Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P11020_001 | |
| GSMUA_Achr4P16510_001 | |
| GSMUA_Achr8P34050_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P02570_001 | Banana | nucleus | 69.33 | 71.32 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 70.82 | 65.69 |
| GSMUA_Achr11P... | Banana | cytosol | 46.47 | 49.8 |
| GSMUA_Achr10P... | Banana | cytosol | 51.49 | 45.19 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 18.77 | 41.74 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 46.47 | 41.53 |
| Bra020958.1-P | Field mustard | cytosol | 7.81 | 41.18 |
| CDX76476 | Canola | cytosol | 7.81 | 41.18 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 19.14 | 40.87 |
| Os02t0510000-01 | Rice | cytosol | 54.28 | 39.78 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 53.35 | 39.15 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 53.35 | 39.15 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 53.53 | 39.08 |
| EES10633 | Sorghum | cytosol | 53.16 | 38.91 |
| OQU85000 | Sorghum | cytosol | 52.6 | 38.87 |
| KRG89459 | Soybean | cytosol | 7.81 | 38.53 |
| Zm00001d003948_P001 | Maize | cytosol | 52.6 | 38.45 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 50.19 | 38.24 |
| Zm00001d025238_P001 | Maize | cytosol | 52.04 | 38.15 |
| Os04t0388800-01 | Rice | nucleus | 42.19 | 37.96 |
| PGSC0003DMT400039473 | Potato | nucleus | 10.22 | 37.16 |
| Zm00001d050565_P001 | Maize | cytosol | 43.12 | 36.02 |
| KRH53452 | Soybean | cytosol | 45.17 | 35.12 |
| KRH64496 | Soybean | nucleus | 44.98 | 34.97 |
| Solyc03g019630.1.1 | Tomato | nucleus | 10.04 | 34.62 |
| Bra020957.1-P | Field mustard | cytosol | 13.01 | 33.98 |
| CDX76475 | Canola | cytosol | 12.83 | 33.5 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 10.78 | 33.33 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 50.0 | 32.93 |
| PGSC0003DMT400023514 | Potato | cytosol | 44.98 | 32.93 |
| CDX99361 | Canola | cytosol | 8.92 | 32.88 |
| CDX76474 | Canola | cytosol | 14.5 | 32.5 |
| CDX76994 | Canola | nucleus | 34.57 | 31.96 |
| Solyc03g007280.2.1 | Tomato | cytosol | 11.52 | 31.79 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 43.87 | 31.76 |
| KRH16532 | Soybean | cytosol | 44.98 | 31.43 |
| CDY12382 | Canola | nucleus | 21.38 | 31.42 |
| CDY27107 | Canola | nucleus | 21.19 | 31.15 |
| KRH18160 | Soybean | nucleus | 44.42 | 31.0 |
| CDY60890 | Canola | cytosol | 13.94 | 30.99 |
| PGSC0003DMT400059130 | Potato | cytosol | 44.61 | 30.85 |
| PGSC0003DMT400085016 | Potato | cytosol | 7.43 | 30.77 |
| KRH09248 | Soybean | nucleus | 44.42 | 30.68 |
| Bra038959.1-P | Field mustard | nucleus | 21.56 | 30.13 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 38.85 | 30.12 |
| Solyc01g044270.2.1 | Tomato | cytosol | 43.49 | 30.08 |
| Bra034258.1-P | Field mustard | cytosol | 34.57 | 30.05 |
| KRH38748 | Soybean | nucleus | 45.17 | 29.93 |
| CDY35353 | Canola | cytosol | 34.39 | 29.7 |
