Factsheet for TraesCS3A01G435100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G122400.1
TraesCS2B01G144600.1
TraesCS4A01G165000.4
TraesCS4A01G171800.3
TraesCS4B01G145600.4
TraesCS4D01G143400.3
TraesCS4D01G150000.4
TraesCS5A01G040700.1
TraesCS5A01G366000.1
TraesCS5B01G041900.1
TraesCS5B01G067400.1
TraesCS5B01G368400.1
TraesCS5D01G071600.1
TraesCS5D01G071700.1
TraesCS5D01G375600.1
TraesCS6A01G074100.1
TraesCSU01G068100.3
TraesCSU01G086500.1
TraesCSU01G123400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	TraesCS2A01G122400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS2B01G144600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS4A01G165000.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS4A01G171800.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS4B01G145600.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS4D01G143400.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS4D01G150000.4	AT4G36690.1	21798944
AT2G05230.1	TraesCS5A01G040700.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5A01G366000.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G041900.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G067400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5B01G368400.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G071600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G071700.1	AT4G36690.1	21798944
AT2G05230.1	TraesCS5D01G375600.1	AT4G36690.1	21798944
AT2G05230.1	TraesCSU01G068100.3	AT4G36690.1	21798944
AT2G05230.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT2G05230.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT2G05230.1	TraesCSU01G123400.1	AT5G60340.1	21798944
AT2G05250.1	TraesCS2A01G122400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS2B01G144600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS4A01G165000.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS4A01G171800.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS4B01G145600.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS4D01G143400.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS4D01G150000.4	AT4G36690.1	21798944
AT2G05250.1	TraesCS5A01G040700.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5A01G366000.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G041900.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G067400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5B01G368400.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G071600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G071700.1	AT4G36690.1	21798944
AT2G05250.1	TraesCS5D01G375600.1	AT4G36690.1	21798944
AT2G05250.1	TraesCSU01G068100.3	AT4G36690.1	21798944
AT2G05250.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT2G05250.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT2G05250.1	TraesCSU01G123400.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G470100.1	Wheat	nucleus	88.37	96.28
HORVU3Hr1G095280.1	Barley	nucleus	57.77	91.4
Os01t0923800-01	Rice	nucleus	49.05	52.15
KXG34016	Sorghum	nucleus	49.81	47.53
Zm00001d011997_P001	Maize	nucleus	49.18	47.32
VIT_01s0010g03770.t01	Wine grape	cytosol	14.41	47.11
Bra031906.1-P	Field mustard	cytosol	5.44	46.74
Bra020958.1-P	Field mustard	cytosol	5.94	46.08
CDX76476	Canola	cytosol	5.94	46.08
CDY31307	Canola	cytosol	5.31	45.65
PGSC0003DMT400039473	Potato	nucleus	8.47	45.27
VIT_17s0000g01140.t01	Wine grape	cytosol	14.16	44.44
Solyc03g019630.1.1	Tomato	nucleus	8.72	44.23
KRG89459	Soybean	cytosol	6.07	44.04
CDX99361	Canola	cytosol	7.84	42.47
CDY60891	Canola	cytosol, mitochondrion, nucleus	8.98	40.8
Bra020957.1-P	Field mustard	cytosol	10.37	39.81
CDX76475	Canola	cytosol	10.24	39.32
Solyc03g007280.2.1	Tomato	cytosol	9.36	37.95
KRH53452	Soybean	cytosol	33.12	37.86
KRH64496	Soybean	nucleus	32.87	37.57
TraesCS3A01G536400.1	Wheat	cytosol	33.75	35.98
TraesCS5A01G493100.1	Wheat	cytosol	34.26	35.61
