Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G301100.1 | Wheat | cytosol | 95.77 | 99.43 |
| TraesCS2A01G284200.2 | Wheat | cytosol | 99.32 | 99.32 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 98.77 | 98.24 |
| Os04t0388800-01 | Rice | nucleus | 69.85 | 85.62 |
| EES10633 | Sorghum | cytosol | 84.45 | 84.22 |
| Zm00001d025238_P001 | Maize | cytosol | 83.36 | 83.24 |
| Zm00001d003948_P001 | Maize | cytosol | 82.95 | 82.61 |
| VIT_17s0000g01140.t01 | Wine grape | cytosol | 20.46 | 59.52 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 39.15 | 53.35 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 41.75 | 52.76 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 36.43 | 51.05 |
| VIT_01s0010g03770.t01 | Wine grape | cytosol | 16.64 | 50.41 |
| Bra020958.1-P | Field mustard | cytosol | 6.82 | 49.02 |
| CDX76476 | Canola | cytosol | 6.82 | 49.02 |
| KRG89459 | Soybean | cytosol | 7.23 | 48.62 |
| KRH53452 | Soybean | cytosol | 44.2 | 46.82 |
| Bra031906.1-P | Field mustard | cytosol | 5.87 | 46.74 |
| CDY31307 | Canola | cytosol | 5.87 | 46.74 |
| KRH64496 | Soybean | nucleus | 43.52 | 46.1 |
| PGSC0003DMT400039473 | Potato | nucleus | 9.28 | 45.95 |
| Solyc03g019630.1.1 | Tomato | nucleus | 9.41 | 44.23 |
| CDX99361 | Canola | cytosol | 8.73 | 43.84 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 9.96 | 41.95 |
| VIT_01s0010g03760.t01 | Wine grape | cytosol | 46.52 | 41.74 |
| Bra034258.1-P | Field mustard | cytosol | 34.65 | 41.03 |
| VIT_16s0050g02590.t01 | Wine grape | cytosol | 41.47 | 40.92 |
| Bra020957.1-P | Field mustard | cytosol | 11.46 | 40.78 |
| CDX76475 | Canola | cytosol | 11.46 | 40.78 |
| KRH18160 | Soybean | nucleus | 42.7 | 40.6 |
| CDX76994 | Canola | nucleus | 32.2 | 40.55 |
| PGSC0003DMT400023514 | Potato | cytosol | 40.65 | 40.54 |
| KRH16532 | Soybean | cytosol | 42.02 | 40.0 |
| CDY35353 | Canola | cytosol | 33.83 | 39.81 |
| PGSC0003DMT400059130 | Potato | cytosol | 41.61 | 39.2 |
| VIT_12s0057g00710.t01 | Wine grape | cytosol | 36.97 | 39.05 |
| KRH09248 | Soybean | nucleus | 41.47 | 39.02 |
| Solyc03g007280.2.1 | Tomato | cytosol | 10.37 | 38.97 |
| CDY49460 | Canola | nucleus | 34.65 | 38.96 |
| KRH14137 | Soybean | nucleus | 37.38 | 38.76 |
| Solyc01g044270.2.1 | Tomato | cytosol | 41.06 | 38.69 |
| CDY19683 | Canola | cytosol | 36.56 | 38.67 |
| KRH73997 | Soybean | nucleus | 36.97 | 38.44 |
| AT2G25560.1 | Thale cress | cytosol | 34.24 | 38.26 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 38.88 | 38.2 |
| Bra003079.1-P | Field mustard | cytosol | 36.7 | 37.94 |
| KRH38748 | Soybean | nucleus | 42.02 | 37.93 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 39.15 | 37.71 |
| CDY27107 | Canola | nucleus | 17.74 | 35.52 |
| PGSC0003DMT400085016 | Potato | cytosol | 6.28 | 35.38 |
| Bra007790.1-P | Field mustard | nucleus | 28.51 | 35.3 |
| CDY11521 | Canola | nucleus | 28.51 | 35.3 |
| CDX99362 | Canola | nucleus | 13.64 | 35.09 |
| CDY12382 | Canola | nucleus | 17.46 | 34.97 |
| VIT_17s0000g01150.t01 | Wine grape | nucleus | 42.16 | 34.88 |
| CDX74632 | Canola | cytosol | 27.83 | 34.75 |
| Bra035378.1-P | Field mustard | cytosol | 32.61 | 34.74 |
