Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 1
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400086295 | Potato | mitochondrion | 57.19 | 74.77 |
| PGSC0003DMT400085016 | Potato | cytosol | 33.33 | 73.08 |
| PGSC0003DMT400086601 | Potato | cytosol | 50.18 | 71.14 |
| PGSC0003DMT400092668 | Potato | cytosol | 34.04 | 65.54 |
| PGSC0003DMT400057888 | Potato | cytosol | 27.37 | 39.39 |
| Solyc07g039220.1.1 | Tomato | cytosol | 40.0 | 32.29 |
| PGSC0003DMT400089411 | Potato | cytosol | 24.21 | 30.8 |
| PGSC0003DMT400096427 | Potato | cytosol | 52.63 | 24.39 |
| PGSC0003DMT400080343 | Potato | cytosol | 52.63 | 24.31 |
| PGSC0003DMT400092645 | Potato | cytosol | 10.53 | 23.26 |
| PGSC0003DMT400094016 | Potato | nucleus | 22.81 | 22.18 |
| PGSC0003DMT400085685 | Potato | plastid | 12.63 | 21.05 |
| PGSC0003DMT400097263 | Potato | cytosol | 10.53 | 20.69 |
| PGSC0003DMT400058788 | Potato | nucleus | 32.98 | 19.22 |
| PGSC0003DMT400058792 | Potato | nucleus | 58.6 | 18.21 |
| PGSC0003DMT400057894 | Potato | cytosol | 23.51 | 17.27 |
| PGSC0003DMT400094974 | Potato | cytosol | 16.14 | 16.85 |
| PGSC0003DMT400057893 | Potato | cytosol | 25.96 | 15.29 |
| PGSC0003DMT400092747 | Potato | cytosol | 11.58 | 13.41 |
| PGSC0003DMT400054841 | Potato | cytosol | 22.46 | 12.96 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 24.21 | 11.46 |
| PGSC0003DMT400057887 | Potato | cytosol | 31.23 | 10.57 |
| Os04t0388800-01 | Rice | nucleus | 21.75 | 10.37 |
| PGSC0003DMT400038431 | Potato | nucleus | 26.32 | 9.53 |
| EES07899 | Sorghum | cytosol | 24.21 | 9.39 |
| GSMUA_Achr11P... | Banana | cytosol | 16.14 | 9.16 |
| Zm00001d050565_P001 | Maize | cytosol | 20.7 | 9.16 |
| Zm00001d025585_P001 | Maize | cytosol | 23.51 | 9.14 |
| Zm00001d025584_P001 | Maize | cytosol | 23.51 | 9.14 |
| EES10933 | Sorghum | cytosol | 23.16 | 9.12 |
| Os02t0510000-01 | Rice | cytosol | 22.46 | 8.72 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 22.46 | 8.63 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 22.11 | 8.59 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 22.11 | 8.59 |
| Os03t0401200-01 | Rice | cytosol | 22.46 | 8.56 |
| TraesCS3A01G536400.1 | Wheat | cytosol | 22.11 | 8.49 |
| PGSC0003DMT400057904 | Potato | nucleus | 31.93 | 8.42 |
| TraesCS5A01G493100.1 | Wheat | cytosol | 22.46 | 8.41 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 21.75 | 8.31 |
| OQU85000 | Sorghum | cytosol | 21.05 | 8.24 |
| PGSC0003DMT400039476 | Potato | nucleus | 23.16 | 8.2 |
| Zm00001d003948_P001 | Maize | cytosol | 21.05 | 8.15 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 21.75 | 8.15 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 20.7 | 8.13 |
| PGSC0003DMT400015678 | Potato | nucleus | 22.46 | 8.12 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 14.74 | 8.03 |
| EES10633 | Sorghum | cytosol | 20.7 | 8.03 |
| Os01t0923800-01 | Rice | nucleus | 20.7 | 7.93 |
| Zm00001d025238_P001 | Maize | cytosol | 20.35 | 7.9 |
| GSMUA_Achr10P... | Banana | cytosol | 16.84 | 7.83 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 19.3 | 7.79 |
| PGSC0003DMT400023514 | Potato | cytosol | 20.0 | 7.76 |
| PGSC0003DMT400059130 | Potato | cytosol | 21.05 | 7.71 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 14.39 | 7.62 |
| PGSC0003DMT400048481 | Potato | cytosol | 20.7 | 7.54 |
| TraesCS3A01G435100.1 | Wheat | nucleus | 20.7 | 7.46 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 14.39 | 7.07 |
| Zm00001d011997_P001 | Maize | nucleus | 19.65 | 6.81 |
| KXG34016 | Sorghum | nucleus | 19.65 | 6.76 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 15.09 | 6.04 |
| PGSC0003DMT400047612 | Potato | nucleus | 18.95 | 5.89 |
| PGSC0003DMT400003010 | Potato | nucleus | 3.86 | 4.33 |
| KRG89459 | Soybean | cytosol | 0.35 | 0.92 |
| CDX76473 | Canola | cytosol | 0.0 | 0.0 |
| CDY09330 | Canola | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400039473 | Potato | nucleus | 0.0 | 0.0 |
| Bra020955.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400094007 | EnsemblPlantsGene:PGSC0003DMG400043578 | InterPro:DUF3444 | PFAM:PF11926 | PGSC:PGSC0003DMG400043578 | SignalP:SignalP-noTM |
| UniParc:UPI0002955E83 | UniProt:M1DT67 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400043578]
Coordinates
chr1:+:59638644..59639501
Molecular Weight (calculated)
32498.6 Da
IEP (calculated)
4.657
GRAVY (calculated)
-0.185
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRFYAIIRK ILSLAFKLCI TLLELEPLSE DETKWLFEEF LASCSRYRLG TSEAIKDLPM FSHLACSMNG NNCYAIKIFP LEGETWPLSK DWDMNCYPHL
101: GSNKNFNYEF IEVLSNYVDS IGVHVAYLFK AKGFACLFHR AGDPFLVPTK DMFRFYHRIP SMKMIGMERY DVPEGSFELN PSSLTTDQVG ISSSSIDQRA
201: TTHLMDSINF AENCVSSVPN QVRPEPEFYR FGVEGSFELD LASLPTYQVD ISASSIDQRE PSNFMDYVNS AENWIASVPN KVPEP
101: GSNKNFNYEF IEVLSNYVDS IGVHVAYLFK AKGFACLFHR AGDPFLVPTK DMFRFYHRIP SMKMIGMERY DVPEGSFELN PSSLTTDQVG ISSSSIDQRA
201: TTHLMDSINF AENCVSSVPN QVRPEPEFYR FGVEGSFELD LASLPTYQVD ISASSIDQRE PSNFMDYVNS AENWIASVPN KVPEP
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.