Bra034258.1-P	Field mustard	cytosol	27.69	35.38
VIT_16s0050g02590.t01	Wine grape	cytosol	32.62	34.72
PGSC0003DMT400023514	Potato	cytosol	32.11	34.56
CDY35353	Canola	cytosol	27.18	34.51
VIT_01s0010g03760.t01	Wine grape	cytosol	35.4	34.27
CDX76994	Canola	nucleus	25.16	34.19
CDY19683	Canola	cytosol	29.58	33.77
CDY49460	Canola	nucleus	27.81	33.74
VIT_12s0057g00710.t01	Wine grape	cytosol	29.46	33.57
TraesCS2A01G284200.2	Wheat	cytosol	31.1	33.56
KRH14137	Soybean	nucleus	29.96	33.52
Bra003079.1-P	Field mustard	cytosol	29.96	33.43
CDX99362	Canola	nucleus	12.01	33.33
CDY09330	Canola	cytosol	9.48	33.33
KRH73997	Soybean	nucleus	29.58	33.19
KRH18160	Soybean	nucleus	32.11	32.94
AT2G25560.1	Thale cress	cytosol	27.18	32.77
KRH09248	Soybean	nucleus	32.11	32.61
KRH16532	Soybean	cytosol	31.73	32.6
CDX76474	Canola	cytosol	9.86	32.5
CDY60893	Canola	cytosol	6.45	32.08
CDY60894	Canola	cytosol	6.45	32.08
CDX78942	Canola	cytosol	12.39	32.03
CDX76473	Canola	cytosol	9.73	31.82
PGSC0003DMT400059130	Potato	cytosol	31.23	31.75
CDY27107	Canola	nucleus	14.66	31.69
PGSC0003DMT400039476	Potato	nucleus	32.11	31.55
KRH38748	Soybean	nucleus	31.86	31.03
CDY60890	Canola	cytosol	9.48	30.99
Solyc01g044270.2.1	Tomato	cytosol	30.47	30.98
Bra038959.1-P	Field mustard	nucleus	15.04	30.91
CDX76752	Canola	nucleus	24.15	30.86
Bra007790.1-P	Field mustard	nucleus	23.01	30.74
CDY11521	Canola	nucleus	23.01	30.74
CDY12382	Canola	nucleus	14.16	30.6
AT5G53150.3	Thale cress	cytosol	29.08	30.46
CDX99360	Canola	cytosol	12.77	30.33
VIT_17s0000g01150.t01	Wine grape	nucleus	33.5	29.91
KRH54176	Soybean	nucleus	29.96	29.89
Bra035378.1-P	Field mustard	cytosol	25.79	29.65
PGSC0003DMT400048481	Potato	cytosol	29.2	29.5
AT5G50115.1	Thale cress	cytosol	18.08	29.48
AT5G37380.6	Thale cress	nucleus	16.06	29.47
Solyc05g040050.1.1	Tomato	nucleus	28.95	29.25
PGSC0003DMT400085016	Potato	cytosol	4.8	29.23
PGSC0003DMT400015678	Potato	nucleus	29.08	29.19
Bra020955.1-P	Field mustard	cytosol	10.37	29.08
Solyc07g047690.1.1	Tomato	nucleus	28.95	29.06
TraesCS7A01G033400.1	Wheat	plastid	16.56	29.05
CDX74632	Canola	cytosol	21.49	28.96
CDY47298	Canola	cytosol	21.37	28.94
KRH63773	Soybean	nucleus	29.71	28.91
AT2G05230.1	Thale cress	cytosol	25.66	28.75
AT2G05250.1	Thale cress	cytosol	25.66	28.75
Bra013179.1-P	Field mustard	nucleus	24.91	28.43
CDX93081	Canola	nucleus	24.91	28.43
CDY15046	Canola	nucleus	24.78	28.41
CDY60010	Canola	cytosol, mitochondrion, nucleus	7.84	28.18
PGSC0003DMT400086295	Potato	mitochondrion	7.71	27.98
TraesCS4A01G456000.1	Wheat	plastid	15.93	27.94
AT5G35753.1	Thale cress	cytosol	14.92	27.51
Solyc03g019640.1.1	Tomato	nucleus	31.73	27.02
Bra020956.1-P	Field mustard	nucleus	11.88	26.93
PGSC0003DMT400092645	Potato	cytosol	4.17	25.58
CDY12569	Canola	cytosol	11.25	24.86
AT4G19580.1	Thale cress	cytosol	9.73	24.68
Bra040300.1-P	Field mustard	cytosol	11.38	24.39
PGSC0003DMT400092668	Potato	cytosol	4.55	24.32
Bra013404.1-P	Field mustard	nucleus	12.26	21.75
AT5G62780.1	Thale cress	cytosol	5.69	21.74
Solyc01g057650.1.1	Tomato	cytosol	4.55	21.05
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	7.46	20.7
Bra013403.1-P	Field mustard	nucleus	13.91	20.3
CDX78941	Canola	nucleus	14.03	20.11
AT4G19570.1	Thale cress	nucleus	13.15	18.64
TraesCS4A01G365000.1	Wheat	cytosol	6.32	18.38
TraesCS6A01G167100.1	Wheat	cytosol	22.38	18.14
Solyc07g039220.1.1	Tomato	cytosol	7.71	17.28
TraesCS3A01G213800.3	Wheat	nucleus	22.12	17.11
TraesCS2A01G084900.1	Wheat	nucleus	21.87	16.73
PGSC0003DMT400080343	Potato	cytosol	12.39	15.88
Solyc01g057750.1.1	Tomato	cytosol	12.39	15.81
PGSC0003DMT400096427	Potato	cytosol	12.26	15.77
TraesCS1A01G042500.1	Wheat	nucleus	22.0	14.62
TraesCS3A01G441600.4	Wheat	cytosol	12.9	13.55
TraesCS2A01G080400.1	Wheat	cytosol	13.15	12.92
TraesCS4A01G214500.1	Wheat	nucleus	10.75	12.69
TraesCS2A01G347700.1	Wheat	mitochondrion	13.53	11.64
Bra002184.1-P	Field mustard	cytosol	0.13	0.38

