Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P24140_001 | Banana | nucleus | 46.34 | 49.57 |
| CDY08035 | Canola | cytosol | 18.7 | 46.46 |
| Os03t0831000-00 | Rice | plastid | 43.5 | 41.15 |
| CDY34931 | Canola | cytosol | 35.37 | 38.67 |
| CDX74082 | Canola | cytosol | 34.15 | 37.17 |
| Bra001216.1-P | Field mustard | cytosol | 33.74 | 36.73 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 38.21 | 36.72 |
| AT3G06778.1 | Thale cress | cytosol | 34.15 | 36.68 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 36.99 | 36.55 |
| KXG37199 | Sorghum | cytosol | 40.65 | 36.5 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 39.43 | 35.27 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 38.62 | 34.93 |
| Zm00001d034749_P001 | Maize | plastid | 39.43 | 34.52 |
| KRH02299 | Soybean | cytosol | 37.4 | 34.33 |
| KRH37055 | Soybean | cytosol | 37.4 | 34.07 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 25.2 | 34.07 |
| KRH12028 | Soybean | cytosol | 36.99 | 33.7 |
| Solyc01g065570.2.1 | Tomato | cytosol | 31.3 | 32.35 |
| PGSC0003DMT400003010 | Potato | nucleus | 31.71 | 30.71 |
| TraesCS5D01G508400.1 | Wheat | plastid | 39.43 | 27.17 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 23.58 | 26.61 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 5.28 | 20.0 |
| GSMUA_Achr10P... | Banana | cytosol | 21.95 | 8.81 |
| GSMUA_Achr4P05630_001 | Banana | cytosol | 17.07 | 8.37 |
| GSMUA_Achr8P00660_001 | Banana | cytosol | 19.92 | 8.14 |
| GSMUA_Achr6P12230_001 | Banana | nucleus | 17.89 | 7.59 |
| GSMUA_Achr11P... | Banana | nucleus | 18.7 | 7.03 |
| GSMUA_Achr2P21160_001 | Banana | cytosol | 14.63 | 6.69 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 19.92 | 6.33 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 17.89 | 6.05 |
| GSMUA_Achr11P... | Banana | cytosol | 11.38 | 5.58 |
| GSMUA_Achr3P02570_001 | Banana | nucleus | 10.57 | 4.97 |
| GSMUA_Achr11P... | Banana | cytosol | 4.07 | 4.37 |
| GSMUA_Achr11P... | Banana | cytosol | 2.44 | 3.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P24750_001 | EnsemblPlants:GSMUA_Achr1T24750_001 | EnsemblPlantsGene:GSMUA_Achr1G24750_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PFAM:PF00226 | PFscan:PS50076 |
| PFscan:PS51257 | PRINTS:PR00625 | ScanProsite:PS00636 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0002966B9F |
| UniProt:M0S2T2 | MapMan:35.2 | : | : | : | : |
Description
heat shock protein DnaJ, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G24750_001]
Coordinates
chr1:+:19221562..19223309
Molecular Weight (calculated)
28648.0 Da
IEP (calculated)
9.535
GRAVY (calculated)
-0.913
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MARQPREETD SKAQLVREIC STGSMFAACT HRRRPPAFVD WYLVLGVDEE EKVDAIRKRY RQLALQLHPD KNKHPKADVA FKLVSEAYEC LSDKAKRNAF
101: NSQRWSNLCK ECYRRSRSKE HVHRQRCWQS TGQASSYKVM NNLRQMQKRF REECEVIESC MRANQSYWKE SPVFSPYEQL LSSPGYPHSR GATLEKPMSS
201: SHWQARDQCG RGAGCESPIY EIRKHNYPRS VGVEDHTRKL AACALL
101: NSQRWSNLCK ECYRRSRSKE HVHRQRCWQS TGQASSYKVM NNLRQMQKRF REECEVIESC MRANQSYWKE SPVFSPYEQL LSSPGYPHSR GATLEKPMSS
201: SHWQARDQCG RGAGCESPIY EIRKHNYPRS VGVEDHTRKL AACALL
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.