Factsheet for Solyc03g019630.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039473	Potato	nucleus	82.05	86.49
CDX76476	Canola	cytosol	34.62	52.94
Bra020958.1-P	Field mustard	cytosol	34.62	52.94
Bra031906.1-P	Field mustard	cytosol	29.49	50.0
CDY31307	Canola	cytosol	29.49	50.0
Solyc03g007280.2.1	Tomato	cytosol	53.21	42.56
KRG89459	Soybean	cytosol	28.21	40.37
Bra020957.1-P	Field mustard	cytosol	45.51	34.47
CDX76475	Canola	cytosol	45.51	34.47
CDY60891	Canola	cytosol, mitochondrion, nucleus	37.82	33.91
CDX99362	Canola	nucleus	50.0	27.37
CDY60010	Canola	cytosol, mitochondrion, nucleus	38.46	27.27
CDX76474	Canola	cytosol	41.67	27.08
CDY60890	Canola	cytosol	39.1	25.21
CDX78942	Canola	cytosol	48.08	24.51
CDY60893	Canola	cytosol	23.72	23.27
CDY60894	Canola	cytosol	23.72	23.27
CDX99360	Canola	cytosol	48.72	22.82
AT4G19580.1	Thale cress	cytosol	44.23	22.12
Bra020956.1-P	Field mustard	nucleus	48.72	21.78
Bra040300.1-P	Field mustard	cytosol	42.95	18.16
CDY12569	Canola	cytosol	41.67	18.16
Bra013404.1-P	Field mustard	nucleus	48.08	16.82
AT5G62780.1	Thale cress	cytosol	19.23	14.49
Bra013403.1-P	Field mustard	nucleus	48.72	14.02
CDX78941	Canola	nucleus	48.72	13.77
GSMUA_Achr8P00660_001	Banana	cytosol	49.36	12.79
Solyc01g065570.2.1	Tomato	cytosol	19.23	12.61
AT4G19570.1	Thale cress	nucleus	44.87	12.54
GSMUA_Achr10P...	Banana	cytosol	48.72	12.4
Solyc03g019640.1.1	Tomato	nucleus	71.15	11.95
Os03t0401200-01	Rice	cytosol	49.36	10.29
TraesCS3D01G541800.1	Wheat	cytosol	48.72	10.19
GSMUA_Achr11P...	Banana	cytosol	32.69	10.16
TraesCS4B01G319100.1	Wheat	cytosol	46.15	10.11
TraesCS3A01G536400.1	Wheat	cytosol	48.08	10.11
TraesCS3B01G607500.1	Wheat	cytosol	48.08	10.11
GSMUA_Achr2P21160_001	Banana	cytosol	34.62	10.04
Zm00001d025585_P001	Maize	cytosol	46.79	9.96
Zm00001d025584_P001	Maize	cytosol	46.15	9.82
TraesCS4D01G315600.1	Wheat	cytosol	47.44	9.72
TraesCS5A01G493100.1	Wheat	cytosol	47.44	9.72
EES10933	Sorghum	cytosol	44.87	9.67
EES10633	Sorghum	cytosol	45.51	9.66
Zm00001d003948_P001	Maize	cytosol	45.51	9.65
TraesCS2A01G284200.2	Wheat	cytosol	44.87	9.55
Zm00001d025238_P001	Maize	cytosol	44.87	9.54
Os02t0510000-01	Rice	cytosol	44.87	9.54
EES07899	Sorghum	cytosol	44.87	9.52
Solyc01g044270.2.1	Tomato	cytosol	47.44	9.51
TraesCS2B01G301100.1	Wheat	cytosol	42.95	9.49
TraesCS2D01G283100.2	Wheat	cytosol	44.23	9.41
TraesCS3B01G470100.1	Wheat	nucleus	43.59	9.37
OQU85000	Sorghum	cytosol	42.95	9.2
GSMUA_Achr6P12230_001	Banana	nucleus	33.33	8.97
Solyc07g047690.1.1	Tomato	nucleus	44.87	8.88
Os01t0923800-01	Rice	nucleus	42.31	8.87
TraesCS3A01G435100.1	Wheat	nucleus	44.23	8.72
Solyc05g040050.1.1	Tomato	nucleus	43.59	8.68
KXG34016	Sorghum	nucleus	44.23	8.32
Solyc08g029220.1.1	Tomato	nucleus	41.67	8.24
Zm00001d011997_P001	Maize	nucleus	42.95	8.15
GSMUA_Achr3P02570_001	Banana	nucleus	26.92	8.03
Solyc01g067780.1.1	Tomato	cytosol	41.03	7.09
Solyc01g098250.2.1	Tomato	nucleus	43.59	6.85
Solyc10g007630.1.1	Tomato	cytosol	19.23	6.17
Zm00001d050565_P001	Maize	cytosol	23.08	5.59
Solyc08g005300.1.1	Tomato	nucleus	30.13	5.15
Solyc01g098310.1.1	Tomato	cytosol	12.82	4.39
Solyc01g057750.1.1	Tomato	cytosol	8.33	2.1
Solyc01g067770.1.1	Tomato	extracellular, vacuole	1.92	1.1
Solyc01g098330.1.1	Tomato	nucleus	2.56	0.98
Solyc01g098340.2.1	Tomato	cytosol	3.85	0.75
Os04t0388800-01	Rice	nucleus	1.28	0.33
AT5G35753.1	Thale cress	cytosol	0.64	0.23
Solyc07g039220.1.1	Tomato	cytosol	0.0	0.0
Solyc01g057670.1.1	Tomato	mitochondrion	0.0	0.0
Solyc01g057650.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g019630.1.1	EnsemblPlantsGene:Solyc03g019630.1	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR44137	PANTHER:PTHR44137:SF5	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000276870E	UniProt:K4BET5	MapMan:35.2	:

