Factsheet for PGSC0003DMT400057887

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g098340.2.1	Tomato	cytosol	87.77	92.38
PGSC0003DMT400057888	Potato	cytosol	17.7	75.25
PGSC0003DMT400057894	Potato	cytosol	28.86	62.63
PGSC0003DMT400089411	Potato	cytosol	15.2	57.14
PGSC0003DMT400057904	Potato	nucleus	65.08	50.69
PGSC0003DMT400085016	Potato	cytosol	6.77	43.85
Bra039476.1-P	Field mustard	cytosol	9.86	40.29
PGSC0003DMT400058788	Potato	nucleus	21.62	37.22
CDX88917	Canola	nucleus	14.49	36.75
PGSC0003DMT400094016	Potato	nucleus	12.59	36.18
PGSC0003DMT400086601	Potato	cytosol	8.55	35.82
PGSC0003DMT400086295	Potato	mitochondrion	9.03	34.86
CDX70837	Canola	mitochondrion	20.55	34.33
PGSC0003DMT400038431	Potato	nucleus	31.71	33.93
PGSC0003DMT400080343	Potato	cytosol	24.58	33.55
PGSC0003DMT400092645	Potato	cytosol	5.11	33.33
PGSC0003DMT400096427	Potato	cytosol	23.52	32.2
AT5G18730.1	Thale cress	cytosol	19.95	31.82
PGSC0003DMT400057893	Potato	cytosol	18.29	31.82
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	10.57	31.23
CDY13918	Canola	nucleus	21.14	31.06
Bra002183.1-P	Field mustard	nucleus	20.78	30.81
Bra006478.1-P	Field mustard	nucleus	19.36	30.64
Bra006479.1-P	Field mustard	cytosol	19.95	30.43
CDX88918	Canola	cytosol	19.12	30.26
CDX70843	Canola	extracellular, golgi	18.88	29.39
PGSC0003DMT400085685	Potato	plastid	5.82	28.66
PGSC0003DMT400097263	Potato	cytosol	4.87	28.28
GSMUA_Achr11P...	Banana	nucleus	21.73	27.98
CDX92586	Canola	nucleus	11.28	27.14
TraesCS4A01G214500.1	Wheat	nucleus	21.38	26.87
AT5G18740.1	Thale cress	nucleus	13.54	26.51
PGSC0003DMT400058792	Potato	nucleus	28.38	26.06
PGSC0003DMT400094974	Potato	cytosol	8.43	26.01
Os11t0574200-00	Rice	cytosol	10.1	25.99
GSMUA_Achr2P02410_001	Banana	cytosol	23.87	25.97
Bra006476.1-P	Field mustard	nucleus	18.05	25.85
CDX88920	Canola	nucleus	18.05	25.85
CDX70840	Canola	nucleus	17.81	25.68
PGSC0003DMT400092668	Potato	cytosol	4.51	25.68
GSMUA_Achr5P00460_001	Banana	cytosol	21.85	25.31
CDX88924	Canola	plastid	21.14	25.18
Bra006473.1-P	Field mustard	plastid	20.9	25.04
Zm00001d040846_P001	Maize	cytosol	27.32	24.57
Bra024236.1-P	Field mustard	nucleus	10.69	24.46
PGSC0003DMT400054841	Potato	cytosol	14.25	24.29
VIT_14s0030g00640.t01	Wine grape	nucleus	33.37	24.04
KRH68628	Soybean	cytosol	29.81	23.52
KRG96896	Soybean	cytosol	29.33	23.35
EES00793	Sorghum	cytosol	26.84	23.13
PGSC0003DMT400092747	Potato	cytosol	6.65	22.76
Zm00001d052947_P001	Maize	plastid	23.28	22.66
AT3G05110.1	Thale cress	nucleus	9.98	22.58
TraesCS4B01G101500.1	Wheat	cytosol	23.28	21.88
HORVU2Hr1G084660.1	Barley	cytosol	22.57	21.84
Os01t0375100-01	Rice	nucleus	26.13	21.83
TraesCS3A01G213800.3	Wheat	nucleus	26.48	21.8
TraesCS3D01G215900.1	Wheat	nucleus	26.37	21.68
EER88793	Sorghum	cytosol	24.35	21.62
TraesCS3B01G244000.4	Wheat	nucleus	26.37	21.47
TraesCS2D01G077700.1	Wheat	cytosol	21.97	21.44
TraesCS2B01G095100.1	Wheat	cytosol	21.97	21.41
HORVU2Hr1G013270.2	Barley	cytosol	22.09	21.4
TraesCS2B01G366100.1	Wheat	cytosol	23.04	21.11
