Factsheet for AT2G05230.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G05250.1	Thale cress	cytosol	100.0	100.0
CDY15046	Canola	nucleus	82.29	84.2
Bra013179.1-P	Field mustard	nucleus	82.15	83.69
CDX93081	Canola	nucleus	82.15	83.69
AT5G35753.1	Thale cress	cytosol	44.62	73.43
KRH73997	Soybean	nucleus	51.84	51.91
KRH14137	Soybean	nucleus	51.84	51.77
VIT_12s0057g00710.t01	Wine grape	cytosol	50.57	51.44
Solyc07g047690.1.1	Tomato	nucleus	48.73	43.65
Solyc05g040050.1.1	Tomato	nucleus	46.6	42.02
GSMUA_Achr8P00660_001	Banana	cytosol	31.16	36.54
TraesCS3A01G536400.1	Wheat	cytosol	34.56	32.88
TraesCS3B01G607500.1	Wheat	cytosol	34.42	32.75
GSMUA_Achr2P21160_001	Banana	cytosol	24.93	32.71
AT5G37750.1	Thale cress	cytosol	11.05	32.37
TraesCS3D01G541800.1	Wheat	cytosol	34.14	32.31
Os02t0510000-01	Rice	cytosol	33.57	32.29
GSMUA_Achr11P...	Banana	cytosol	22.95	32.27
TraesCS2A01G284200.2	Wheat	cytosol	33.43	32.2
TraesCS2D01G283100.2	Wheat	cytosol	33.43	32.2
AT2G25560.1	Thale cress	cytosol	29.89	32.16
EES10633	Sorghum	cytosol	33.43	32.11
Zm00001d003948_P001	Maize	cytosol	33.29	31.93
PGSC0003DMT400092645	Potato	cytosol	5.81	31.78
OQU85000	Sorghum	cytosol	32.58	31.59
TraesCS2B01G301100.1	Wheat	cytosol	31.59	31.59
GSMUA_Achr3P02570_001	Banana	nucleus	23.23	31.36
Zm00001d025238_P001	Maize	cytosol	32.58	31.34
GSMUA_Achr10P...	Banana	cytosol	27.2	31.32
GSMUA_Achr6P12230_001	Banana	nucleus	25.64	31.21
HORVU1Hr1G001860.1	Barley	nucleus	19.26	30.91
Os03t0401200-01	Rice	cytosol	32.44	30.61
EES10933	Sorghum	cytosol	31.3	30.52
TraesCS5A01G493100.1	Wheat	cytosol	32.86	30.49
EES07899	Sorghum	cytosol	31.73	30.48
Zm00001d025584_P001	Maize	cytosol	31.59	30.42
Zm00001d025585_P001	Maize	cytosol	31.44	30.29
TraesCS4D01G315600.1	Wheat	cytosol	32.44	30.09
Zm00001d050565_P001	Maize	cytosol	26.91	29.5
TraesCS4B01G319100.1	Wheat	cytosol	28.75	28.51
Os04t0388800-01	Rice	nucleus	24.08	28.43
TraesCS3B01G470100.1	Wheat	nucleus	28.9	28.1
AT5G50115.1	Thale cress	cytosol	19.26	28.04
AT5G53150.3	Thale cress	cytosol	29.75	27.81
AT5G37440.1	Thale cress	cytosol	11.19	27.53
Os01t0923800-01	Rice	nucleus	27.9	26.48
TraesCS3A01G435100.1	Wheat	nucleus	28.75	25.66
Zm00001d011997_P001	Maize	nucleus	29.6	25.43
KXG34016	Sorghum	nucleus	29.46	25.09
AT2G35540.1	Thale cress	nucleus	20.54	24.58
AT3G06340.4	Thale cress	cytosol	23.09	24.22
AT5G37380.6	Thale cress	nucleus	14.73	24.13
AT4G19590.2	Thale cress	nucleus	12.75	24.06
AT3G06778.1	Thale cress	cytosol	7.79	24.02
AT4G19580.1	Thale cress	cytosol	9.63	21.79
AT5G18740.1	Thale cress	nucleus	13.03	21.4
AT5G37760.1	Thale cress	cytosol	6.23	21.26
AT3G05110.1	Thale cress	nucleus	10.34	19.62
AT5G62780.1	Thale cress	cytosol	5.67	19.32
AT4G19570.1	Thale cress	nucleus	14.73	18.64
AT3G04960.3	Thale cress	cytosol	15.16	17.69
AT5G18750.1	Thale cress	nucleus	22.1	17.65
AT5G18730.1	Thale cress	cytosol	11.19	14.96
AT4G27980.2	Thale cress	cytosol	12.32	14.43
AT5G27240.1	Thale cress	nucleus	22.52	14.4
AT3G04980.2	Thale cress	nucleus	23.37	13.95
AT5G18720.3	Thale cress	extracellular, golgi	2.69	5.56

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EntrezGene:815071	EntrezGene:815073	ProteinID:AAD29061.1	ProteinID:AAD29062.1
ProteinID:AEC05909.1	ProteinID:AEC05910.1	EMBL:AK229446	ArrayExpress:AT2G05230	EnsemblPlantsGene:AT2G05230	RefSeq:AT2G05230
TAIR:AT2G05230	RefSeq:AT2G05230-TAIR-G	EnsemblPlants:AT2G05230.1	TAIR:AT2G05230.1	EMBL:AY056805	Unigene:At.14247
EMBL:BT001092	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	RefSeq:NP_565321.1	RefSeq:NP_565322.1	PFAM:PF00226	PFAM:PF11926	PO:PO:0000293
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44137	PANTHER:PTHR44137:SF2	UniProt:Q9S7L6
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00000AC2C8	SEG:seg	:	:

Description

At2g05250/F5G3.15 [Source:UniProtKB/TrEMBL;Acc:Q9S7L6]

Coordinates

chr2:-:1899468..1902825

Molecular Weight (calculated)

79027.1 Da

IEP (calculated)

8.928

GRAVY (calculated)

-0.577

Length

706 amino acids

Sequence
(BLAST)

001: MEAYREEALR VKQIAERRFA EKDFTSARSY ALKAKSLFPD LEGLSQMVAT FEVYLASQTR SGGQIDYYAV LGLKPSAGKR EVKKQYKKMA VLLHPDKNKC
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.