Description

No Description!

Coordinates

chr3:+:61495951..61496421

Molecular Weight (calculated)

17406.8 Da

IEP (calculated)

10.039

GRAVY (calculated)

-0.762

Length

156 amino acids

Sequence
(BLAST)

001: MECNRDEAIR AKGIAEQKLM ENDISGAHKF ALKAQKMYPG LDGLSQFMEV VNVYVAHEKK TRGEVDLYGV LALDPSADDE AVRKQYKKLA LALHPDKNKS
101: VGADGAFKIV SEAWSVLYDR SKRAMTEKKR ATTNEGVKKP TTTYSRKKKK GESSSH

Best Arabidopsis Sequence Match ( AT5G37380.8 )
(BLAST)

001: MECNKDEATR AKEIAENKFK MKDIAGAKKF ALKAQNLYPE IEGVSQMLAT LDVYIAAENK VNEDVDWYGI LNASPRDDDE TLKRKYRKLA LMLHPDKNKS
101: IGAEGAFKHV SEAWKFLSDK EKRAAYDRRK SLHSVYQKVS VSSSNNGFCN FAKTTFTTNA RTTTPRNNPP AQKTNPPAQK TNPPAQKTNP PAQKNNPPTQ
201: KNNPQKPVGT TQKTGRTDNH TTTPNSFTAS GSSDQSKSNT FWTVCRRCMM QYEYLRVYVN CNLRCPNCLQ SYLAVEVPKP GISSRWSSCS RLKSAANHNT
301: TSGLFNNSKW TFSRTSSAAH AASVVQHAYE KVKKDREQAK ATARREKKNA KRKSTTDSSA SGSSLKKRKV CLETDIGCSS GREVTYRVTG ENGKNMGKLE
401: HGTKESADKL SLRRTQRKIS KENVTREVKS R

Arabidopsis Description

At5g37380/MNJ8_170 [Source:UniProtKB/TrEMBL;Acc:Q9FHS7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.