Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005331.1-P | Field mustard | nucleus | 90.4 | 68.19 |
| CDY32121 | Canola | nucleus | 64.9 | 55.27 |
| CDY40464 | Canola | nucleus | 66.16 | 54.58 |
| AT2G35540.1 | Thale cress | nucleus | 76.26 | 51.19 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 34.09 | 26.89 |
| KRH74334 | Soybean | cytosol, nucleus | 37.37 | 26.38 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 38.89 | 26.06 |
| KRH39596 | Soybean | nucleus | 37.63 | 25.73 |
| Zm00001d045553_P001 | Maize | cytosol | 29.29 | 24.37 |
| Os06t0111700-01 | Rice | nucleus | 29.04 | 24.06 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 27.02 | 23.94 |
| TraesCS7A01G033400.1 | Wheat | plastid | 27.02 | 23.73 |
| TraesCS4A01G456000.1 | Wheat | plastid | 26.77 | 23.5 |
| EES11310 | Sorghum | cytosol, plastid | 28.79 | 23.17 |
| KXG19130 | Sorghum | cytosol | 28.28 | 22.13 |
| CDX74108 | Canola | cytosol | 10.35 | 20.3 |
| CDX88917 | Canola | nucleus | 15.91 | 18.98 |
| PGSC0003DMT400047612 | Potato | nucleus | 37.37 | 16.14 |
| Solyc08g005300.1.1 | Tomato | nucleus | 36.62 | 15.9 |
| CDX92586 | Canola | nucleus | 12.12 | 13.71 |
| CDY47298 | Canola | cytosol | 20.2 | 13.7 |
| CDX74632 | Canola | cytosol | 20.2 | 13.63 |
| CDY27811 | Canola | nucleus | 15.91 | 13.15 |
| CDY27796 | Canola | cytosol | 17.17 | 12.85 |
| CDX86172 | Canola | nucleus | 20.2 | 12.72 |
| CDX76994 | Canola | nucleus | 18.69 | 12.71 |
| CDX70837 | Canola | mitochondrion | 16.16 | 12.7 |
| CDY41935 | Canola | cytosol | 16.92 | 12.59 |
| CDY29872 | Canola | cytosol | 14.14 | 12.56 |
| CDY49460 | Canola | nucleus | 20.2 | 12.27 |
| CDX80667 | Canola | nucleus | 20.45 | 12.18 |
| CDY35353 | Canola | cytosol | 18.94 | 12.04 |
| CDY19683 | Canola | cytosol | 20.71 | 11.83 |
| CDX76752 | Canola | nucleus | 18.43 | 11.79 |
| CDX88918 | Canola | cytosol | 15.4 | 11.47 |
| CDY08056 | Canola | nucleus | 18.18 | 11.46 |
| CDY15046 | Canola | nucleus | 19.7 | 11.3 |
| CDX70843 | Canola | extracellular, golgi | 15.4 | 11.28 |
| CDX93081 | Canola | nucleus | 19.7 | 11.26 |
| CDX92856 | Canola | nucleus | 13.13 | 11.06 |
| CDY11521 | Canola | nucleus | 16.41 | 10.98 |
| CDY24701 | Canola | nucleus | 16.16 | 10.87 |
| CDY13918 | Canola | nucleus | 15.4 | 10.65 |
| CDY05255 | Canola | nucleus | 17.42 | 10.42 |
| CDX70840 | Canola | nucleus | 14.65 | 9.93 |
| CDX88920 | Canola | nucleus | 14.65 | 9.86 |
| CDY13919 | Canola | nucleus | 11.62 | 9.75 |
| CDX92582 | Canola | nucleus | 20.45 | 9.62 |
| CDX88924 | Canola | plastid | 15.66 | 8.77 |
| CDY19714 | Canola | nucleus | 20.96 | 8.63 |
| CDX99992 | Canola | cytosol | 19.95 | 8.4 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 8.84 | 8.39 |
| CDY60893 | Canola | cytosol | 3.28 | 8.18 |
| CDY60894 | Canola | cytosol | 3.28 | 8.18 |
