G35753]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.