KRG92798	Soybean	cytosol	17.58	20.87
KXG28768	Sorghum	nucleus	24.11	20.82
TraesCS2A01G347700.1	Wheat	mitochondrion	22.68	20.78
CDX99992	Canola	cytosol	23.16	20.72
CDY19714	Canola	nucleus	23.63	20.69
CDY29872	Canola	cytosol	10.81	20.4
Os11t0578100-00	Rice	cytosol	25.42	20.32
CDY27809	Canola	nucleus	23.75	20.16
HORVU6Hr1G033850.1	Barley	cytosol	23.28	20.1
TraesCS6B01G194500.1	Wheat	cytosol	23.28	20.08
HORVU4Hr1G043860.4	Barley	cytosol	22.57	20.02
TraesCS6A01G167100.1	Wheat	cytosol	23.16	19.98
TraesCS6D01G155600.1	Wheat	cytosol	23.04	19.88
AT5G27240.1	Thale cress	nucleus	26.01	19.84
HORVU3Hr1G051850.2	Barley	nucleus	26.6	19.81
TraesCS2A01G084900.1	Wheat	nucleus	24.11	19.63
CDX92856	Canola	nucleus	10.93	19.57
Os06t0535300-01	Rice	nucleus	23.63	19.55
EER98396	Sorghum	nucleus	26.37	19.46
Zm00001d008412_P001	Maize	cytosol	23.52	19.43
OQU83710	Sorghum	cytosol	22.45	19.4
KXG32106	Sorghum	cytosol	23.28	19.39
Zm00001d019461_P002	Maize	cytosol	25.65	19.35
Zm00001d008413_P001	Maize	cytosol	23.16	19.16
HORVU7Hr1G050080.1	Barley	nucleus	23.52	19.15
Bra039477.1-P	Field mustard	plastid	12.23	19.14
CDY27811	Canola	nucleus	10.81	19.0
EES09993	Sorghum	nucleus	24.7	18.86
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	9.26	18.7
Bra039461.1-P	Field mustard	cytosol	11.76	18.57
TraesCS2D01G082800.1	Wheat	nucleus	23.99	18.38
CDX80667	Canola	nucleus	14.49	18.35
TraesCS2B01G099600.2	Wheat	nucleus	23.87	18.32
TraesCS1B01G054900.1	Wheat	nucleus	25.65	18.12
TraesCS1D01G042900.1	Wheat	nucleus	25.53	18.04
Bra009972.1-P	Field mustard	nucleus	13.42	17.96
CDX86172	Canola	nucleus	13.42	17.96
CDY27796	Canola	cytosol	11.28	17.96
TraesCS1A01G042500.1	Wheat	nucleus	25.3	17.9
HORVU1Hr1G008940.2	Barley	nucleus	25.42	17.86
OQU83709	Sorghum	cytosol	24.58	17.81
CDY41935	Canola	cytosol	11.16	17.67
TraesCS2D01G078000.1	Wheat	cytosol	13.42	17.57
AT3G04960.3	Thale cress	cytosol	12.59	17.52
TraesCS2A01G080400.1	Wheat	cytosol	16.63	17.39
OQU83714	Sorghum	cytosol, nucleus, plastid	21.14	16.86
CDY41919	Canola	nucleus, plastid	23.75	16.79
AT3G04980.2	Thale cress	nucleus	23.28	16.57
AT4G27980.2	Thale cress	cytosol	11.4	15.92
CDX70844	Canola	mitochondrion, plasma membrane	15.2	14.99
Bra002182.1-P	Field mustard	nucleus	19.24	14.93
Os11t0573800-00	Rice	nucleus	15.91	14.6
PGSC0003DMT400023514	Potato	cytosol	12.0	13.74
EES08665	Sorghum	nucleus	11.05	13.7
PGSC0003DMT400039476	Potato	nucleus	12.83	13.42
Bra039474.1-P	Field mustard	nucleus	23.28	12.84
Bra006477.1-P	Field mustard	cytosol	20.9	12.8
PGSC0003DMT400059130	Potato	cytosol	11.76	12.72
CDX70841	Canola	nucleus	20.78	12.09
PGSC0003DMT400048481	Potato	cytosol	10.81	11.62
TraesCS2D01G077900.1	Wheat	cytosol	7.24	11.3
PGSC0003DMT400015678	Potato	nucleus	10.45	11.17
CDX88919	Canola	cytosol	20.55	10.94
CDY41917	Canola	nucleus	11.52	10.15
PGSC0003DMT400047612	Potato	nucleus	10.21	9.38
PGSC0003DMT400003010	Potato	nucleus	2.02	6.69
KRH34004	Soybean	cytosol	1.78	4.72
KRH34003	Soybean	cytosol	1.31	3.78
PGSC0003DMT400039473	Potato	nucleus	0.59	3.38

