Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001194.1-P | Field mustard | cytosol | 20.36 | 67.82 |
| CDX74108 | Canola | cytosol | 20.06 | 66.83 |
| CDY08056 | Canola | nucleus | 62.11 | 66.56 |
| CDY24701 | Canola | nucleus | 55.72 | 63.67 |
| Bra020757.1-P | Field mustard | nucleus | 58.1 | 59.88 |
| CDY05255 | Canola | nucleus | 57.21 | 58.16 |
| AT5G18750.1 | Thale cress | nucleus | 47.25 | 35.97 |
| AT5G18740.1 | Thale cress | nucleus | 19.32 | 30.23 |
| KRH50936 | Soybean | nucleus | 41.31 | 29.02 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 35.66 | 28.74 |
| KRH11282 | Soybean | nucleus | 39.38 | 27.38 |
| KRH21004 | Soybean | nucleus | 39.23 | 27.27 |
| AT5G37750.1 | Thale cress | cytosol | 9.51 | 26.56 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 40.42 | 26.05 |
| AT4G19590.2 | Thale cress | nucleus | 13.82 | 24.87 |
| PGSC0003DMT400058792 | Potato | nucleus | 33.43 | 24.54 |
| AT2G25560.1 | Thale cress | cytosol | 23.63 | 24.24 |
| AT3G06778.1 | Thale cress | cytosol | 8.17 | 24.02 |
| AT3G05110.1 | Thale cress | nucleus | 13.22 | 23.92 |
| AT5G37440.1 | Thale cress | cytosol | 9.96 | 23.34 |
| AT2G05250.1 | Thale cress | cytosol | 24.22 | 23.09 |
| AT2G05230.1 | Thale cress | cytosol | 24.22 | 23.09 |
| Solyc01g067780.1.1 | Tomato | cytosol | 30.61 | 22.81 |
| AT5G62780.1 | Thale cress | cytosol | 6.98 | 22.71 |
| AT4G19580.1 | Thale cress | cytosol | 10.25 | 22.12 |
| AT2G35540.1 | Thale cress | nucleus | 19.17 | 21.86 |
| AT5G53150.3 | Thale cress | cytosol | 24.52 | 21.85 |
| AT5G18730.1 | Thale cress | cytosol | 17.09 | 21.78 |
| AT5G37760.1 | Thale cress | cytosol | 6.69 | 21.74 |
| PGSC0003DMT400086601 | Potato | cytosol | 6.39 | 21.39 |
| AT5G50115.1 | Thale cress | cytosol | 15.3 | 21.24 |
| AT5G35753.1 | Thale cress | cytosol | 13.22 | 20.75 |
| AT5G37380.6 | Thale cress | nucleus | 12.63 | 19.72 |
| AT3G04960.3 | Thale cress | cytosol | 17.53 | 19.5 |
| AT4G19570.1 | Thale cress | nucleus | 15.3 | 18.46 |
| AT5G27240.1 | Thale cress | nucleus | 28.97 | 17.66 |
| AT3G04980.2 | Thale cress | nucleus | 27.04 | 15.38 |
| AT4G27980.2 | Thale cress | cytosol | 13.52 | 15.09 |
| PGSC0003DMT400058788 | Potato | nucleus | 10.55 | 14.52 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 4.01 | 7.89 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 2.53 | 6.23 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:819808 | ProteinID:AAF08586.1 | ProteinID:AEE74378.1 | ProteinID:AEE74379.1 |
| ProteinID:AEE74380.1 | ProteinID:ANM64093.1 | ArrayExpress:AT3G06340 | EnsemblPlantsGene:AT3G06340 | RefSeq:AT3G06340 | TAIR:AT3G06340 |
| RefSeq:AT3G06340-TAIR-G | EnsemblPlants:AT3G06340.4 | Unigene:At.43185 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_001030649.1 | RefSeq:NP_001189825.1 | RefSeq:NP_001326143.1 | RefSeq:NP_187285.1 |
| PFAM:PF00226 | PFAM:PF11926 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR45089 | UniProt:Q9SQT7 |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000009DBA9 | SEG:seg | : | : |
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9SQT7]
Coordinates
chr3:-:1920161..1923417
Molecular Weight (calculated)
75923.4 Da
IEP (calculated)
5.708
GRAVY (calculated)
-0.804
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINRDEALR AKDLAEGLMK KTDFTAARKL AMKAQKMDSS LENISRMIMV CDVHCAATEK LFGTEMDWYG ILQVEQIAND VIIKKQYKRL ALLLHPDKNK
101: LPGAESAFKL IGEAQRILLD REKRTLHDNK RKTWRKPAAP PYKAQQMPNY HTQPHFRASV NTRNIFTELR PEIRHPFQKA QAQPAAFTHL KTFGTSCVFC
201: RVRYEYDRAH VNKEVTCETC KKRFTAFEEP LQSAPQAKGP SQTTYCFPQQ SKFPDQRACS EPHKRPENPP TVSSSKASFP MPGSTAKHNG KRKRKNVAEC
301: SESSDSESSS ESEDDVNNDT TAAQDSGSNG GEQPRRSVRS KQKVSYNENL SDDDVDLVND NGEGSGKNID TEREKETEEE KQTNENHSST ESIDMNGKIE
401: VDQVETPSGA SDSEEDLSSG SAEKPNLINY DDPDFNDFDK LREKSCFQAG QIWAVYDEEE GMPRFYALIK KVTTPDFMLR YVWFEVDQDQ ENETPNLPVS
501: VGKFVVGNIE ETNLCSIFSH FVYSTTKIRT RKFTVFPKKG EIWALFKNWD INCSADSVSP MKYEYEFVEI LSDHAEGATV SVGFLSKVQG FNCVFCPMPK
601: DESNTCEIPP HEFCRFSHSI PSFRLTGTEG RGITKGWYEL DPAALPASVS QNLSGEEAAQ DRDRQSPPSG SAS
101: LPGAESAFKL IGEAQRILLD REKRTLHDNK RKTWRKPAAP PYKAQQMPNY HTQPHFRASV NTRNIFTELR PEIRHPFQKA QAQPAAFTHL KTFGTSCVFC
201: RVRYEYDRAH VNKEVTCETC KKRFTAFEEP LQSAPQAKGP SQTTYCFPQQ SKFPDQRACS EPHKRPENPP TVSSSKASFP MPGSTAKHNG KRKRKNVAEC
301: SESSDSESSS ESEDDVNNDT TAAQDSGSNG GEQPRRSVRS KQKVSYNENL SDDDVDLVND NGEGSGKNID TEREKETEEE KQTNENHSST ESIDMNGKIE
401: VDQVETPSGA SDSEEDLSSG SAEKPNLINY DDPDFNDFDK LREKSCFQAG QIWAVYDEEE GMPRFYALIK KVTTPDFMLR YVWFEVDQDQ ENETPNLPVS
501: VGKFVVGNIE ETNLCSIFSH FVYSTTKIRT RKFTVFPKKG EIWALFKNWD INCSADSVSP MKYEYEFVEI LSDHAEGATV SVGFLSKVQG FNCVFCPMPK
601: DESNTCEIPP HEFCRFSHSI PSFRLTGTEG RGITKGWYEL DPAALPASVS QNLSGEEAAQ DRDRQSPPSG SAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.