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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085685 Potato plastid 72.14 59.06
PGSC0003DMT400097263 Potato cytosol 42.86 41.38
PGSC0003DMT400094974 Potato cytosol 77.14 39.56
PGSC0003DMT400092747 Potato cytosol 52.86 30.08
Solyc10g007630.1.1 Tomato cytosol 27.86 8.02
Solyc01g098310.1.1 Tomato cytosol 25.0 7.68
Solyc01g098330.1.1 Tomato nucleus 20.0 6.83
Solyc07g039220.1.1 Tomato cytosol 16.43 6.52
Solyc05g040050.1.1 Tomato nucleus 30.71 5.49
Solyc07g047690.1.1 Tomato nucleus 30.71 5.46
Solyc08g029220.1.1 Tomato nucleus 30.71 5.45
Solyc01g098340.2.1 Tomato cytosol 30.71 5.38
Solyc01g057750.1.1 Tomato cytosol 23.57 5.32
Solyc01g044270.2.1 Tomato cytosol 28.57 5.14
Solyc03g019640.1.1 Tomato nucleus 30.71 4.63
Solyc08g005300.1.1 Tomato nucleus 30.0 4.61
Solyc01g098250.2.1 Tomato nucleus 30.71 4.33
Solyc01g067780.1.1 Tomato cytosol 26.43 4.1
Solyc01g057650.1.1 Tomato cytosol 4.29 3.51
Solyc01g067770.1.1 Tomato extracellular, vacuole 4.29 2.2
Solyc01g065570.2.1 Tomato cytosol 3.57 2.1
Solyc03g007280.2.1 Tomato cytosol 0.0 0.0
Solyc03g019630.1.1 Tomato nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc01g057670.1.1EnsemblPlantsGene:Solyc01g057670.1InterPro:DUF3444PANTHER:PTHR10825PANTHER:PTHR10825:SF4PFAM:PF11926
UniParc:UPI0002761D1FUniProt:K4AVX8MapMan:35.2:::
Description
No Description!
Coordinates
chr1:+:63393106..63393528
Molecular Weight (calculated)
16421.1 Da
IEP (calculated)
9.515
GRAVY (calculated)
-0.136
Length
140 amino acids
Sequence
(BLAST)
001: MPIGCGLFKF LNRKLNKYLV TNNFLHVVVA KPVKKGVYKI FPKTGEVWAL YKNVSAHLMK GNNLEDFEYV IVEIVDVPYD YVDVKFLEWV KGFKFVYKDR
101: VEEEKADKAV KICVSEHLRF SHQIPTFRLI EERDGSLRGF
Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)
001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.