| PGSC0003DMT400092645 | Potato | cytosol | 7.06 | 29.46 |
| KRH73997 | Soybean | nucleus | 38.48 | 29.36 |
| Bra031906.1-P | Field mustard | cytosol | 5.02 | 29.35 |
| CDY31307 | Canola | cytosol | 5.02 | 29.35 |
| CDX76473 | Canola | cytosol | 13.2 | 29.34 |
| CDY09330 | Canola | cytosol | 12.27 | 29.33 |
| CDY19683 | Canola | cytosol | 37.73 | 29.29 |
| KRH14137 | Soybean | nucleus | 38.48 | 29.28 |
| CDY49460 | Canola | nucleus | 34.94 | 28.83 |
| AT5G37380.6 | Thale cress | nucleus | 23.05 | 28.77 |
| AT2G25560.1 | Thale cress | cytosol | 34.76 | 28.51 |
| Bra003079.1-P | Field mustard | cytosol | 37.55 | 28.49 |
| CDX99362 | Canola | nucleus | 14.87 | 28.07 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 45.91 | 27.88 |
| PGSC0003DMT400039476 | Potato | nucleus | 40.71 | 27.2 |
| KRH54176 | Soybean | nucleus | 39.78 | 26.99 |
| AT5G50115.1 | Thale cress | cytosol | 24.16 | 26.8 |
| KRH63773 | Soybean | nucleus | 39.96 | 26.45 |
| CDX74632 | Canola | cytosol | 28.81 | 26.41 |
| CDY47298 | Canola | cytosol | 28.62 | 26.37 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 10.78 | 26.36 |
| Bra007790.1-P | Field mustard | nucleus | 29.0 | 26.35 |
| CDY11521 | Canola | nucleus | 29.0 | 26.35 |
| CDX76752 | Canola | nucleus | 30.3 | 26.33 |
| PGSC0003DMT400015678 | Potato | nucleus | 38.29 | 26.14 |
| Solyc07g047690.1.1 | Tomato | nucleus | 38.1 | 26.02 |
| AT5G53150.3 | Thale cress | cytosol | 36.25 | 25.83 |
| Bra035378.1-P | Field mustard | cytosol | 32.9 | 25.73 |
| Bra013179.1-P | Field mustard | nucleus | 32.53 | 25.25 |
| CDX93081 | Canola | nucleus | 32.53 | 25.25 |
| Bra020955.1-P | Field mustard | cytosol | 13.2 | 25.18 |
| AT2G05230.1 | Thale cress | cytosol | 32.71 | 24.93 |
| AT2G05250.1 | Thale cress | cytosol | 32.71 | 24.93 |
| CDY15046 | Canola | nucleus | 31.97 | 24.93 |
| Solyc05g040050.1.1 | Tomato | nucleus | 36.25 | 24.9 |
| PGSC0003DMT400048481 | Potato | cytosol | 35.69 | 24.52 |
| CDX78942 | Canola | cytosol | 13.94 | 24.51 |
| CDY12569 | Canola | cytosol | 15.61 | 23.46 |
| CDX99360 | Canola | cytosol | 14.5 | 23.42 |
| Solyc03g019640.1.1 | Tomato | nucleus | 40.15 | 23.25 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 21.38 | 22.91 |
| AT5G35753.1 | Thale cress | cytosol | 18.03 | 22.61 |
| Bra040300.1-P | Field mustard | cytosol | 15.43 | 22.49 |
| Bra020956.1-P | Field mustard | nucleus | 14.5 | 22.35 |
| CDY60893 | Canola | cytosol | 6.51 | 22.01 |
| CDY60894 | Canola | cytosol | 6.51 | 22.01 |
| AT5G62780.1 | Thale cress | cytosol | 8.36 | 21.74 |
| GSMUA_Achr11P... | Banana | cytosol | 8.92 | 20.96 |
| AT4G19580.1 | Thale cress | cytosol | 12.08 | 20.83 |
| PGSC0003DMT400092668 | Potato | cytosol | 5.39 | 19.59 |
| Bra013403.1-P | Field mustard | nucleus | 19.52 | 19.37 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 7.81 | 19.27 |
| GSMUA_Achr11P... | Banana | nucleus | 23.23 | 19.11 |
