Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G283100.2 | Wheat | cytosol | 99.43 | 95.77 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 99.29 | 95.63 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 98.73 | 94.57 |
| Os04t0388800-01 | Rice | nucleus | 68.98 | 81.44 |
| EES10633 | Sorghum | cytosol | 83.85 | 80.54 |
| Zm00001d025238_P001 | Maize | cytosol | 82.72 | 79.56 |
| Zm00001d003948_P001 | Maize | cytosol | 82.44 | 79.08 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 19.12 | 53.57 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 17.28 | 50.41 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 38.24 | 50.19 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 40.79 | 49.66 |
| Bra020958.1-P | Field mustard | cytosol | 7.08 | 49.02 |
| CDX76476 | Canola | cytosol | 7.08 | 49.02 |
| KRG89459 | Soybean | cytosol | 7.51 | 48.62 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 35.41 | 47.8 |
| Bra031906.1-P | Field mustard | cytosol | 6.09 | 46.74 |
| CDY31307 | Canola | cytosol | 6.09 | 46.74 |
| PGSC0003DMT400039473 | Potato | nucleus | 9.63 | 45.95 |
| KRH53452 | Soybean | cytosol | 43.34 | 44.22 |
| CDX99361 | Canola | cytosol | 9.07 | 43.84 |
| KRH64496 | Soybean | nucleus | 42.63 | 43.5 |
| Solyc03g019630.1.1 | Tomato | nucleus | 9.49 | 42.95 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 10.34 | 41.95 |
| Bra020957.1-P | Field mustard | cytosol | 11.9 | 40.78 |
| CDX76475 | Canola | cytosol | 11.9 | 40.78 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 46.18 | 39.9 |
| Solyc03g007280.2.1 | Tomato | cytosol | 10.91 | 39.49 |
| Bra034258.1-P | Field mustard | cytosol | 34.14 | 38.93 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 40.79 | 38.76 |
| PGSC0003DMT400023514 | Potato | cytosol | 40.09 | 38.5 |
| CDX76994 | Canola | nucleus | 31.73 | 38.49 |
| KRH18160 | Soybean | nucleus | 41.93 | 38.39 |
| CDY35353 | Canola | cytosol | 33.43 | 37.88 |
| KRH16532 | Soybean | cytosol | 41.22 | 37.79 |
| PGSC0003DMT400059130 | Potato | cytosol | 41.22 | 37.4 |
| KRH09248 | Soybean | nucleus | 40.93 | 37.1 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 36.4 | 37.03 |
| Solyc01g044270.2.1 | Tomato | cytosol | 40.79 | 37.02 |
| KRH14137 | Soybean | nucleus | 36.69 | 36.63 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 38.39 | 36.52 |
| CDY49460 | Canola | nucleus | 33.71 | 36.5 |
| CDY19683 | Canola | cytosol | 35.69 | 36.36 |
| KRH73997 | Soybean | nucleus | 36.26 | 36.31 |
| AT2G25560.1 | Thale cress | cytosol | 33.71 | 36.28 |
| KRH38748 | Soybean | nucleus | 41.36 | 35.96 |
| Bra003079.1-P | Field mustard | cytosol | 35.84 | 35.68 |
| CDY27107 | Canola | nucleus | 18.41 | 35.52 |
| CDY12382 | Canola | nucleus | 18.13 | 34.97 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 35.13 | 34.83 |
| CDX76474 | Canola | cytosol | 11.76 | 34.58 |
| CDY09330 | Canola | cytosol | 10.91 | 34.22 |
| CDX99362 | Canola | nucleus | 13.74 | 34.04 |
