Factsheet for TraesCS5D01G508400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G365000.1	Wheat	cytosol	72.55	95.22
TraesCS5B01G508500.1	Wheat	cytosol	71.71	93.09
HORVU5Hr1G116070.3	Barley	cytosol	62.18	86.72
Os03t0831000-00	Rice	plastid	50.14	68.85
KXG37199	Sorghum	cytosol	47.34	61.68
Zm00001d034749_P001	Maize	plastid	44.54	56.58
GSMUA_Achr3P24140_001	Banana	nucleus	31.93	49.57
GSMUA_Achr1P24750_001	Banana	cytosol	27.17	39.43
CDY08035	Canola	cytosol	10.36	37.37
KRH50796	Soybean	cytosol, nucleus, peroxisome	23.25	33.33
KRH12028	Soybean	cytosol	24.09	31.85
KRH37055	Soybean	cytosol	24.09	31.85
KRH02299	Soybean	cytosol	23.81	31.72
CDY34931	Canola	cytosol	19.61	31.11
AT3G06778.1	Thale cress	cytosol	19.89	31.0
CDX74082	Canola	cytosol	19.61	30.97
Solyc01g065570.2.1	Tomato	cytosol	20.17	30.25
Bra001216.1-P	Field mustard	cytosol	19.05	30.09
Bra040290.1-P	Field mustard	cytosol, mitochondrion	15.13	29.67
PGSC0003DMT400003010	Potato	nucleus	20.73	29.13
VIT_05s0077g01780.t01	Wine grape	nucleus	16.53	27.06
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	3.08	16.92
TraesCS2D01G283100.2	Wheat	cytosol	16.25	7.91
TraesCS3D01G541800.1	Wheat	cytosol	14.29	6.84
TraesCS4D01G315600.1	Wheat	cytosol	14.57	6.83
TraesCS6D01G155600.1	Wheat	cytosol	16.81	6.15
TraesCS3D01G215900.1	Wheat	nucleus	16.53	5.76
TraesCS3D01G434400.1	Wheat	cytosol	11.48	5.54
TraesCS1D01G042900.1	Wheat	nucleus	17.93	5.37
TraesCS2D01G082800.1	Wheat	nucleus	16.25	5.28
TraesCS2D01G078000.1	Wheat	cytosol	5.6	3.11
TraesCS2D01G077700.1	Wheat	cytosol	6.72	2.78
TraesCS2D01G077900.1	Wheat	cytosol	4.2	2.78

Protein Annotations

EnsemblPlants:TraesCS5D01G508400.1	EnsemblPlantsGene:TraesCS5D01G508400	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2

Description

No Description!

Coordinates

chr5D:+:533630504..533632265

Molecular Weight (calculated)

39425.3 Da

IEP (calculated)

11.158

GRAVY (calculated)

-0.844

Length

357 amino acids

Sequence
(BLAST)

001: MHPQSPLFPA PLLRPPRNRP SRSHSLSPRS PPHPTPPGAQ VTPIKTSLHA PTSCLTRDHS YTRACSALLR RTSIDPSTGP ATSMADAAGK AQAARDVCAA
101: SAAFASCPHR RRSPRRAHFV DWYLVLAIGE AASEDAIKRR YRHLALQLHP DKNRHPKAEV AFKLVSEAHA CLTDKARRRA FDAERATAFC AACHDRARAA
201: TTPCAPTRRR ASDRRTPASS EAASAQQQHN KARGSVAKQQ GGGRRRPPSP TTQALREVQN RLRDECRVID GCLRANAAGA RRRQSFPLFD PSDRQRFPDY
301: PHARPPPSFA ECRPFEEEEE LGAGHGHQSW CTNGSCESPV YQVRTAPERA ARTNRPW

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.