| CDX76752 | Canola | nucleus | 29.33 | 34.73 |
| PGSC0003DMT400039476 | Potato | nucleus | 38.06 | 34.66 |
| CDX76474 | Canola | cytosol | 11.32 | 34.58 |
| KRH54176 | Soybean | nucleus | 37.38 | 34.55 |
| CDY47298 | Canola | cytosol | 27.42 | 34.42 |
| PGSC0003DMT400015678 | Potato | nucleus | 36.83 | 34.26 |
| CDY09330 | Canola | cytosol | 10.5 | 34.22 |
| Bra038959.1-P | Field mustard | nucleus | 17.87 | 34.03 |
| CDY60893 | Canola | cytosol | 7.37 | 33.96 |
| CDY60894 | Canola | cytosol | 7.37 | 33.96 |
| CDX76473 | Canola | cytosol | 11.19 | 33.88 |
| Solyc07g047690.1.1 | Tomato | nucleus | 36.43 | 33.88 |
| KRH63773 | Soybean | nucleus | 37.52 | 33.83 |
| AT5G35753.1 | Thale cress | cytosol | 19.78 | 33.8 |
| PGSC0003DMT400048481 | Potato | cytosol | 36.02 | 33.72 |
| AT5G53150.3 | Thale cress | cytosol | 34.65 | 33.64 |
| CDY15046 | Canola | nucleus | 31.51 | 33.48 |
| Bra013179.1-P | Field mustard | nucleus | 31.65 | 33.48 |
| CDX93081 | Canola | nucleus | 31.65 | 33.48 |
| AT2G05230.1 | Thale cress | cytosol | 32.2 | 33.43 |
| AT2G05250.1 | Thale cress | cytosol | 32.2 | 33.43 |
| Solyc05g040050.1.1 | Tomato | nucleus | 35.61 | 33.33 |
| CDY60890 | Canola | cytosol | 10.91 | 33.06 |
| AT5G50115.1 | Thale cress | cytosol | 21.69 | 32.78 |
| CDX78942 | Canola | cytosol | 13.1 | 31.37 |
| AT5G37380.6 | Thale cress | nucleus | 18.01 | 30.63 |
| Solyc03g019640.1.1 | Tomato | nucleus | 37.93 | 29.92 |
| CDX99360 | Canola | cytosol | 13.51 | 29.73 |
| Bra020955.1-P | Field mustard | cytosol | 11.32 | 29.43 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 8.73 | 29.09 |
| PGSC0003DMT400092645 | Potato | cytosol | 4.91 | 27.91 |
| Bra020956.1-P | Field mustard | nucleus | 13.23 | 27.79 |
| CDY12569 | Canola | cytosol | 13.37 | 27.37 |
| Bra040300.1-P | Field mustard | cytosol | 13.64 | 27.1 |
| PGSC0003DMT400086295 | Potato | mitochondrion | 8.05 | 27.06 |
| AT4G19580.1 | Thale cress | cytosol | 10.91 | 25.64 |
| AT5G62780.1 | Thale cress | cytosol | 6.55 | 23.19 |
| PGSC0003DMT400092668 | Potato | cytosol | 4.5 | 22.3 |
| Solyc01g057650.1.1 | Tomato | cytosol | 5.18 | 22.22 |
| Bra013403.1-P | Field mustard | nucleus | 16.37 | 22.14 |
| PGSC0003DMT400094007 | Potato | extracellular, plasma membrane | 8.59 | 22.11 |
| CDX78941 | Canola | nucleus | 16.37 | 21.74 |
| Bra013404.1-P | Field mustard | nucleus | 12.96 | 21.3 |
| AT4G19570.1 | Thale cress | nucleus | 15.96 | 20.97 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 25.38 | 18.16 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 23.33 | 17.52 |
| Solyc07g039220.1.1 | Tomato | cytosol | 8.32 | 17.28 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 15.01 | 17.11 |
| PGSC0003DMT400080343 | Potato | cytosol | 14.32 | 17.02 |
| Solyc01g057750.1.1 | Tomato | cytosol | 14.32 | 16.94 |
| PGSC0003DMT400096427 | Potato | cytosol | 13.64 | 16.26 |
| TraesCS5D01G508400.1 | Wheat | plastid | 7.91 | 16.25 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 24.01 | 16.01 |
| TraesCS3D01G434400.1 | Wheat | cytosol | 15.96 | 15.81 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 24.83 | 15.27 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 15.55 | 13.21 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.19 | 11.11 |
