CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54176	Soybean	nucleus	87.82	90.04
KRH53452	Soybean	cytosol	38.87	45.66
KRH64496	Soybean	nucleus	38.38	45.09
KRG89459	Soybean	cytosol	6.03	44.95
GSMUA_Achr8P00660_001	Banana	cytosol	33.21	44.85
KRH16532	Soybean	cytosol	39.11	41.3
KRH18160	Soybean	nucleus	39.11	41.25
VIT_17s0000g01150.t01	Wine grape	nucleus	44.28	40.63
GSMUA_Achr11P...	Banana	cytosol	24.97	40.44
GSMUA_Achr10P...	Banana	cytosol	30.38	40.29
GSMUA_Achr2P21160_001	Banana	cytosol	26.45	39.96
GSMUA_Achr6P12230_001	Banana	nucleus	27.68	38.79
KRH09248	Soybean	nucleus	36.78	38.38
KRH38748	Soybean	nucleus	38.25	38.3
PGSC0003DMT400039476	Potato	nucleus	37.39	37.76
TraesCS2D01G283100.2	Wheat	cytosol	33.83	37.52
TraesCS2A01G284200.2	Wheat	cytosol	33.83	37.52
Zm00001d003948_P001	Maize	cytosol	33.95	37.5
Zm00001d025238_P001	Maize	cytosol	33.83	37.47
Os02t0510000-01	Rice	cytosol	33.7	37.33
TraesCS2B01G301100.1	Wheat	cytosol	32.23	37.11
EES10633	Sorghum	cytosol	33.46	37.01
OQU85000	Sorghum	cytosol	33.09	36.95
GSMUA_Achr3P02570_001	Banana	nucleus	23.74	36.9
KRH14137	Soybean	nucleus	31.86	36.63
Zm00001d025584_P001	Maize	cytosol	32.96	36.56
TraesCS3D01G541800.1	Wheat	cytosol	33.46	36.46
KRH73997	Soybean	nucleus	31.61	36.45
TraesCS3B01G607500.1	Wheat	cytosol	33.21	36.39
TraesCS3A01G536400.1	Wheat	cytosol	33.09	36.25
Zm00001d025585_P001	Maize	cytosol	32.47	36.02
Zm00001d050565_P001	Maize	cytosol	28.41	35.87
Os03t0401200-01	Rice	cytosol	32.84	35.7
EES07899	Sorghum	cytosol	31.61	34.97
Os04t0388800-01	Rice	nucleus	25.34	34.45
TraesCS5A01G493100.1	Wheat	cytosol	32.23	34.43
TraesCS4D01G315600.1	Wheat	cytosol	31.98	34.17
EES10933	Sorghum	cytosol	30.26	33.98
Solyc03g019640.1.1	Tomato	nucleus	37.39	32.72
TraesCS3B01G470100.1	Wheat	nucleus	28.78	32.23
TraesCS4B01G319100.1	Wheat	cytosol	27.55	31.46
Os01t0923800-01	Rice	nucleus	27.92	30.51
TraesCS3A01G435100.1	Wheat	nucleus	28.91	29.71
KRH74334	Soybean	cytosol, nucleus	20.17	29.23
KRH39596	Soybean	nucleus	20.66	29.02
KXG34016	Sorghum	nucleus	28.54	27.99
Zm00001d011997_P001	Maize	nucleus	27.8	27.49
KRH34003	Soybean	cytosol	9.59	26.8
KRG92798	Soybean	cytosol	21.65	24.82
KRH34004	Soybean	cytosol	9.59	24.53
KRH37055	Soybean	cytosol	8.12	24.44
KRH12028	Soybean	cytosol	8.12	24.44
KRH50796	Soybean	cytosol, nucleus, peroxisome	7.26	23.69
KRH02299	Soybean	cytosol	7.75	23.51
KRH50936	Soybean	nucleus	24.97	21.19
KRH11282	Soybean	nucleus	24.23	20.35
KRH21004	Soybean	nucleus	23.99	20.14
KRH02180	Soybean	cytosol, nucleus, plastid	24.85	19.35
KRG96896	Soybean	cytosol	24.11	18.53
KRH68628	Soybean	cytosol	23.99	18.28

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100788095	MapMan:35.2	EMBL:ACUP02002711	InterPro:DUF3444	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_04G196300	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K7KL66
EnsemblPlants:KRH63773	ProteinID:KRH63773	ProteinID:KRH63773.1	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44137	PANTHER:PTHR44137:SF4	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002339C22	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:46817482..46821862

Molecular Weight (calculated)

91785.2 Da

IEP (calculated)

8.676

GRAVY (calculated)

-0.782

Length

813 amino acids

Sequence
(BLAST)

001: MEFNKDGALR AKKLAEKMLL QREFGGARIL AKKALELYPN LDGLPQFLAT IEVYISSEDR VNGELDWYRI LGVQPLADEE TIRRQYRKLA LTLHPDKNRS
101: VGADGAFSLI SQAWSLLSDK AKRITYDQKC NLWRNGNPGG KPSMPASQNG SHSNIFNPVL LKPTFWTFCS FCKTNFEYHN VYVNSNLVCT CCHKPFLASE
201: TLPPPGYRNV SSTQMKQHNF NSMRMERNYH FSGRTPMSAV NSSLGSGPFS MPDGISRVPA SASSAAEAPG VFRMSSENLK RRHEDSATFL REDAHFGNAH
301: AVDRTGAGSA FQSSRFGSNS IMKGDRPRKN RPTDEHKVGS DRRDMENKTA SQNEGINLAN EFGSGRVNAA GNHKRTGVRD RSQHQIKNIL VEKARKEIVK
401: KLDEWKASSA SNNLDKSKNT DTEIREKGKE REGNVVKPGA QVVDSETVNK KCFSADLEPE LPGSLSMNVP DPDFHDFDGD RTENAFGENQ VWAAYDNDDG
501: MPRYYCLIHD VISKNPLNMR ISWLNAKSND ELAPIEWVSS GFPKTSGDFR IGKRVSYSTL NSFSHRVKWT KGSRGVVHIY PKKGDVWALY RNWSLDWNKF
601: TEDEIIQKYD MVEVLEDYCE EKGVNIAPLV KVSGFKTVFR QNADPRKVKN ISKAEMFRFS HQVPSHWLTG VEGHNAPKGC LELDPAATPM ELLQVLAEDL
701: EQVILMTTEK SVEDELKHKE NSREEGLIKM CQTTKDEGSD EGLGEKKRKS ESCLTTKKEG SDEGLGEKER KSESCLTTKE ERSDEELGEK ERKPKILFVY
801: KRRRLGEKRA VKC

Best Arabidopsis Sequence Match ( AT5G53150.1 )
(BLAST)

001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD

Arabidopsis Description

DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.