Factsheet for PGSC0003DMT400080343

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400096427	Potato	cytosol	90.28	90.57
PGSC0003DMT400094016	Potato	nucleus	42.46	89.42
Solyc01g057750.1.1	Tomato	cytosol	86.55	86.13
PGSC0003DMT400058788	Potato	nucleus	59.16	74.64
PGSC0003DMT400085016	Potato	cytosol	13.61	64.62
PGSC0003DMT400086601	Potato	cytosol	19.61	60.2
PGSC0003DMT400086295	Potato	mitochondrion	20.42	57.8
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	24.31	52.63
PGSC0003DMT400058792	Potato	nucleus	74.88	50.38
PGSC0003DMT400092668	Potato	cytosol	11.67	48.65
PGSC0003DMT400057888	Potato	cytosol	13.61	42.42
PGSC0003DMT400089411	Potato	cytosol	12.32	33.93
PGSC0003DMT400094974	Potato	cytosol	12.8	28.94
PGSC0003DMT400057894	Potato	cytosol	18.15	28.87
PGSC0003DMT400092645	Potato	cytosol	5.35	25.58
PGSC0003DMT400097263	Potato	cytosol	5.83	24.83
PGSC0003DMT400057887	Potato	cytosol	33.55	24.58
PGSC0003DMT400085685	Potato	plastid	6.48	23.39
PGSC0003DMT400092747	Potato	cytosol	9.24	23.17
PGSC0003DMT400057893	Potato	cytosol	17.18	21.9
PGSC0003DMT400057904	Potato	nucleus	37.44	21.37
PGSC0003DMT400054841	Potato	cytosol	16.86	21.05
GSMUA_Achr8P00660_001	Banana	cytosol	17.02	17.44
PGSC0003DMT400038431	Potato	nucleus	22.04	17.28
GSMUA_Achr11P...	Banana	cytosol	13.13	16.14
Os04t0388800-01	Rice	nucleus	15.4	15.89
Zm00001d050565_P001	Maize	cytosol	15.72	15.06
Zm00001d025585_P001	Maize	cytosol	17.34	14.6
Zm00001d025584_P001	Maize	cytosol	17.34	14.6
Os03t0401200-01	Rice	cytosol	17.67	14.57
PGSC0003DMT400039476	Potato	nucleus	18.96	14.53
GSMUA_Achr3P02570_001	Banana	nucleus	12.32	14.53
Zm00001d025238_P001	Maize	cytosol	17.18	14.44
OQU85000	Sorghum	cytosol	17.02	14.42
EES10633	Sorghum	cytosol	17.18	14.42
TraesCS2D01G283100.2	Wheat	cytosol	17.02	14.32
TraesCS2A01G284200.2	Wheat	cytosol	17.02	14.32
GSMUA_Achr2P21160_001	Banana	cytosol	12.48	14.31
EES07899	Sorghum	cytosol	17.02	14.29
Zm00001d003948_P001	Maize	cytosol	17.02	14.27
GSMUA_Achr10P...	Banana	cytosol	14.1	14.19
Os02t0510000-01	Rice	cytosol	16.86	14.17
TraesCS3A01G536400.1	Wheat	cytosol	17.02	14.15
TraesCS3B01G607500.1	Wheat	cytosol	17.02	14.15
EES10933	Sorghum	cytosol	16.53	14.09
GSMUA_Achr6P12230_001	Banana	nucleus	13.13	13.97
TraesCS3D01G541800.1	Wheat	cytosol	16.86	13.94
PGSC0003DMT400023514	Potato	cytosol	16.53	13.88
PGSC0003DMT400059130	Potato	cytosol	17.02	13.5
TraesCS2B01G301100.1	Wheat	cytosol	15.23	13.31
TraesCS5A01G493100.1	Wheat	cytosol	16.37	13.27
TraesCS4D01G315600.1	Wheat	cytosol	16.21	13.14
PGSC0003DMT400015678	Potato	nucleus	16.69	13.07
Os01t0923800-01	Rice	nucleus	15.56	12.9
TraesCS3B01G470100.1	Wheat	nucleus	15.07	12.81
TraesCS3A01G435100.1	Wheat	nucleus	15.88	12.39
PGSC0003DMT400048481	Potato	cytosol	15.4	12.13
Zm00001d011997_P001	Maize	nucleus	15.23	11.44
KXG34016	Sorghum	nucleus	15.07	11.22
TraesCS4B01G319100.1	Wheat	cytosol	12.64	10.96
PGSC0003DMT400047612	Potato	nucleus	13.13	8.83
PGSC0003DMT400039473	Potato	nucleus	1.62	6.76
KRG89459	Soybean	cytosol	1.13	6.42
PGSC0003DMT400003010	Potato	nucleus	2.43	5.91
CDX76473	Canola	cytosol	1.62	4.13
Bra020955.1-P	Field mustard	cytosol	1.62	3.55
CDY09330	Canola	cytosol	0.65	1.78

Protein Annotations

EnsemblPlants:PGSC0003DMT400080343	EnsemblPlantsGene:PGSC0003DMG400031282	InterPro:DUF3444	PANTHER:PTHR45089	PFAM:PF11926	PGSC:PGSC0003DMG400031282
SEG:seg	UniParc:UPI00029665D0	UniProt:M1D3C9	MapMan:35.2	:	:

Description

Heat shock protein DnaJ N-terminal domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031282]

Coordinates

chr1:+:35426907..35428760

Molecular Weight (calculated)

70906.4 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.453

Length

617 amino acids

Sequence
(BLAST)

001: MDCNKEKAIK AKGVAEEMMG NNRKRASIKS SENWAVSDHL PGQNLQCLNE ENWLRSTWRR HRINYCDNLS DDEDSSKRFK GVGYPSPTKE SEMQHLSNAA
101: TPNGERKKLK DCLSYEESFQ KTKMEIETAN GSVDVGLCTM TEPKSFEYPD PDFSDFDKDK NESCFKVGQV WAVYDTLDGM PRFYGIIREI LSPEFKLRIT
201: WLEPEPLNET KWLYEGFLPS YGRFKIGNLD HIEDHLMFSH LVCATNGNNN DAIKIFPLKG ETWALLKDWG SKNLNYEFVE VLSNFNESIG VHVGYLDKTK
301: GFTCLFHRVG DPFLVPAKGM FRFSHRIPSM KMTGMERDDV PEESFELDPT SLPIYQVDVS ASSIDQSAIA NFMGSVNSAE NWVAPIPNQV HEPEFYRFAA
401: ERLPEKFQIG QCWAIYSNED ALPRYYGLIK KIDLLPQFVL HVAWFYACPL PKSTIQWHDK TMPIGCGLFK FLNSKLNKYT VTNNFSHVVV AEPLKKGVYK
501: IFPKTGEVWA VYKNWSAQLM KGNNLKDFEY EIVEIVDVSD NYVDVKLLEW VKGFKSVYKA RVEEEKADKA VKICISEHLR FSHRIPAFRL TEERGGSLRG
601: FWELDTAGLP LCLLCTD

Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)

001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.