Protein Annotations

EnsemblPlants:PGSC0003DMT400057887	EnsemblPlantsGene:PGSC0003DMG400022478	InterPro:DUF3444	ncoils:Coil	PANTHER:PTHR45089	PFAM:PF11926
PGSC:PGSC0003DMG400022478	SEG:seg	UniParc:UPI0002952EEE	UniProt:M1C1U3	MapMan:35.2	:

Description

Heat shock protein DnaJ [Source:PGSC_GENE;Acc:PGSC0003DMG400022478]

Coordinates

chr1:+:75937370..75941504

Molecular Weight (calculated)

94493.1 Da

IEP (calculated)

6.474

GRAVY (calculated)

-0.542

Length

842 amino acids

Sequence
(BLAST)

001: MEPEDKTLFC FCHWGKKNKV LPDGSASYVG GITRQVIAKT GIKYNDFVNA VFDRLCIDPS DKILHFTVKF DRSQLIQLSD QEDVNTLLQF NDDFAHVYVS
101: SLEMEPHSRL PSVGVKKIEP VVFDLELDTN PVRNDENDLA SPLKKAQSNQ SAGESNPLKK AWAHQSVKDS KPQQKEAVGS DNQKHAGVTR SCGNSIEKLN
201: QNGAGLPEGV LQNDNSKVGT DNEQASGGAK KVELIIDSDS DSDSESESNT VPDGNLPEVY DYPDPEFSVF DKHKAQNCFA IDQIWACYDT ADGMPRFYAH
301: IRKVYSPEFK VMFSWLDAYP EDQRGRAWVR AELPVGCGKF RRGSTEFTSD RLTFSHQVQC GMGKRGLYIV YPRKGETWAL FKDWDISWSS EPDNHRKYKY
401: EIVEILSDYA VDVGVLVGYL DKVSRFVSLF QRMRPTEVGT FFVKPNELYK FSHQIPSFKM TGTEREGVPA GSFELDPASL PLNPDDIWYP GRVMEDSRAA
501: NSEPVENDLP AVPLGARDKS RKATTSLKSG DDIHATNGES SKVQIPPKKM NISEKKRTQM SSCSANDGPS TDFDDNCVKK SRHSSPRMPI HLSCQADREL
601: HSRTKRFGLS NSIGSSTKVS TFSDDKGFEE TFCDFEMDRS TGKFQVNQVW AIYGQNSTLP NTYALVKKIV SAPFKLHVVL LESCAGPKNA AQSVCGMFKV
701: QNEKHQACDP SSFSHVVKAI SVKNRFEIYP REGEIWALYK SLKKSGLDPD KFEYEIVEVI EYSKDWIKVS SLVRVNGFKS VFKKQTSNSI ILEIQKDEFW
801: RFSHQIPAFQ LTGEKGGVLR GCWELDPAAV PCSLLIDALV SV

Best Arabidopsis Sequence Match ( AT5G27240.3 )
(BLAST)

0001: MDWNKEEACR AKTLAEDKMK EGDFVGAQKL LLKAQSLFSG LESLPQMLAV CDVHNSAEKK INCLENWYGI LQVMHFADDA TIKKQVRKLA LLLHPDKNQF
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.