| Bra038959.1-P | Field mustard | nucleus | 18.56 | 34.03 |
| CDX76473 | Canola | cytosol | 11.61 | 33.88 |
| Bra035378.1-P | Field mustard | cytosol | 32.44 | 33.28 |
| CDY60890 | Canola | cytosol | 11.33 | 33.06 |
| CDX74632 | Canola | cytosol | 27.48 | 33.05 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 41.36 | 32.96 |
| Bra007790.1-P | Field mustard | nucleus | 27.62 | 32.94 |
| CDY11521 | Canola | nucleus | 27.62 | 32.94 |
| PGSC0003DMT400039476 | Potato | nucleus | 37.54 | 32.92 |
| KRH54176 | Soybean | nucleus | 36.97 | 32.91 |
| CDY47298 | Canola | cytosol | 27.05 | 32.71 |
| CDY60893 | Canola | cytosol | 7.37 | 32.7 |
| CDY60894 | Canola | cytosol | 7.37 | 32.7 |
| CDX76752 | Canola | nucleus | 28.61 | 32.63 |
| PGSC0003DMT400015678 | Potato | nucleus | 35.98 | 32.23 |
| KRH63773 | Soybean | nucleus | 37.11 | 32.23 |
| PGSC0003DMT400048481 | Potato | cytosol | 35.69 | 32.18 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 33.0 | 32.09 |
| Solyc07g047690.1.1 | Tomato | nucleus | 35.69 | 31.98 |
| CDY15046 | Canola | nucleus | 31.16 | 31.88 |
| Solyc05g040050.1.1 | Tomato | nucleus | 35.27 | 31.8 |
| Bra013179.1-P | Field mustard | nucleus | 31.16 | 31.75 |
| CDX93081 | Canola | nucleus | 31.16 | 31.75 |
| AT2G05230.1 | Thale cress | cytosol | 31.59 | 31.59 |
| AT2G05250.1 | Thale cress | cytosol | 31.59 | 31.59 |
| AT5G35753.1 | Thale cress | cytosol | 19.12 | 31.47 |
| AT5G53150.3 | Thale cress | cytosol | 33.57 | 31.39 |
| CDX78942 | Canola | cytosol | 13.46 | 31.05 |
| AT5G37380.6 | Thale cress | nucleus | 18.7 | 30.63 |
| CDX99360 | Canola | cytosol | 14.02 | 29.73 |
| AT5G50115.1 | Thale cress | cytosol | 20.4 | 29.69 |
| Bra020955.1-P | Field mustard | cytosol | 11.76 | 29.43 |
| PGSC0003DMT400085016 | Potato | cytosol | 5.38 | 29.23 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 9.07 | 29.09 |
| Solyc03g019640.1.1 | Tomato | nucleus | 37.39 | 28.42 |
| Bra020956.1-P | Field mustard | nucleus | 13.74 | 27.79 |
| CDY12569 | Canola | cytosol | 13.88 | 27.37 |
| Bra040300.1-P | Field mustard | cytosol | 14.16 | 27.1 |
| AT4G19580.1 | Thale cress | cytosol | 11.33 | 25.64 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 7.37 | 23.85 |
| AT5G62780.1 | Thale cress | cytosol | 6.8 | 23.19 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.38 | 22.22 |
| Bra013403.1-P | Field mustard | nucleus | 16.71 | 21.77 |
| PGSC0003DMT400092645 | Potato | cytosol | 3.97 | 21.71 |
| CDX78941 | Canola | nucleus | 16.57 | 21.2 |
| Bra013404.1-P | Field mustard | nucleus | 13.31 | 21.08 |
| AT4G19570.1 | Thale cress | nucleus | 15.86 | 20.07 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 7.79 | 20.0 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 7.79 | 19.3 |
| PGSC0003DMT400092668 | Potato | cytosol | 3.97 | 18.92 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 23.23 | 18.3 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 24.08 | 16.44 |
| Solyc07g039220.1.1 | Tomato | cytosol | 8.22 | 16.43 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 22.66 | 16.39 |