| Bra002184.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G283100.2 | EnsemblPlantsGene:TraesCS2D01G283100 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PANTHER:PTHR44137:SF3 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:355986206..355988407
Molecular Weight (calculated)
82229.1 Da
IEP (calculated)
8.310
GRAVY (calculated)
-0.669
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVEYNMDEA LKARNTAESK FHARDLRGAR KYAVKAQNLC PSLEGISQMA STLEVHLAAE SKIDGESDWY RILSLPAFAD EEDVKKQYRK LALQLHPDKN
101: KSVGAEEAFK LISEAWSVLS DTSRKTIYDQ KRSDHSVVNV TNGMYTYDKK ATKRARKNAA AAAAAAAAAA AAAEATARPA GVDTFWTSCN RCRMQYEYLR
201: MYLNHNLLCP NCHHAFMAVE TGFPCNGSSS SFSWSTKQQP QNHSSTKHSY GSTSRTSSIP GTGHVGYQQD STYDSYNSQS FQWNQYSKTA PAADTNAYST
301: QASEKPRRNE ESYSYNYPES GNTCDPERTT SRRGRFAKRR RHSNDYTTVD YAGDNKETVV ASTETNAFTD VGRVNGTSVE KMRSAVSVRR ANVLREISQI
401: DTRGLLVEKA KEAVRGKLQE LSMAACSRFA EKRKSEGKVY PSDNNIKANG VLSGKLGKGL KLCSSISVDT HIPAAATDEK NPEQKRVPVS IDVPDPDFHD
501: FDKDRTERAF YSDQVWATYD SEDGMPRLYA MVQKVLSMRP FRIRMSFLNS KSNIELSPIN WVASGFQKTC GDFRVGRYQI TETVNIFSHK VSWTKGPRGI
601: IRIIPQKGDT WALYRDWSPD WNELTPDDVI YKYEIVEVID DFTEEQGLTV IPLLKVAGFK AVFHRHMDPK EVRRIPKGEL FRFSHQVPSR LLTGEEGNNA
701: PEGCHELDPA ATPVDLLKVI TEVNEDVVAQ TAE
101: KSVGAEEAFK LISEAWSVLS DTSRKTIYDQ KRSDHSVVNV TNGMYTYDKK ATKRARKNAA AAAAAAAAAA AAAEATARPA GVDTFWTSCN RCRMQYEYLR
201: MYLNHNLLCP NCHHAFMAVE TGFPCNGSSS SFSWSTKQQP QNHSSTKHSY GSTSRTSSIP GTGHVGYQQD STYDSYNSQS FQWNQYSKTA PAADTNAYST
301: QASEKPRRNE ESYSYNYPES GNTCDPERTT SRRGRFAKRR RHSNDYTTVD YAGDNKETVV ASTETNAFTD VGRVNGTSVE KMRSAVSVRR ANVLREISQI
401: DTRGLLVEKA KEAVRGKLQE LSMAACSRFA EKRKSEGKVY PSDNNIKANG VLSGKLGKGL KLCSSISVDT HIPAAATDEK NPEQKRVPVS IDVPDPDFHD
501: FDKDRTERAF YSDQVWATYD SEDGMPRLYA MVQKVLSMRP FRIRMSFLNS KSNIELSPIN WVASGFQKTC GDFRVGRYQI TETVNIFSHK VSWTKGPRGI
601: IRIIPQKGDT WALYRDWSPD WNELTPDDVI YKYEIVEVID DFTEEQGLTV IPLLKVAGFK AVFHRHMDPK EVRRIPKGEL FRFSHQVPSR LLTGEEGNNA
701: PEGCHELDPA ATPVDLLKVI TEVNEDVVAQ TAE
001: MECNKDEAKR AMDIAERKMT EKDYTGAKKF ANKAQNLFPE LDGLKQLFVA INVYISGEKT FAGEADWYGV LGVDPFASDE ALKKQYRKLV LMLHPDKNKC
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
101: KGAEGAFNLV AEAWALLSDK DKRILYNVKR GKDVKAAQQR FPTTQREIPS HQPTSNGIPN VREHVVSSAR ARYKPATRKP AARMDRSRTG SPAFVYPTQE
201: SSTFWTMCNK CDTQYEYQRV YLNQTLLCPH CHHGFVAEEK TPPTNIPKPP VNISSNQHHR SSKNQASNKN SNGSSYRREP ATSVNHNFQW DSSRMGGSYS
301: RNATNETANV VQQGQDKLKR VFWETQEREA ARGFTNSDLG NFKRQKTDDS HMRGPSAGKL SNQIGASRSS TPFYAANENT ESSNTIGSRH PYVQALLRSD
401: IKKALMDRGQ SEIFKRLPMM IAKMEGKVNP TEGEKNSTKA MSSKASEVER SKMSSTANEV ERSVEVIPHE SDEVKEIVVP DSDFHNFDLD RSESAFKDDQ
501: IWAAYDDADG MPRFYARIQK VISVNPFKLK ISWLNSKTTS EFGPIDWMGA GFAKSCGDFR CGRYESTDTL NAFSHSVDFT KGARGLLHIL PKKGQVWALY
601: RNWSPEWDKN TPDEVKHKYE MVEVLDDYTE DDQSLTVALL LKAEGFRVVF RRCTEKLGVR KIAKEEMLRF SHQVPHYILT GKEADNAPEG FLELDPAATP
701: CAFSSENAEA DEKSEAVKEN EQGEAVKENE ESEALKENEE SEAVKENEEV GMDLD
Arabidopsis Description
DnaJ heat shock amino-terminal domain protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.