Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G441600.4 | Wheat | cytosol | 94.19 | 92.56 |
| TraesCS3B01G475500.1 | Wheat | cytosol | 93.38 | 91.77 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 87.97 | 87.03 |
| Os01t0927400-01 | Rice | cytosol | 51.35 | 60.8 |
| KXG34037 | Sorghum | cytosol | 62.43 | 60.31 |
| Zm00001d042269_P001 | Maize | cytosol | 59.86 | 58.14 |
| VIT_14s0068g01140.t01 | Wine grape | cytosol | 32.16 | 31.65 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 24.73 | 18.75 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 25.0 | 18.07 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 24.73 | 16.65 |
| TraesCS2D01G283100.2 | Wheat | cytosol | 15.81 | 15.96 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 18.51 | 15.87 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 24.46 | 15.18 |
| TraesCS4D01G315600.1 | Wheat | cytosol | 15.54 | 15.11 |
| TraesCS3D01G541800.1 | Wheat | cytosol | 15.0 | 14.88 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 10.95 | 12.6 |
| TraesCS5D01G508400.1 | Wheat | plastid | 5.54 | 11.48 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 6.08 | 8.33 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G434400.1 | EnsemblPlantsGene:TraesCS3D01G434400 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 | PFAM:PF11926 | PFscan:PS50076 |
| SEG:seg | SUPFAM:SSF46565 | TIGR:cd06257 | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3D:-:546815770..546819890
Molecular Weight (calculated)
83180.1 Da
IEP (calculated)
5.203
GRAVY (calculated)
-0.344
Length
740 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGDGEAAR EAIAARMRAG DYTGARTLLL ETLQTNPGLD GAVEMLAVLE VLCAAPAGRP PHWYRALQVL PGDGAAAIEA RHRALLAQLE PVRDALPGAD
101: LALRLVDEAY KVLSDPAKRA SFDSSNTAGG LVKQMAAGAF SSAHADLRRD PISLTERMHV DGSATPLGTN PDMDRAKSLD TKHVRQIDQQ FLDAGNCSNV
201: ASSSKTKRTD HCFQGDDGEF ELHEENHADK KLKSVWEKDV YSVSSSEEDP DGCFADLSDA MQDDPCSSQQ YDYHNFEEDR LIQQFATGQI WAGYDWEKFP
301: RRYARINKVL TDKMQLYVSW FKPCPQSHEE KNWLSASLPF VCGTFIAEDR QISLSSICMF SHEISRDTLN QQLEVFPRQG EVWAIYSDWD IGWCNNPEMR
401: KKSAFSVVEI LTSYSEESGC TVAPLVKVGG FRSVFQRYMR SGREQVLQVC SDNLLMFSHR IPLFRFTHEA GTVLELEHSI VPENLRHQNT LASVTPLSPL
501: SGLDSDTNGF HEAAMAQFSS ASTSNLGSGI SQQGVMNYNN KLSPEDFMEG QIWAVYDARD RMPRSYVRII HVVSDATIFV LKLEPHPMLN EEIRWVEDGL
601: PVACGVFRAG TGTTYKDISA FSHPVQCDWS SKKSFYRIFP KKGEIWAMYK NWKITLNSTD IDKCEPRMVE ILSDYTDENG VNVCSLTRVK GCLSFFQRAL
701: LEGFHLTRFL VGYIFSWTLL FFWLRLVESS LDGESHQLHC
101: LALRLVDEAY KVLSDPAKRA SFDSSNTAGG LVKQMAAGAF SSAHADLRRD PISLTERMHV DGSATPLGTN PDMDRAKSLD TKHVRQIDQQ FLDAGNCSNV
201: ASSSKTKRTD HCFQGDDGEF ELHEENHADK KLKSVWEKDV YSVSSSEEDP DGCFADLSDA MQDDPCSSQQ YDYHNFEEDR LIQQFATGQI WAGYDWEKFP
301: RRYARINKVL TDKMQLYVSW FKPCPQSHEE KNWLSASLPF VCGTFIAEDR QISLSSICMF SHEISRDTLN QQLEVFPRQG EVWAIYSDWD IGWCNNPEMR
401: KKSAFSVVEI LTSYSEESGC TVAPLVKVGG FRSVFQRYMR SGREQVLQVC SDNLLMFSHR IPLFRFTHEA GTVLELEHSI VPENLRHQNT LASVTPLSPL
501: SGLDSDTNGF HEAAMAQFSS ASTSNLGSGI SQQGVMNYNN KLSPEDFMEG QIWAVYDARD RMPRSYVRII HVVSDATIFV LKLEPHPMLN EEIRWVEDGL
601: PVACGVFRAG TGTTYKDISA FSHPVQCDWS SKKSFYRIFP KKGEIWAMYK NWKITLNSTD IDKCEPRMVE ILSDYTDENG VNVCSLTRVK GCLSFFQRAL
701: LEGFHLTRFL VGYIFSWTLL FFWLRLVESS LDGESHQLHC
001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS
Arabidopsis Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.