Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G456000.1 | Wheat | plastid | 93.79 | 93.79 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 88.91 | 89.71 |
| Os06t0111700-01 | Rice | nucleus | 68.96 | 65.06 |
| Zm00001d045553_P001 | Maize | cytosol | 61.86 | 58.61 |
| EES11310 | Sorghum | cytosol, plastid | 63.41 | 58.13 |
| KXG19130 | Sorghum | cytosol | 57.87 | 51.58 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 47.01 | 42.23 |
| KRH74334 | Soybean | cytosol, nucleus | 40.13 | 32.26 |
| KRH39596 | Soybean | nucleus | 39.69 | 30.92 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 40.13 | 30.63 |
| CDY32121 | Canola | nucleus | 28.82 | 27.96 |
| Bra017315.1-P | Field mustard | nucleus | 28.6 | 27.04 |
| CDY51818 | Canola | nucleus | 23.73 | 27.02 |
| CDY40464 | Canola | nucleus | 28.6 | 26.88 |
| Bra005331.1-P | Field mustard | nucleus | 29.49 | 25.33 |
| AT2G35540.1 | Thale cress | nucleus | 33.04 | 25.25 |
| PGSC0003DMT400047612 | Potato | nucleus | 38.36 | 18.87 |
| Solyc08g005300.1.1 | Tomato | nucleus | 38.14 | 18.86 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 28.6 | 17.6 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 27.27 | 16.58 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 29.05 | 16.56 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 27.05 | 16.03 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 7.1 | 11.76 |
| TraesCS3A01G441600.4 | Wheat | cytosol | 18.4 | 11.02 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 23.06 | 10.66 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 23.28 | 10.15 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 22.39 | 9.87 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 17.29 | 9.69 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 14.19 | 9.55 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 24.61 | 9.33 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 17.74 | 8.71 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G033400.1 | EnsemblPlantsGene:TraesCS7A01G033400 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF26 |
| PFAM:PF11926 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:14620922..14622277
Molecular Weight (calculated)
49360.0 Da
IEP (calculated)
7.073
GRAVY (calculated)
-0.498
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGDASSPTS TAAAALAQAE ADLSAGRLRA AQRQARRAAR LDPGSAVASV LLAATSVLLA DAGSPRATLL LPEDPKSSLA SDPDAIRRHY KSLSRSLRPG
101: DGACSYPAAA AAAQEALRRA ADAYAALKEE REAPPPPPTF WTACAGCRLL HEFDRQYVGF RLTCPSCRRS FLAAEVPPPP PPKKHKPEKT LAEMQLQLAK
201: RKGKDQRAAQ SSSSDDSDEQ SELEVPEEEP DSYHSGQMAV EDSDFYNFDA DRMEKCFKRG QVWALYGDDD GMPRHYALVE TALPGRQFRA QIRWLEHQPD
301: GKEGKPCGAF KVGREVTVHS VNVFSHLVAC EKVAREAYRV YPKKGSVWAL YAGEYIDTGR PKYDFVVFLS GYSEVHGISF GYLEKVEGFR SIFTRREIGV
401: RAVQYLREGD VGLLSHQTPA RKVSKGEAST LPPGDCWELD PASLPAELLH A
101: DGACSYPAAA AAAQEALRRA ADAYAALKEE REAPPPPPTF WTACAGCRLL HEFDRQYVGF RLTCPSCRRS FLAAEVPPPP PPKKHKPEKT LAEMQLQLAK
201: RKGKDQRAAQ SSSSDDSDEQ SELEVPEEEP DSYHSGQMAV EDSDFYNFDA DRMEKCFKRG QVWALYGDDD GMPRHYALVE TALPGRQFRA QIRWLEHQPD
301: GKEGKPCGAF KVGREVTVHS VNVFSHLVAC EKVAREAYRV YPKKGSVWAL YAGEYIDTGR PKYDFVVFLS GYSEVHGISF GYLEKVEGFR SIFTRREIGV
401: RAVQYLREGD VGLLSHQTPA RKVSKGEAST LPPGDCWELD PASLPAELLH A
001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.