| CDX78941 | Canola | nucleus | 19.52 | 19.02 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 25.28 | 17.57 |
| Bra013404.1-P | Field mustard | nucleus | 14.13 | 17.04 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 22.12 | 16.37 |
| AT4G19570.1 | Thale cress | nucleus | 16.91 | 16.31 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 6.69 | 15.65 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 6.69 | 14.63 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 7.62 | 14.39 |
| PGSC0003DMT400080343 | Potato | cytosol | 14.31 | 12.48 |
| PGSC0003DMT400096427 | Potato | cytosol | 14.13 | 12.36 |
| Solyc01g057750.1.1 | Tomato | cytosol | 13.94 | 12.1 |
| Solyc07g039220.1.1 | Tomato | cytosol | 7.81 | 11.9 |
| Solyc01g057650.1.1 | Tomato | cytosol | 2.6 | 8.19 |
| GSMUA_Achr11P... | Banana | cytosol | 0.74 | 2.42 |
| Bra002184.1-P | Field mustard | cytosol | 0.19 | 0.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P21160_001 | EnsemblPlants:GSMUA_Achr2T21160_001 | EnsemblPlantsGene:GSMUA_Achr2G21160_001 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF4 |
| PFAM:PF00226 | PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0002952799 | UniProt:M0S9V7 | MapMan:35.2 | : | : |
Description
Putative dnaJ domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G21160_001]
Coordinates
chr2:-:20751467..20756508
Molecular Weight (calculated)
61120.8 Da
IEP (calculated)
7.944
GRAVY (calculated)
-0.704
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCNREKALK ARETAERKFN AKDVKGAKKF ALKAQNLFPS LDGISQMIAT LDVYLAAEKR INGESDWYAI LSVNAFADEE TLRKHYRKLA LQLHPDKNKS
101: NKDHSSNNAS GPSAVSQSHT INLNTFWTSC KQCRMQYEYL RIYLNHNLLC PNCHQAFLAV EIGIPGNAAN SSIPWSAKQH QQNSNHNYTL KNGYSSGHQN
201: FQWSSFSGSA GTASTTDSAF QAANLNHKKF EKMKRKHEKA QAAAQREESF RTDGHIYKST IDESGNYNAG HTVSGYGRGR SISKNLHTNV QKTFSQINIR
301: QMLVEKAKAT VVEKLKEWNL AQTTKLGEKE KLKQKNGQEA KVLKLVSIDV PDPDFYDFDR DRQERTFEGD QVWATYDIRW DKGPRGVIRI VPKKGDTWAL
401: YRNWSPDWNE LTPDDVIYNY EMVEVLDDYN DEDGVSVIPL VKVAGFKAVF HRHMGLTEIK RISREEMFRF SHQVPSHLLT DEEAHNALKG CLELDPAATP
501: VELLQIITEV KEDLGMEANE QQSGNAVSFM QASLMMET
101: NKDHSSNNAS GPSAVSQSHT INLNTFWTSC KQCRMQYEYL RIYLNHNLLC PNCHQAFLAV EIGIPGNAAN SSIPWSAKQH QQNSNHNYTL KNGYSSGHQN
201: FQWSSFSGSA GTASTTDSAF QAANLNHKKF EKMKRKHEKA QAAAQREESF RTDGHIYKST IDESGNYNAG HTVSGYGRGR SISKNLHTNV QKTFSQINIR
301: QMLVEKAKAT VVEKLKEWNL AQTTKLGEKE KLKQKNGQEA KVLKLVSIDV PDPDFYDFDR DRQERTFEGD QVWATYDIRW DKGPRGVIRI VPKKGDTWAL
401: YRNWSPDWNE LTPDDVIYNY EMVEVLDDYN DEDGVSVIPL VKVAGFKAVF HRHMGLTEIK RISREEMFRF SHQVPSHLLT DEEAHNALKG CLELDPAATP
501: VELLQIITEV KEDLGMEANE QQSGNAVSFM QASLMMET
001: MEAYREEALR VKQIAERRFA EKDFTSARSY ALKAKSLFPD LEGLSQMVAT FEVYLASQTR SGGQIDYYAV LGLKPSAGKR EVKKQYKKMA VLLHPDKNKC
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN
Arabidopsis Description
At2g05250/F5G3.15 [Source:UniProtKB/TrEMBL;Acc:Q9S7L6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.