| Solyc01g057750.1.1 | Tomato | cytosol | 13.6 | 15.48 |
| PGSC0003DMT400080343 | Potato | cytosol | 13.31 | 15.23 |
| PGSC0003DMT400096427 | Potato | cytosol | 13.03 | 14.96 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 23.23 | 14.95 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 23.8 | 14.09 |
| TraesCS3B01G475500.1 | Wheat | cytosol | 15.01 | 14.08 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 14.59 | 11.92 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 15.01 | 11.53 |
| Bra002184.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G301100.1 | EnsemblPlantsGene:TraesCS2B01G301100 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF3 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:423835412..423837613
Molecular Weight (calculated)
79093.2 Da
IEP (calculated)
8.740
GRAVY (calculated)
-0.721
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVEYNMDEA LKARNTAESK FHARDLRGAR KYAVKAQNLC PSLEGISQMA STLEVHLAAE SKIDGESDWY RILSLPAFAD EEDVKKQYRK LALQLHPDKN
101: KSVGAEEAFK LISEAWSVLS DTSRKTIYDQ KRSDHSVVNV TNGMYTYDKK ATKRARKNAA AAAAAAAAAA AAAEATARPA GVDTFWTSCN RCRMQYEYLR
201: MYLNHNLLCP NCHHAFMAVE TGFPCNGSSS SFSWSTKQQP QNHSSTKHSY GSTSRTSSIP GTGHVGYQQD STYDSYNSQS FQWNQYSKTA PAADTNAYST
301: QASEKPRRNE ESYSYNYPES GNTCDPERTT SRRGRFAKRR RHSNDYTTVD YAGDNKETVV VSTETNAFTD VGRVNGTSVE KMRSAVSVRR ANVLREISQI
401: DTRGLLVEKA KEAVRGKLQE LSMAACSRFA EKRKSEGKVY PSDNNIKANG VLSGKPGKGL KLCSSISVDT HIPATATDEK NPEQKRVPVS IDVPDPDFHD
501: FDKDRTERAF YSDQVWATYD SEDGMPRLYA MVQKVLSMRP FRIRMSFLNS KSNIELSPIN WVASGFQKTC GDFRVGRYQI TETVNIFSHK VSWTKGPRGI
601: IRIIPQKGDT WALYRDWSPD WNELTPDDVA GFKAVFHRHM DPKEVRRIPK GELFRFSHQV PSRLLTGEEG NNAPEGCHEL DPAATPVDLL KVITEVNEDV
701: AAQTAE
101: KSVGAEEAFK LISEAWSVLS DTSRKTIYDQ KRSDHSVVNV TNGMYTYDKK ATKRARKNAA AAAAAAAAAA AAAEATARPA GVDTFWTSCN RCRMQYEYLR
201: MYLNHNLLCP NCHHAFMAVE TGFPCNGSSS SFSWSTKQQP QNHSSTKHSY GSTSRTSSIP GTGHVGYQQD STYDSYNSQS FQWNQYSKTA PAADTNAYST
301: QASEKPRRNE ESYSYNYPES GNTCDPERTT SRRGRFAKRR RHSNDYTTVD YAGDNKETVV VSTETNAFTD VGRVNGTSVE KMRSAVSVRR ANVLREISQI
401: DTRGLLVEKA KEAVRGKLQE LSMAACSRFA EKRKSEGKVY PSDNNIKANG VLSGKPGKGL KLCSSISVDT HIPATATDEK NPEQKRVPVS IDVPDPDFHD
501: FDKDRTERAF YSDQVWATYD SEDGMPRLYA MVQKVLSMRP FRIRMSFLNS KSNIELSPIN WVASGFQKTC GDFRVGRYQI TETVNIFSHK VSWTKGPRGI
601: IRIIPQKGDT WALYRDWSPD WNELTPDDVA GFKAVFHRHM DPKEVRRIPK GELFRFSHQV PSRLLTGEEG NNAPEGCHEL DPAATPVDLL KVITEVNEDV
701: AAQTAE
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGSR HPYVQALLRS DIKKALMDRG QSEIFKRLPM MIAKMEGKVN
401: PTEGEKNSTK AMSSKASEVE RSKMSSTANE VERSVEVIPH ESDEVKEIVV PDSDFHNFDL DRSESAFKDD QIWAAYDDAD GMPRFYARIQ KVISVNPFKL
501: KISWLNSKTT SEFGPIDWMG AGFAKSCGDF RCGRYESTDT LNAFSHSVDF TKGARGLLHI LPKKGQVWAL YRNWSPEWDK NTPDEVKHKY EMVEVLDDYT
601: EDDQSLTVAL LLKAEGFRVV FRRCTEKLGV RKIAKEEMLR FSHQVPHYIL TGKEADNAPE GFLELDPAAT PCAFSSENAE ADEKSEAVKE NEQGEAVKEN
701: EESEALKENE ESEAVKENEE VGMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.