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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • extracellular 5
  • peroxisome 1
  • vacuole 4
  • plastid 2
  • plasma membrane 4
  • golgi 5
  • nucleus 1
  • endoplasmic reticulum 3
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92583 Canola mitochondrion, plastid 44.44 43.8
AT5G18730.1 Thale cress cytosol 58.19 37.69
GSMUA_Achr11P... Banana cytosol 9.65 20.0
GSMUA_Achr11P... Banana cytosol 8.19 12.23
AT5G18750.1 Thale cress nucleus 30.12 11.65
AT5G18740.1 Thale cress nucleus 12.87 10.23
AT5G27240.1 Thale cress nucleus 21.64 6.7
AT3G04980.2 Thale cress nucleus 20.18 5.83
AT5G35753.1 Thale cress cytosol 5.85 4.66
AT3G06340.4 Thale cress cytosol 7.89 4.01
AT5G50115.1 Thale cress cytosol 5.26 3.71
AT3G05110.1 Thale cress nucleus 3.51 3.23
CDX92584 Canola mitochondrion 3.22 3.15
AT4G27980.2 Thale cress cytosol 5.26 2.99
AT3G04960.3 Thale cress cytosol 5.26 2.98
AT5G53150.3 Thale cress cytosol 6.43 2.91
AT2G25560.1 Thale cress cytosol 5.56 2.9
AT2G05250.1 Thale cress cytosol 5.56 2.69
AT2G05230.1 Thale cress cytosol 5.56 2.69
AT2G35540.1 Thale cress nucleus 4.39 2.54
AT5G37440.1 Thale cress cytosol 1.75 2.09
AT5G37750.1 Thale cress cytosol 1.46 2.07
AT5G62780.1 Thale cress cytosol 1.17 1.93
AT5G37760.1 Thale cress cytosol 0.88 1.45
AT4G19570.1 Thale cress nucleus 2.34 1.43
AT3G06778.1 Thale cress cytosol 0.58 0.87
AT5G37380.6 Thale cress nucleus 0.58 0.46
AT4G19580.1 Thale cress cytosol 0.29 0.32
AT4G19590.2 Thale cress nucleus 0.29 0.27
Protein Annotations
ArrayExpress:AT5G18720EnsemblPlants:AT5G18720.3EnsemblPlantsGene:AT5G18720EntrezGene:831990GO:GO:0003674GO:GO:0008150
InterPro:DUF3444PANTHER:PTHR45089PFAM:PF11926ProteinID:ABE65554.1ProteinID:AED92602.1ProteinID:AED92603.1
ProteinID:ANM70973.1RefSeq:AT5G18720RefSeq:AT5G18720-TAIR-GRefSeq:NP_001154718.1RefSeq:NP_001332539.1RefSeq:NP_197373.4
TAIR:AT5G18720Unigene:At.54906UniParc:UPI0000D5BD14UniProt:Q3E9E2MapMan:35.2:
Description
DNAJ heat shock amino-terminal domain protein, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:Q3E9E2]
Coordinates
chr5:+:6243982..6246325
Molecular Weight (calculated)
39343.6 Da
IEP (calculated)
6.000
GRAVY (calculated)
-0.146
Length
342 amino acids
Sequence
(BLAST)
001: MSMNLSRFCQ ITLMKLVYML HTCIKQKDLL VCSFEWEEVM KVYFVFYLRV CIGSPIGFLP LTGIEGKGVP KDAYELDKAA LPETIEEFIV PLDSESNIKS
101: KRQDIYFASK GNVFLTGQIW SFYCGDDSLP LYYGRIQKIT FTQAFMQDPV CKLHIGRLKA TRFPADVIDW ENKGTPVGCG TFYARKALEI ITPSEVSLQI
201: TPQTSIDGIE YTILPKIGEV WVIYKYWSRD MDAEDFSFAS YNIVEILDDT LEYKVQLLKH DPFYKDHKKE NTLLRAVKKN ESWEMEGSGS YIPTYTIPKR
301: ERIRFSNKVP ASRVTIEMYG ELVDLISVDS RALPSHLIAS DH
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.