Factsheet for Solyc07g039220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400086295	Potato	mitochondrion	27.2	44.04
Solyc01g067770.1.1	Tomato	extracellular, vacuole	32.86	42.49
Solyc01g057650.1.1	Tomato	cytosol	19.55	40.35
PGSC0003DMT400094007	Potato	extracellular, plasma membrane	32.29	40.0
PGSC0003DMT400085016	Potato	cytosol	14.45	39.23
Solyc01g057750.1.1	Tomato	cytosol	62.32	35.48
PGSC0003DMT400092668	Potato	cytosol	12.75	30.41
Solyc01g067780.1.1	Tomato	cytosol	61.19	23.92
Solyc01g098340.2.1	Tomato	cytosol	37.39	16.5
Solyc01g057670.1.1	Tomato	mitochondrion	6.52	16.43
Solyc10g007630.1.1	Tomato	cytosol	20.96	15.23
Solyc01g098310.1.1	Tomato	cytosol	17.85	13.82
Solyc01g098250.2.1	Tomato	nucleus	35.98	12.79
Solyc01g098330.1.1	Tomato	nucleus	12.75	10.98
GSMUA_Achr8P00660_001	Banana	cytosol	18.7	10.96
Os04t0388800-01	Rice	nucleus	17.28	10.2
Solyc08g029220.1.1	Tomato	nucleus	21.81	9.76
EES07899	Sorghum	cytosol	20.11	9.66
Zm00001d025584_P001	Maize	cytosol	19.26	9.28
Zm00001d025585_P001	Maize	cytosol	19.26	9.28
Zm00001d050565_P001	Maize	cytosol	16.71	9.16
EES10933	Sorghum	cytosol	18.7	9.12
Os03t0401200-01	Rice	cytosol	19.26	9.09
TraesCS3B01G607500.1	Wheat	cytosol	18.98	9.03
GSMUA_Achr3P02570_001	Banana	nucleus	13.31	8.99
TraesCS3A01G536400.1	Wheat	cytosol	18.7	8.89
TraesCS3D01G541800.1	Wheat	cytosol	18.7	8.85
GSMUA_Achr11P...	Banana	cytosol	12.46	8.76
TraesCS4D01G315600.1	Wheat	cytosol	18.41	8.54
Os02t0510000-01	Rice	cytosol	17.56	8.45
Zm00001d003948_P001	Maize	cytosol	17.56	8.42
TraesCS5A01G493100.1	Wheat	cytosol	18.13	8.41
TraesCS2D01G283100.2	Wheat	cytosol	17.28	8.32
TraesCS2A01G284200.2	Wheat	cytosol	17.28	8.32
TraesCS2B01G301100.1	Wheat	cytosol	16.43	8.22
Solyc05g040050.1.1	Tomato	nucleus	18.13	8.17
EES10633	Sorghum	cytosol	17.0	8.16
TraesCS3B01G470100.1	Wheat	nucleus	16.71	8.13
OQU85000	Sorghum	cytosol	16.71	8.1
Os01t0923800-01	Rice	nucleus	17.0	8.06
Zm00001d025238_P001	Maize	cytosol	16.71	8.04
Solyc07g047690.1.1	Tomato	nucleus	17.85	7.99
GSMUA_Achr2P21160_001	Banana	cytosol	11.9	7.81
TraesCS3A01G435100.1	Wheat	nucleus	17.28	7.71
GSMUA_Achr6P12230_001	Banana	nucleus	12.46	7.59
Solyc03g019640.1.1	Tomato	nucleus	19.83	7.53
Solyc01g044270.2.1	Tomato	cytosol	16.43	7.46
Zm00001d011997_P001	Maize	nucleus	17.28	7.42
GSMUA_Achr10P...	Banana	cytosol	12.75	7.34
KXG34016	Sorghum	nucleus	16.43	7.0
Solyc08g005300.1.1	Tomato	nucleus	17.56	6.8
TraesCS4B01G319100.1	Wheat	cytosol	12.18	6.04
Solyc01g065570.2.1	Tomato	cytosol	2.55	3.78
KRG89459	Soybean	cytosol	0.57	1.83
Solyc03g007280.2.1	Tomato	cytosol	0.57	1.03
Solyc03g019630.1.1	Tomato	nucleus	0.0	0.0
CDY09330	Canola	cytosol	0.0	0.0
CDX76473	Canola	cytosol	0.0	0.0
Bra020955.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc07g039220.1.1	EnsemblPlantsGene:Solyc07g039220.1	InterPro:DUF3444	PANTHER:PTHR45089	PFAM:PF11926	SEG:seg
UniParc:UPI000276B427	UniProt:K4CDP8	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr7:-:45783363..45784796

Molecular Weight (calculated)

41093.7 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.248

Length

353 amino acids

Sequence
(BLAST)

001: MAMSETFEYE DAHISVFDKE TEETCFKVGH VWAVYDTMDV IPRFYPVIRK ILSPSLKLCI KWLEPEPLNE DETKWLSEGF PSSCGRFRLG NSEDLDDHPM
101: FSRLVLSGYG DSISVHVAYL NKVKGFTCLF HRGKRLISSP AKDMFRFSHR IPSIKMTGME KDGIPEGSCE LDHASLTTER INISSPSIDQ REVPEPVFYR
201: FATEGSPEIF QIGQYWEICS KEDVFPRYND LLKKINLLPE FVLHVTWFYE QNVKRGVYKI IPLKGEVWAV YKNWISQLKD LRFLQWVKGL KSVYKPKVEE
301: EEADKVVKIS ISQHLRFSHL ITAFLLTEKR GRCLRGFFVL DPVGMPLYLM FTD

Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)

001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.