| CDY41917 | Canola | nucleus | 18.69 | 7.74 |
| CDY27809 | Canola | nucleus | 18.69 | 7.46 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 15.91 | 7.38 |
| CDY41919 | Canola | nucleus, plastid | 18.94 | 6.3 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.28 | 5.91 |
| CDY27107 | Canola | nucleus | 4.8 | 5.19 |
| CDY12382 | Canola | nucleus | 4.55 | 4.92 |
| CDY12569 | Canola | cytosol | 4.29 | 4.75 |
| CDX70841 | Canola | nucleus | 17.17 | 4.7 |
| CDY34931 | Canola | cytosol | 2.53 | 4.44 |
| CDX74082 | Canola | cytosol | 2.53 | 4.42 |
| CDX92583 | Canola | mitochondrion, plastid | 3.79 | 4.32 |
| CDX99362 | Canola | nucleus | 3.03 | 4.21 |
| CDX88919 | Canola | cytosol | 16.67 | 4.17 |
| CDX78941 | Canola | nucleus | 4.8 | 3.44 |
| CDX76474 | Canola | cytosol | 2.02 | 3.33 |
| CDX78942 | Canola | cytosol | 2.27 | 2.94 |
| CDY60890 | Canola | cytosol | 1.77 | 2.89 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.26 | 2.87 |
| CDX99360 | Canola | cytosol | 2.27 | 2.7 |
| CDX74107 | Canola | cytosol | 1.77 | 2.61 |
| CDX76475 | Canola | cytosol | 1.26 | 2.43 |
| CDY09330 | Canola | cytosol | 1.01 | 1.78 |
| CDX76473 | Canola | cytosol | 1.01 | 1.65 |
| CDX99361 | Canola | cytosol | 0.51 | 1.37 |
| CDY31307 | Canola | cytosol | 0.25 | 1.09 |
| CDY08035 | Canola | cytosol | 0.25 | 1.01 |
| CDX92584 | Canola | mitochondrion | 0.51 | 0.57 |
| CDX76476 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY51818 | EnsemblPlantsGene:GSBRNA2T00004292001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF26 |
| PFAM:PF11926 | ProteinID:CDY51818 | ProteinID:CDY51818.1 | SEG:seg | UniParc:UPI0004EE86D0 | UniProt:A0A078IRU6 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC04g53740DBnaC04g53740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRU6]
Coordinates
chrLK033031:-:36919..38109
Molecular Weight (calculated)
45682.4 Da
IEP (calculated)
8.663
GRAVY (calculated)
-0.735
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLRIRIQGE FGACDGETST FSNGACSSKI ITYTRRKKRV GEGGESLRRV SEAGEMREEE AEALNAPERL DEEMMTLAEM QSVLKRKKPK VKITERSSTR
101: VSREEHDISS GDETLMEMST NKEKEALKNK SNKKKNKKTN RKELSEVVDL EYVPGVNRKR DRGKLNQENY MADEDCEMYN FDKDRMPRSF KKGQVWAVYD
201: GGDDDRMPRS YCLVSEVVSL NPFKVWITWL DFESEKLISW VKISSCGRFR VSEKALVEQV KLFSHVVNCE RVAREVYQIY PRKGSVWAVH SETSPGLQRR
301: KTRRYEIVVC LTMYSDAYGL SVAYLEKVNE ECSNLFKRRD YGYKAVRWVE KDDVAALLSH QIPSEKLPED QSRAGLRESW VLDLASVPPD LVAATL
101: VSREEHDISS GDETLMEMST NKEKEALKNK SNKKKNKKTN RKELSEVVDL EYVPGVNRKR DRGKLNQENY MADEDCEMYN FDKDRMPRSF KKGQVWAVYD
201: GGDDDRMPRS YCLVSEVVSL NPFKVWITWL DFESEKLISW VKISSCGRFR VSEKALVEQV KLFSHVVNCE RVAREVYQIY PRKGSVWAVH SETSPGLQRR
301: KTRRYEIVVC LTMYSDAYGL SVAYLEKVNE ECSNLFKRRD YGYKAVRWVE KDDVAALLSH QIPSEKLPED QSRAGLRESW VLDLASVPPD LVAATL
001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.