Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034258.1-P | Field mustard | cytosol | 69.36 | 73.51 |
| CDY35353 | Canola | cytosol | 69.21 | 72.87 |
| CDX76994 | Canola | nucleus | 63.72 | 71.82 |
| CDX76752 | Canola | nucleus | 53.05 | 56.22 |
| Bra007790.1-P | Field mustard | nucleus | 50.46 | 55.91 |
| CDY11521 | Canola | nucleus | 50.46 | 55.91 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 37.2 | 40.53 |
| GSMUA_Achr11P... | Banana | cytosol | 26.68 | 34.86 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 28.51 | 34.76 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 27.59 | 34.61 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 38.41 | 34.38 |
| GSMUA_Achr10P... | Banana | cytosol | 32.01 | 34.26 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 38.26 | 34.24 |
| EES10633 | Sorghum | cytosol | 38.11 | 34.01 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 36.28 | 33.71 |
| Os02t0510000-01 | Rice | cytosol | 37.65 | 33.65 |
| Zm00001d003948_P001 | Maize | cytosol | 37.35 | 33.29 |
| Zm00001d025238_P001 | Maize | cytosol | 37.2 | 33.24 |
| AT5G37750.1 | Thale cress | cytosol | 12.2 | 33.2 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 29.27 | 33.1 |
| OQU85000 | Sorghum | cytosol | 36.59 | 32.97 |
| Zm00001d050565_P001 | Maize | cytosol | 30.95 | 31.52 |
| Os03t0401200-01 | Rice | cytosol | 35.52 | 31.15 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 35.06 | 31.0 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 20.73 | 30.91 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 34.91 | 30.86 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 35.06 | 30.83 |
| EES10933 | Sorghum | cytosol | 33.69 | 30.52 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 35.37 | 30.49 |
| Zm00001d025584_P001 | Maize | cytosol | 33.99 | 30.42 |
| EES07899 | Sorghum | cytosol | 33.99 | 30.34 |
| Zm00001d025585_P001 | Maize | cytosol | 33.69 | 30.15 |
| AT2G05250.1 | Thale cress | cytosol | 32.16 | 29.89 |
| AT2G05230.1 | Thale cress | cytosol | 32.16 | 29.89 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 34.45 | 29.7 |
| AT5G50115.1 | Thale cress | cytosol | 21.65 | 29.28 |
| AT5G37440.1 | Thale cress | cytosol | 12.8 | 29.27 |
| AT5G37380.6 | Thale cress | nucleus | 19.21 | 29.23 |
| Os04t0388800-01 | Rice | nucleus | 26.52 | 29.1 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 31.25 | 28.24 |
| AT5G53150.3 | Thale cress | cytosol | 32.47 | 28.21 |
| Os01t0923800-01 | Rice | nucleus | 31.86 | 28.09 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 30.18 | 27.81 |
| AT4G19590.2 | Thale cress | nucleus | 15.55 | 27.27 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 32.77 | 27.18 |
| AT5G35753.1 | Thale cress | cytosol | 17.68 | 27.04 |
| AT4G19580.1 | Thale cress | cytosol | 12.04 | 25.32 |
| AT5G37760.1 | Thale cress | cytosol | 7.93 | 25.12 |
| KXG34016 | Sorghum | nucleus | 31.4 | 24.85 |
| Zm00001d011997_P001 | Maize | nucleus | 30.34 | 24.21 |
| AT2G35540.1 | Thale cress | nucleus | 21.34 | 23.73 |
| AT3G06340.4 | Thale cress | cytosol | 24.24 | 23.63 |
| AT5G62780.1 | Thale cress | cytosol | 6.86 | 21.74 |
| AT5G18740.1 | Thale cress | nucleus | 13.72 | 20.93 |
| AT4G19570.1 | Thale cress | nucleus | 17.23 | 20.25 |
| AT3G05110.1 | Thale cress | nucleus | 11.13 | 19.62 |
| AT3G06778.1 | Thale cress | cytosol | 6.71 | 19.21 |
| AT5G18750.1 | Thale cress | nucleus | 23.17 | 17.19 |
| AT3G04960.3 | Thale cress | cytosol | 15.24 | 16.53 |
| AT5G27240.1 | Thale cress | nucleus | 25.3 | 15.04 |
| AT3G04980.2 | Thale cress | nucleus | 26.22 | 14.54 |
| AT4G27980.2 | Thale cress | cytosol | 13.11 | 14.26 |
| AT5G18730.1 | Thale cress | cytosol | 11.13 | 13.83 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 2.9 | 5.56 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:817094 | ProteinID:AAM15231.1 | ProteinID:AEC07715.1 | EMBL:AF367256 |
| ArrayExpress:AT2G25560 | EnsemblPlantsGene:AT2G25560 | RefSeq:AT2G25560 | TAIR:AT2G25560 | RefSeq:AT2G25560-TAIR-G | EnsemblPlants:AT2G25560.1 |
| TAIR:AT2G25560.1 | EMBL:AY072085 | EMBL:AY096664 | EMBL:AY143943 | Unigene:At.13419 | InterPro:DUF3444 |
| InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_180126.1 | PFAM:PF00226 |
| PFAM:PF11926 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00625 |
| PFscan:PS50076 | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 | UniProt:Q9SLA7 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI00000AC2A4 | SEG:seg | : | : | : | : |
Description
At2g25560/F13B15.22 [Source:UniProtKB/TrEMBL;Acc:Q9SLA7]
Coordinates
chr2:+:10880552..10883939
Molecular Weight (calculated)
73101.2 Da
IEP (calculated)
9.357
GRAVY (calculated)
-0.561
Length
656 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR
201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE
301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV
401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP
501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD
601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.