Protein Annotations

EnsemblPlants:TraesCS3A01G435100.1	EnsemblPlantsGene:TraesCS3A01G435100	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44137	PANTHER:PTHR44137:SF5	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
TIGR:cd06257	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:677871579..677874948

Molecular Weight (calculated)

89279.5 Da

IEP (calculated)

8.585

GRAVY (calculated)

-0.926

Length

791 amino acids

Sequence
(BLAST)

001: MECNKDEAIR SKEMAERKYK VNDFAGARKF ALKAKGLFDL EGIDQMIVAL DVHLRSLKKF EGENDWYGIL EVSTWADEET IRKQYKKLAL QTHPDKNSFV
101: GADSAFNLIS DAWNVLSDKN KRILHDQRRH MSSLRVLQNN SQVSVDNTSS SSMPSMNGFC RQNTGPASPP SVPTPNIPKL STFWTVCISC RMNFEYPRQY
201: VNQYMICPEC HKPFKAEEVP PPPTSSHTYQ PKSMDTNSSR GRTACPGEGM AGTGVASGSR NHHNPMQQRC SFQGSAGGAH TFSHSVQQTH GTVSGSSGSS
301: IPRKAAARKE KEAAKKRYKK VAPQSTSSGL DGDSSSQNKA KRKARSTDRA SGAKRRKETS NCPVSAGSSF IKEMEKLDMR SLLINKMKLQ LRDKLEEFNR
401: KKADMENGRK MQTSQRTNKA ATCSTSVDAK KMKRTQRSSS VHPEEDNGKK LNSERKRAEK RKHAGSEEMG SWEWKKPEIR IFYTRRSRRE QEPSPDEMLV
501: PDADFYAFGD HSGNSFQKDQ VWATYDEEDG MPRYYALIQT VHSRRPFKVT FAFLKADNPD EFGASNWLSC GFSKTCGDFK PGASEDADEL NKFSHLVACQ
601: KGPGRRIIRI LPRKGDIWAL YQNWSADWDE LVPDETMYKY DLVQVLDSYS PSEGLSVMPI EKVPGFVSVF KPLSDPAKSR RIPEEEMTRF SHQVPFHILT
701: GEEAHNSPKG CYELDPGSTP KELLQERAYM MLRMNGGGES SNYGSSEAGS YEHEHEELEH HHRVHHQEHP GGVHGDRDDD LKAEGEGYLE E

Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.