Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51818 | Canola | nucleus | 51.19 | 76.26 |
| Bra005331.1-P | Field mustard | nucleus | 66.95 | 75.24 |
| CDY32121 | Canola | nucleus | 58.81 | 74.62 |
| Bra017315.1-P | Field mustard | nucleus | 60.0 | 74.21 |
| CDY40464 | Canola | nucleus | 60.34 | 74.17 |
| VIT_02s0012g02290.t01 | Wine grape | nucleus | 44.07 | 43.99 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 34.58 | 40.64 |
| KRH74334 | Soybean | cytosol, nucleus | 37.97 | 39.93 |
| KRH39596 | Soybean | nucleus | 38.64 | 39.38 |
| Zm00001d045553_P001 | Maize | cytosol | 27.29 | 33.82 |
| TraesCS7A01G033400.1 | Wheat | plastid | 25.25 | 33.04 |
| EES11310 | Sorghum | cytosol, plastid | 27.12 | 32.52 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 24.41 | 32.21 |
| TraesCS4A01G456000.1 | Wheat | plastid | 24.58 | 32.15 |
| Os06t0111700-01 | Rice | nucleus | 25.93 | 32.01 |
| KXG19130 | Sorghum | cytosol | 25.76 | 30.04 |
| PGSC0003DMT400047612 | Potato | nucleus | 42.37 | 27.26 |
| Solyc08g005300.1.1 | Tomato | nucleus | 41.69 | 26.97 |
| AT5G37750.1 | Thale cress | cytosol | 9.83 | 24.07 |
| AT2G25560.1 | Thale cress | cytosol | 23.73 | 21.34 |
| AT5G37440.1 | Thale cress | cytosol | 10.17 | 20.91 |
| AT5G50115.1 | Thale cress | cytosol | 17.12 | 20.82 |
| AT5G37760.1 | Thale cress | cytosol | 7.29 | 20.77 |
| AT2G05230.1 | Thale cress | cytosol | 24.58 | 20.54 |
| AT2G05250.1 | Thale cress | cytosol | 24.58 | 20.54 |
| AT5G53150.3 | Thale cress | cytosol | 26.1 | 20.4 |
| AT3G06340.4 | Thale cress | cytosol | 21.86 | 19.17 |
| AT4G19580.1 | Thale cress | cytosol | 9.83 | 18.59 |
| AT5G35753.1 | Thale cress | cytosol | 13.39 | 18.41 |
| AT5G37380.6 | Thale cress | nucleus | 13.22 | 18.1 |
| AT3G06778.1 | Thale cress | cytosol | 6.95 | 17.9 |
| AT4G19590.2 | Thale cress | nucleus | 11.19 | 17.65 |
| AT3G05110.1 | Thale cress | nucleus | 11.02 | 17.47 |
| AT5G62780.1 | Thale cress | cytosol | 6.1 | 17.39 |
| AT5G18740.1 | Thale cress | nucleus | 12.54 | 17.21 |
| AT4G19570.1 | Thale cress | nucleus | 14.24 | 15.05 |
| AT5G18750.1 | Thale cress | nucleus | 21.86 | 14.59 |
| AT3G04960.3 | Thale cress | cytosol | 14.92 | 14.55 |
| AT5G27240.1 | Thale cress | nucleus | 23.9 | 12.77 |
| AT4G27980.2 | Thale cress | cytosol | 12.71 | 12.44 |
| AT3G04980.2 | Thale cress | nucleus | 24.41 | 12.17 |
| AT5G18730.1 | Thale cress | cytosol | 10.85 | 12.12 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 2.54 | 4.39 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:818119 | UniProt:A0A178VZD5 | ProteinID:AEC09119.1 | ArrayExpress:AT2G35540 |
| EnsemblPlantsGene:AT2G35540 | RefSeq:AT2G35540 | TAIR:AT2G35540 | RefSeq:AT2G35540-TAIR-G | EnsemblPlants:AT2G35540.1 | TAIR:AT2G35540.1 |
| InterPro:DUF3444 | InterPro:DnaJ_domain | UniProt:F4IKR5 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| RefSeq:NP_181097.2 | ProteinID:OAP11659.1 | PFAM:PF00226 | PFAM:PF11926 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PRINTS:PR00625 |
| PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0001E92C87 | SEG:seg |
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
Coordinates
chr2:+:14927071..14929134
Molecular Weight (calculated)
67094.7 Da
IEP (calculated)
6.529
GRAVY (calculated)
-0.615
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.