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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92583 Canola mitochondrion, plastid 21.82 10.37
AT5G18720.3 Thale cress extracellular, golgi 20.0 9.65
GSMUA_Achr5P00460_001 Banana cytosol 23.64 5.36
GSMUA_Achr2P02410_001 Banana cytosol 23.64 5.04
GSMUA_Achr11P... Banana nucleus 14.55 3.67
GSMUA_Achr1P24750_001 Banana cytosol 3.64 2.44
GSMUA_Achr11P... Banana cytosol 2.42 1.75
GSMUA_Achr3P24140_001 Banana nucleus 1.82 1.3
CDX92584 Canola mitochondrion 1.82 0.86
GSMUA_Achr4P05630_001 Banana cytosol 2.42 0.8
GSMUA_Achr2P21160_001 Banana cytosol 2.42 0.74
GSMUA_Achr10P... Banana cytosol 2.42 0.65
GSMUA_Achr3P02570_001 Banana nucleus 1.82 0.57
GSMUA_Achr11P... Banana cytosol 0.61 0.2
GSMUA_Achr6P12230_001 Banana nucleus 0.61 0.17
GSMUA_Achr8P00660_001 Banana cytosol 0.61 0.17
Protein Annotations
EnsemblPlants:GSMUA_Achr11P10820_001EnsemblPlants:GSMUA_Achr11T10820_001EnsemblPlantsGene:GSMUA_Achr11G10820_001InterPro:DUF3444PANTHER:PTHR10825PANTHER:PTHR10825:SF4
PFAM:PF11926SEG:segUniParc:UPI000294C5DFUniProt:M0RR62MapMan:35.2:
Description
heat shock protein DnaJ, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G10820_001]
Coordinates
chr11:-:8581793..8582290
Molecular Weight (calculated)
18975.8 Da
IEP (calculated)
7.463
GRAVY (calculated)
-0.164
Length
165 amino acids
Sequence
(BLAST)
001: MIDEEIQWVE ENLPLACGIF RAGNVGNLDM SRFSHIVKCD SSKKQSFYRI FPKKGEIWAA YKNWNNNWKD FNFVGFLCQV VEILSDFSKE SGTSICSLVE
101: VEGCVTFFVR KLHEGFQLTK QLQRLEMLSF SHGIPTFTVV GIKNHAIPKG SWHLELDALP PRWSN
Best Arabidopsis Sequence Match ( AT5G18740.1 )
(BLAST)
001: MMDDTVNELL RRKKAVLNHQ IKSDLVASTL ANHQEKPQAF SLLQQKDVQT KSPGTHFSNC AVKVGEKRKR NECGGICNTE NRSMTEDVVN LSKDRNVDSK
101: RSAFSDNGDA TQEFGSGKQL PEVDCSKDPM SNAQVGAVVG NSRNLEVDQN SGLCDSESGG VVPQKISGFA GLKFNDFDKL REEVNFEVGQ TWAIFDPVDG
201: MPRLYAKIIK VSAPCFGLRI TYLEPDPDGE KELQWFEEDL PVSVGNFRLG ENKCTQDRSI FSHVIHCNEL SNTLCFSVTC RFINTCHFSV SPREGETWAL
301: FKNWDIKWSS EPDSHRKYEY EFVEILSDYA DEAGVYVAYL HKAKGFASVF LRMGTGYEGI FRILPRSLYR FSHRVPSFKL TGVKGKDMPK DAYELDQAAL
401: PETIEEIIVP SNSESNIKSK RQAIYIASKG
Arabidopsis Description
Domain of unknown function (DUF3444) [Source:TAIR;Acc:AT5G18740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.