Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057888 | Potato | cytosol | 17.74 | 33.33 |
| AT3G04960.3 | Thale cress | cytosol | 51.34 | 31.57 |
| PGSC0003DMT400089411 | Potato | cytosol | 16.67 | 27.68 |
| AT4G27980.2 | Thale cress | cytosol | 42.2 | 26.04 |
| AT5G18740.1 | Thale cress | nucleus | 21.77 | 18.84 |
| PGSC0003DMT400057894 | Potato | cytosol | 19.09 | 18.3 |
| Solyc10g007630.1.1 | Tomato | cytosol | 23.12 | 17.7 |
| PGSC0003DMT400054841 | Potato | cytosol | 23.39 | 17.61 |
| PGSC0003DMT400057893 | Potato | cytosol | 22.31 | 17.15 |
| AT5G18730.1 | Thale cress | cytosol | 22.58 | 15.91 |
| AT5G35753.1 | Thale cress | cytosol | 18.01 | 15.62 |
| Solyc01g098310.1.1 | Tomato | cytosol | 18.28 | 14.91 |
| Solyc01g098330.1.1 | Tomato | nucleus | 16.13 | 14.63 |
| KRG92798 | Soybean | cytosol | 25.81 | 13.54 |
| Solyc08g029220.1.1 | Tomato | nucleus | 28.23 | 13.31 |
| AT3G06340.4 | Thale cress | cytosol | 23.92 | 13.22 |
| PGSC0003DMT400038431 | Potato | nucleus | 27.96 | 13.21 |
| AT5G50115.1 | Thale cress | cytosol | 16.67 | 12.78 |
| AT2G25560.1 | Thale cress | cytosol | 19.62 | 11.13 |
| AT2G35540.1 | Thale cress | nucleus | 17.47 | 11.02 |
| AT5G53150.3 | Thale cress | cytosol | 22.04 | 10.86 |
| AT2G05250.1 | Thale cress | cytosol | 19.62 | 10.34 |
| AT2G05230.1 | Thale cress | cytosol | 19.62 | 10.34 |
| Solyc01g098250.2.1 | Tomato | nucleus | 27.15 | 10.17 |
| Solyc01g098340.2.1 | Tomato | cytosol | 21.77 | 10.12 |
| PGSC0003DMT400057887 | Potato | cytosol | 22.58 | 9.98 |
| AT5G18750.1 | Thale cress | nucleus | 23.39 | 9.84 |
| AT5G27240.1 | Thale cress | nucleus | 28.23 | 9.51 |
| PGSC0003DMT400057904 | Potato | nucleus | 26.88 | 9.25 |
| KRH68628 | Soybean | cytosol | 26.34 | 9.18 |
| KRG96896 | Soybean | cytosol | 26.08 | 9.17 |
| AT3G04980.2 | Thale cress | nucleus | 26.08 | 8.2 |
| AT3G06778.1 | Thale cress | cytosol | 4.3 | 6.99 |
| AT5G37750.1 | Thale cress | cytosol | 4.3 | 6.64 |
| AT5G62780.1 | Thale cress | cytosol | 3.49 | 6.28 |
| AT5G37440.1 | Thale cress | cytosol | 4.57 | 5.92 |
| AT4G19570.1 | Thale cress | nucleus | 8.33 | 5.56 |
| AT4G19590.2 | Thale cress | nucleus | 4.3 | 4.28 |
| AT5G37380.6 | Thale cress | nucleus | 4.84 | 4.18 |
| KRH34003 | Soybean | cytosol | 2.96 | 3.78 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 3.23 | 3.51 |
| AT4G19580.1 | Thale cress | cytosol | 2.69 | 3.21 |
| AT5G37760.1 | Thale cress | cytosol | 1.61 | 2.9 |
| KRH34004 | Soybean | cytosol | 2.42 | 2.83 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819673 | ProteinID:AAF27017.1 | ProteinID:AEE74187.1 | ArrayExpress:AT3G05110 | EnsemblPlantsGene:AT3G05110 |
| RefSeq:AT3G05110 | TAIR:AT3G05110 | RefSeq:AT3G05110-TAIR-G | EnsemblPlants:AT3G05110.1 | TAIR:AT3G05110.1 | ncoils:Coil |
| InterPro:DUF3444 | GO:GO:0008150 | RefSeq:NP_187162.1 | PFAM:PF11926 | PO:PO:0001078 | PO:PO:0007616 |
| PO:PO:0009010 | PO:PO:0009052 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 | UniProt:Q9MAA8 | UniParc:UPI000009E37A |
| SEG:seg | : | : | : | : | : |
Description
Early endosome antigen-like protein, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:Q9MAA8]
Coordinates
chr3:-:1426107..1427719
Molecular Weight (calculated)
43079.3 Da
IEP (calculated)
4.724
GRAVY (calculated)
-0.824
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPENPQLFT LRSETPEKES VPAQTEDQSR ERVSDLEQIQ KEDSSEEICT ESERMRKETE LIETSLKQLE ARENELREVE AKRKFFDLKE KELEEKEKEL
101: ELKQRQVQER SIQDGPSVDA EPLTQQRNHN DEDKEKDSAS VLSASVQIIE NDEDHEPVMC VVDSEFNDFR KTMSSFMAGQ VWALYDGIDS MPRCYGRIKK
201: VNKCQSSLQV TWLEPKAEES VLAACGRFKW ENTDTIQSHL AFSHEIHPII RGKHFIAVNP SKGETWALFR DWSKSWNNDP EQHKTPYRYD FVEVLVSFDD
301: SLGVGVAYLG KVQGFASVYK QAVQHGVISF MITPEEMQRF SHRVPSFRLN GDEKEGIPSC YPCCYPQLHT RA
101: ELKQRQVQER SIQDGPSVDA EPLTQQRNHN DEDKEKDSAS VLSASVQIIE NDEDHEPVMC VVDSEFNDFR KTMSSFMAGQ VWALYDGIDS MPRCYGRIKK
201: VNKCQSSLQV TWLEPKAEES VLAACGRFKW ENTDTIQSHL AFSHEIHPII RGKHFIAVNP SKGETWALFR DWSKSWNNDP EQHKTPYRYD FVEVLVSFDD
301: SLGVGVAYLG KVQGFASVYK QAVQHGVISF MITPEEMQRF SHRVPSFRLN GDEKEGIPSC YPCCYPQLHT RA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.